RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH11X-208	ENST00000504220	TSPY26P	Q9H489	355 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RGPD4	Q7Z3J3	1758 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220		G3V3G9	751 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	IPO5	O00410	1097 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	HOXD11	P31277	338 aa	Predicted RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	MAP2K2	P36507	400 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	DDR1	Q08345	913 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	LONRF3	Q496Y0	759 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	DCAF8	Q5TAQ9	597 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ARL10	Q8N8L6	244 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	MIGA1	Q8NAN2	632 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	EPAS1	Q99814	870 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CHCHD3	Q9NX63	227 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	TMOD4	Q9NZQ9	345 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SLC30A1	Q9Y6M5	507 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	BRWD3	Q6RI45	1802 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SSH2	Q76I76	1423 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	FAM208A	Q9UK61	1670 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CAMTA1	Q9Y6Y1	1673 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	GLI3	P10071	1580 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	MME	P08473	750 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	FUT4	P22083	530 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	FLT3	P36888	993 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PLOD1	Q02809	727 aa	Predicted RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RRS1	Q15050	365 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	FXN	Q16595	210 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CLPP	Q16740	277 aa	Predicted RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	MMS22L	Q6ZRQ5	1243 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	KRT28	Q7Z3Y7	464 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	NME9	Q86XW9	330 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	OR8K1	Q8NGG5	319 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	FSD1	Q9BTV5	496 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	OCEL1	Q9H607	264 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PYCARD	Q9ULZ3	195 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SLIT2	O94813	1529 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	TNS3	Q68CZ2	1445 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	KIF20B	Q96Q89	1820 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PARP4	Q9UKK3	1724 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	EIF3CL	B5ME19	914 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	UBTFL1	P0CB47	393 aa	Predicted RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CHRNA2	Q15822	529 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RRP12	Q5JTH9	1297 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CLASRP	Q8N2M8	674 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	EIF3C	Q99613	913 aa	Known RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PHACTR1	Q9C0D0	580 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	GPCPD1	Q9NPB8	672 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	MIS18A	Q9NYP9	233 aa		4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RGS17	Q9UGC6	210 aa	Predicted RBP	4.24	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ATRN	O75882	1429 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PDE4B	Q07343	736 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	C1orf141	Q5JVX7	400 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CCDC181	Q5TID7	509 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	KRT222	Q8N1A0	295 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	DDX11	Q96FC9	970 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	QTRT2	Q9H974	415 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PNMA2	Q9UL42	364 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ZSCAN23	Q3MJ62	389 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RNF20	Q5VTR2	975 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	HHAT	Q5VTY9	493 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	LEKR1	Q6ZMV7	388 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RALYL	Q86SE5	291 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RSPH1	Q8WYR4	309 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CCDC85A	Q96PX6	553 aa	Predicted RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RUFY1	Q96T51	708 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	GNL3L	Q9NVN8	582 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	NLRP2	Q9NX02	1062 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RBM27	Q9P2N5	1060 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ACE	P12821	1306 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PEAK1	Q9H792	1746 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	TNS1	Q9HBL0	1735 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	NEFH	P12036	1026 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	HNRNPH1	P31943	449 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RWDD2B	P57060	319 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	GNAI1	P63096	354 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	TWISTNB	Q3B726	338 aa	Predicted RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SLFNL1	Q499Z3	407 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	LARP1B	Q659C4	914 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	RIC3	Q7Z5B4	369 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SAMD3	Q8N6K7	520 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CCDC112	Q8NEF3	446 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CAGE1	Q8TC20	777 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SLC16A10	Q8TF71	515 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CENPH	Q9H3R5	247 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ZCCHC17	Q9NP64	241 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	TRMT1	Q9NXH9	659 aa	Known RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	PCDHGC5	Q9Y5F6	944 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220	KAT6B	Q8WYB5	2073 aa		4.23	□□□□□ -1.73
PCDH11X-208	ENST00000504220		A0A1B0GUL7	405 aa		4.22	□□□□□ -1.73
PCDH11X-208	ENST00000504220		K7ELQ4	463 aa	Predicted RBP	4.22	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ZEB2	O60315	1214 aa		4.22	□□□□□ -1.73
PCDH11X-208	ENST00000504220	ME1	P48163	572 aa		4.22	□□□□□ -1.73
PCDH11X-208	ENST00000504220	SARNP	P82979	210 aa	Known RBP	4.22	□□□□□ -1.73

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