RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ZAP70P43403 619 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 RHBDL3P58872 404 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 DOK7Q18PE1 504 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 CCDC158Q5M9N0 1113 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 ANKRD45Q5TZF3 282 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 GNL3LQ9NVN8 582 aaKnown RBP10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 MAST3O60307 1309 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 APOBEC3HQ6NTF7 200 aaKnown RBP10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 ADGRA1Q86SQ6 560 aa10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 TMX4Q9H1E5 349 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE2-208ENST00000505065 USP50Q70EL3 339 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 PI16Q6UXB8 463 aa10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 ZC3H15Q8WU90 426 aaKnown RBP10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 IDI2Q9BXS1 227 aa10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 PAG1Q9NWQ8 432 aa10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 HIRAP54198 1017 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 TTLL5Q6EMB2 1281 aa10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 CERS3Q8IU89 383 aa10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 IFIT2P09913 472 aaKnown RBP10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 ANTXR1Q9H6X2 564 aa10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 PASKQ96RG2 1323 aa10.12□□□□□ -0.79
CDC42SE2-208ENST00000505065 RIMBP2O15034 1052 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 ZMYM1Q5SVZ6 1142 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 EVI5LQ96CN4 794 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 MYH4Q9Y623 1939 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 SPDYE2BA6NHP3 402 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 KIF3CO14782 793 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 ERC2O15083 957 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 EPB41L2O43491 1005 aaKnown RBP10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 SPDYE6P0CI01 402 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 GMPSP49915 693 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 MECOMQ03112 1051 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 SPDYE2Q495Y8 402 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 TTC39AQ5SRH9 613 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 KCNJ4P48050 445 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 SPTY2D1Q68D10 685 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 LNPKQ9C0E8 428 aa10.11□□□□□ -0.79
CDC42SE2-208ENST00000505065 JDP2Q8WYK2 163 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 ADARB2Q9NS39 739 aaKnown RBP10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 PRDX5P30044 214 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 TAF1DQ9H5J8 278 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 RBBP6Q7Z6E9 1792 aaKnown RBP10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 RAD50Q92878 1312 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 GTF2IP78347 998 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 DAGLAQ9Y4D2 1042 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 KCNB2Q92953 911 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 MXD3Q9BW11 206 aa10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE2-208ENST00000505065 NEFLP07196 543 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 ZFYP08048 801 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 MFSD14BQ5SR56 506 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 TEPSINQ96N21 525 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 MYOZ2Q9NPC6 264 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 PPP2R3BQ9Y5P8 575 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 SHTN1A0MZ66 631 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 FGRP09769 529 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 B4GALNT3Q6L9W6 998 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 WWC3Q9ULE0 1092 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 EGFRP00533 1210 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 PDE6AP16499 860 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 OS9Q13438 667 aaPredicted RBP10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 GIMAP6Q6P9H5 292 aa10.09□□□□□ -0.79
CDC42SE2-208ENST00000505065 DDNO94850 711 aaPredicted RBP10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 SDSP20132 328 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 ALX1Q15699 326 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 FAM83AQ86UY5 434 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 CCDC136Q96JN2 1154 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 HELLSQ9NRZ9 838 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 USP17L8P0C7I0 530 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 CRKP46108 304 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 NEUROD6Q96NK8 337 aa10.08□□□□□ -0.8
CDC42SE2-208ENST00000505065 WNT10BO00744 389 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 WDHD1O75717 1129 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 RAD17O75943 681 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 GSTO1P78417 241 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 MAP3K11Q16584 847 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 TRPM4Q8TD43 1214 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 PLIN4Q96Q06 1357 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 CNOT7Q9UIV1 285 aaKnown RBP10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 HACL1Q9UJ83 578 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 UNCXA6NJT0 531 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 RNF113AO15541 343 aaKnown RBP10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 NOVP48745 357 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 MICALL2Q8IY33 904 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 IQCA1LA6NCM1 817 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 APPBP2Q92624 585 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 IL25Q9H293 177 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 FAM198AQ9UFP1 575 aa10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-208ENST00000505065 ERICH6Q7L0X2 663 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 EDC3Q96F86 508 aaKnown RBP10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 ANAPC4Q9UJX5 808 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 TBC1D12O60347 775 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 CHMLP26374 656 aa10.06□□□□□ -0.8
CDC42SE2-208ENST00000505065 EPS15P42566 896 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms