RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CELA3AP09093 270 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 MCM4P33991 863 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 COPS2P61201 443 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 TUBB8Q3ZCM7 444 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 INTS6LQ5JSJ4 861 aaKnown RBP6.45□□□□□ -1.38
NIPBL-204ENST00000504430 ZDHHC1Q8WTX9 485 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 HOOK2Q96ED9 719 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 TMEM74Q96NL1 305 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 KCTD15Q96SI1 283 aaPredicted RBP6.45□□□□□ -1.38
NIPBL-204ENST00000504430 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.45□□□□□ -1.38
NIPBL-204ENST00000504430 GRM2Q14416 872 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 SETDB1Q15047 1291 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TPTE2Q6XPS3 522 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 KRT26Q7Z3Y9 468 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 GPKOWQ92917 476 aaPredicted RBP eCLIP6.44□□□□□ -1.38
NIPBL-204ENST00000504430 RELTQ969Z4 430 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 ZFRQ96KR1 1074 aaKnown RBP6.44□□□□□ -1.38
NIPBL-204ENST00000504430 ASAP1Q9ULH1 1129 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 FAM86C2PA6NEL3 165 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 IFIT2P09913 472 aaKnown RBP6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TNFAIP3P21580 790 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 HALP42357 657 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TRIP4Q15650 581 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-204ENST00000504430 RGL3Q3MIN7 710 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 LVRNQ6Q4G3 990 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 MORC1Q86VD1 984 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TEX19Q8NA77 164 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 C3orf58Q8NDZ4 430 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TMEM63CQ9P1W3 806 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TCEA3O75764 348 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 FAM153BP0C7A2 387 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TM4SF20Q53R12 229 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 GPR101Q96P66 508 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-204ENST00000504430 TARS2Q9BW92 718 aaKnown RBP6.44□□□□□ -1.38
NIPBL-204ENST00000504430 AASDHPPTQ9NRN7 309 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 ACTR10Q9NZ32 417 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 POLG2Q9UHN1 485 aa6.44□□□□□ -1.38
NIPBL-204ENST00000504430 NEK2P51955 445 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 FOXK2Q01167 660 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 CNNM4Q6P4Q7 775 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 CASC1Q6TDU7 716 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 NOL7Q9UMY1 257 aaKnown RBP6.43□□□□□ -1.38
NIPBL-204ENST00000504430 EREGO14944 169 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 RASGRF1Q13972 1273 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 MLC1Q15049 377 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 CTC1Q2NKJ3 1217 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 FOXB2Q5VYV0 432 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 BNC2Q6ZN30 1099 aaPredicted RBP6.43□□□□□ -1.38
NIPBL-204ENST00000504430 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 FNIP2Q9P278 1114 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 METRNQ9UJH8 293 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 NUB1Q9Y5A7 615 aa6.43□□□□□ -1.38
NIPBL-204ENST00000504430 APAF1O14727 1248 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 RASGRP1O95267 797 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 FCGRTP55899 365 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 PSMA6P60900 246 aaKnown RBP6.42□□□□□ -1.38
NIPBL-204ENST00000504430 ZNF622Q969S3 477 aaKnown RBP eCLIP6.42□□□□□ -1.384e-7■■□□□ 11.5
NIPBL-204ENST00000504430 SPSB2Q99619 263 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 CCDC113Q9H0I3 377 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 CDH19Q9H159 772 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 AKAP2Q9Y2D5 859 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 EML1O00423 815 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 BACH1O14867 736 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 HSP90AA1P07900 732 aaKnown RBP6.42□□□□□ -1.38
NIPBL-204ENST00000504430 GARTP22102 1010 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 PPM1FP49593 454 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-204ENST00000504430 NBPF1Q3BBV0 1214 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 LRRC69Q6ZNQ3 347 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 ZSCAN30Q86W11 494 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 RELL1Q8IUW5 271 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 KMT5AQ9NQR1 393 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 RABGAP1Q9Y3P9 1069 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 NEXNQ0ZGT2 675 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 YOD1Q5VVQ6 348 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-204ENST00000504430 BPHLQ86WA6 291 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-204ENST00000504430 HSCBQ8IWL3 235 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 KIAA1958Q8N8K9 716 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 ZNF511Q8NB15 262 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 TTC16Q8NEE8 873 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 THAP3Q8WTV1 239 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-204ENST00000504430 LEO1Q8WVC0 666 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-204ENST00000504430 RHOVQ96L33 236 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 SEZ6LQ9BYH1 1024 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 ZMYM5Q9UJ78 669 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 PCDHB3Q9Y5E6 796 aa6.42□□□□□ -1.38
NIPBL-204ENST00000504430 hCG_1642624A0A1W2PR95 340 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 ZNF784Q8NCA9 323 aaPredicted RBP6.41□□□□□ -1.38
NIPBL-204ENST00000504430 L3MBTL2Q969R5 705 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 MYO19Q96H55 970 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 PHACTR1Q9C0D0 580 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 ANTXR1Q9H6X2 564 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 IP6K2Q9UHH9 426 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 PABPC4Q13310 644 aaKnown RBP eCLIP6.41□□□□□ -1.38
NIPBL-204ENST00000504430 ARID5BQ14865 1188 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 KIFC2Q96AC6 838 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 MFSD3Q96ES6 412 aa6.41□□□□□ -1.38
NIPBL-204ENST00000504430 TRMT2BQ96GJ1 504 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms