RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 SMARCA5O60264 1052 aaPredicted RBP10.64□□□□□ -0.71
CASC9-201ENST00000504531 BMP2P12643 396 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 ZNF445P59923 1031 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 ERVK-9P63128 1117 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 XPCQ01831 940 aaPredicted RBP10.64□□□□□ -0.71
CASC9-201ENST00000504531 KSR2Q6VAB6 950 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 PHTF2Q8N3S3 785 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 ZFP42Q96MM3 310 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 PURBQ96QR8 312 aaKnown RBP10.64□□□□□ -0.71
CASC9-201ENST00000504531 GRPEL1Q9HAV7 217 aa10.64□□□□□ -0.71
CASC9-201ENST00000504531 BTBD11A6QL63 1104 aa10.63□□□□□ -0.71
CASC9-201ENST00000504531 ADH1AP07327 375 aa10.63□□□□□ -0.71
CASC9-201ENST00000504531 C1orf141Q5JVX7 400 aa10.63□□□□□ -0.71
CASC9-201ENST00000504531 DEFB132Q7Z7B7 95 aa10.63□□□□□ -0.71
CASC9-201ENST00000504531 RHPN1Q8TCX5 695 aa10.63□□□□□ -0.71
CASC9-201ENST00000504531 EXOC6BQ9Y2D4 811 aa10.63□□□□□ -0.71
CASC9-201ENST00000504531 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
CASC9-201ENST00000504531 POTECB2RU33 542 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 HIP1O00291 1037 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 GLRX3O76003 335 aaKnown RBP10.62□□□□□ -0.71
CASC9-201ENST00000504531 DDX58O95786 925 aaKnown RBP10.62□□□□□ -0.71
CASC9-201ENST00000504531 HSPA4P34932 840 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
CASC9-201ENST00000504531 PPP1R42Q7Z4L9 355 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 CNTROBQ8N137 903 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 LINS1Q8NG48 757 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 RUFY2Q8WXA3 655 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 KCNB2Q92953 911 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 DOLKQ9UPQ8 538 aa10.62□□□□□ -0.71
CASC9-201ENST00000504531 SOS2Q07890 1332 aaPredicted RBP10.61□□□□□ -0.71
CASC9-201ENST00000504531 ALS2Q96Q42 1657 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 POM121CA8CG34 1229 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 SGSM2O43147 1006 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 MBD3O95983 291 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 MYCP01106 439 aaPredicted RBP10.61□□□□□ -0.71
CASC9-201ENST00000504531 HS1BP3Q53T59 392 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 PI4K2BQ8TCG2 481 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 GPATCH3Q96I76 525 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 CCDC85AQ96PX6 553 aaPredicted RBP10.61□□□□□ -0.71
CASC9-201ENST00000504531 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 LGR6Q9HBX8 967 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 DDX21Q9NR30 783 aaKnown RBP eCLIP10.61□□□□□ -0.71
CASC9-201ENST00000504531 C1orf167Q5SNV9 1468 aa10.61□□□□□ -0.71
CASC9-201ENST00000504531 PI4KAP2A4QPH2 592 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 SURF6O75683 361 aaKnown RBP10.6□□□□□ -0.71
CASC9-201ENST00000504531 BRD1O95696 1058 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 SSFA2P28290 1259 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 ADD1P35611 737 aaKnown RBP10.6□□□□□ -0.71
CASC9-201ENST00000504531 NEK4P51957 841 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 CYP2U1Q7Z449 544 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 PI4KAP1Q8N8J0 262 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 PHAXQ9H814 394 aaKnown RBP10.6□□□□□ -0.71
CASC9-201ENST00000504531 LMBRD1Q9NUN5 540 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 ADCY9O60503 1353 aa10.6□□□□□ -0.71
CASC9-201ENST00000504531 NPHP3Q7Z494 1330 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 RAD50Q92878 1312 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 ATP5J2-PTCD1G3V325 749 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 SPINT1O43278 529 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 SRGAP3O43295 1099 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 RELBQ01201 579 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 USP4Q13107 963 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 KRT28Q7Z3Y7 464 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 UNC5CLQ8IV45 518 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 CLASRPQ8N2M8 674 aaKnown RBP10.59□□□□□ -0.71
CASC9-201ENST00000504531 NFATC2IPQ8NCF5 419 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 ANKRD24Q8TF21 1146 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 PPP1R9BQ96SB3 815 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 ALDH8A1Q9H2A2 487 aaPredicted RBP10.59□□□□□ -0.71
CASC9-201ENST00000504531 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 DDX49Q9Y6V7 483 aaKnown RBP10.59□□□□□ -0.71
CASC9-201ENST00000504531 MRC1P22897 1456 aa10.59□□□□□ -0.71
CASC9-201ENST00000504531 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
CASC9-201ENST00000504531 SCN11AQ9UI33 1791 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 SNRPBP14678 240 aaKnown RBP10.58□□□□□ -0.72
CASC9-201ENST00000504531 PTGIRP43119 386 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 CCDC173Q0VFZ6 552 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 NUTM2GQ5VZR2 741 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.72
CASC9-201ENST00000504531 PLPP7Q8NBV4 271 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 LTV1Q96GA3 475 aaPredicted RBP10.58□□□□□ -0.72
CASC9-201ENST00000504531 SPG7Q9UQ90 795 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 AK9Q5TCS8 1911 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 ATRNO75882 1429 aa10.58□□□□□ -0.72
CASC9-201ENST00000504531 RGPD2P0DJD1 1756 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 CPDO75976 1380 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 RFX7Q2KHR2 1363 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 LZTS3O60299 673 aaPredicted RBP10.57□□□□□ -0.72
CASC9-201ENST00000504531 NBPF7P0C2Y1 421 aaPredicted RBP10.57□□□□□ -0.72
CASC9-201ENST00000504531 SCTRP47872 440 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 KIAA1211Q6ZU35 1233 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 TMEM87AQ8NBN3 555 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 ANP32BQ92688 251 aaKnown RBP10.57□□□□□ -0.72
CASC9-201ENST00000504531 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 ZSCAN31Q96LW9 406 aaPredicted RBP10.57□□□□□ -0.72
CASC9-201ENST00000504531 AGBL1Q96MI9 1066 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 ANO2Q9NQ90 1003 aa10.57□□□□□ -0.72
CASC9-201ENST00000504531 ECHDC1Q9NTX5 307 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms