RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 DPF2Q92785 391 aa13.02□□□□□ -0.33
AC012339.1-201ENST00000505564 TAF1DQ9H5J8 278 aaPredicted RBP13.02□□□□□ -0.33
AC012339.1-201ENST00000505564 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
AC012339.1-201ENST00000505564 ADARB2Q9NS39 739 aaKnown RBP13.02□□□□□ -0.33
AC012339.1-201ENST00000505564 CNOT7Q9UIV1 285 aaKnown RBP13.02□□□□□ -0.33
AC012339.1-201ENST00000505564 MYO3BQ8WXR4 1341 aa13.02□□□□□ -0.33
AC012339.1-201ENST00000505564 COL4A5P29400 1685 aa13.02□□□□□ -0.33
AC012339.1-201ENST00000505564 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 SURF6O75683 361 aaKnown RBP13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 VIL1P09327 827 aaKnown RBP13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 HSP90AB4PQ58FF6 505 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 STRIP1Q5VSL9 837 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 RSBN1LQ6PCB5 846 aaPredicted RBP13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 USP50Q70EL3 339 aaPredicted RBP13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 TXNRD3Q86VQ6 643 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 LDHDQ86WU2 507 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 PCDHGA4Q9Y5G9 962 aa13.01□□□□□ -0.33
AC012339.1-201ENST00000505564 POTECB2RU33 542 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 KLRK1P26718 216 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 EPS15P42566 896 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 GYG1P46976 350 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 MMP14P50281 582 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 SCNN1DP51172 638 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 GTF2IP78347 998 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 PPP1R15BQ5SWA1 713 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 GORABQ5T7V8 394 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 C20orf194Q5TEA3 1177 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 CEP85Q6P2H3 762 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 SSH3Q8TE77 659 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 KCNQ5Q9NR82 932 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
AC012339.1-201ENST00000505564 SASH1O94885 1247 aa12.99□□□□□ -0.33
AC012339.1-201ENST00000505564 USP17L8P0C7I0 530 aa12.99□□□□□ -0.33
AC012339.1-201ENST00000505564 IL1R1P14778 569 aa12.99□□□□□ -0.33
AC012339.1-201ENST00000505564 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
AC012339.1-201ENST00000505564 VGLL2Q8N8G2 317 aa12.99□□□□□ -0.33
AC012339.1-201ENST00000505564 HDAC9Q9UKV0 1011 aa12.99□□□□□ -0.33
AC012339.1-201ENST00000505564 SCN4AP35499 1836 aa12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 HTRA3P83110 453 aa12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 TFCP2Q12800 502 aa12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 LARP6Q9BRS8 491 aaKnown RBP12.98□□□□□ -0.33
AC012339.1-201ENST00000505564 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 FGFR2P21802 821 aa12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 DACT2Q5SW24 774 aa12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 FBXO33Q7Z6M2 555 aa12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 TDRD7Q8NHU6 1098 aaKnown RBP12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 TBC1D22AQ8WUA7 517 aa12.97□□□□□ -0.33
AC012339.1-201ENST00000505564 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 A0A1B0GUL7 405 aa12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 BCAMP50895 628 aa12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 CHAF1AQ13111 956 aaPredicted RBP12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 TBC1D10BQ4KMP7 808 aaPredicted RBP12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 ZC3H15Q8WU90 426 aaKnown RBP12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 DDX27Q96GQ7 796 aaKnown RBP12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 NOP58Q9Y2X3 529 aaKnown RBP12.96□□□□□ -0.33
AC012339.1-201ENST00000505564 SEMA3EO15041 775 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 TBC1D12O60347 775 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 NUDT7P0C024 238 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 TIMM10P62072 90 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 AAMPQ13685 434 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 KIF4BQ2VIQ3 1234 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 KIAA0825Q8IV33 1275 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 WDR66Q8TBY9 1149 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 DCPSQ96C86 337 aaKnown RBP12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 IQSEC3Q9UPP2 1182 aaPredicted RBP12.95□□□□□ -0.34
AC012339.1-201ENST00000505564 FAM205AQ6ZU69 1335 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 RAB11FIP3O75154 756 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 RBM5P52756 815 aaKnown RBP eCLIP12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 ZNF280AP59817 542 aaPredicted RBP12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 MFSD10Q14728 455 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 CCDC158Q5M9N0 1113 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 SAMD7Q7Z3H4 446 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 XAGE2Q96GT9 111 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 GPR108Q9NPR9 543 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 DENND2AQ9ULE3 1009 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 JAG2Q9Y219 1238 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 ZNF609O15014 1411 aa12.94□□□□□ -0.34
AC012339.1-201ENST00000505564 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
AC012339.1-201ENST00000505564 MYO1BO43795 1136 aa12.93□□□□□ -0.34
AC012339.1-201ENST00000505564 DLGAP5Q15398 846 aa12.93□□□□□ -0.34
AC012339.1-201ENST00000505564 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms