RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 BHLHE41Q9C0J9 482 aaPredicted RBP8.22□□□□□ -1.09
UBE3D-205ENST00000503942 A6NHS1 94 aa8.21□□□□□ -1.1
UBE3D-205ENST00000503942 ATG7O95352 703 aa8.21□□□□□ -1.1
UBE3D-205ENST00000503942 ADH5P11766 374 aa8.21□□□□□ -1.1
UBE3D-205ENST00000503942 DNM1Q05193 864 aaKnown RBP8.21□□□□□ -1.1
UBE3D-205ENST00000503942 LCE4AQ5TA78 99 aa8.21□□□□□ -1.1
UBE3D-205ENST00000503942 NRSN2Q9GZP1 204 aa8.21□□□□□ -1.1
UBE3D-205ENST00000503942 ZC3H7BQ9UGR2 993 aaKnown RBP8.21□□□□□ -1.1
UBE3D-205ENST00000503942 EDN3P14138 238 aa8.2□□□□□ -1.1
UBE3D-205ENST00000503942 HELQQ8TDG4 1101 aa8.2□□□□□ -1.1
UBE3D-205ENST00000503942 SLAIN2Q9P270 581 aa8.2□□□□□ -1.1
UBE3D-205ENST00000503942 EIF4EBP3O60516 100 aaPredicted RBP8.19□□□□□ -1.1
UBE3D-205ENST00000503942 MZF1P28698 734 aaPredicted RBP8.19□□□□□ -1.1
UBE3D-205ENST00000503942 CYP27A1Q02318 531 aa8.19□□□□□ -1.1
UBE3D-205ENST00000503942 C8orf34Q49A92 452 aa8.19□□□□□ -1.1
UBE3D-205ENST00000503942 DUSP27Q5VZP5 1158 aa8.19□□□□□ -1.1
UBE3D-205ENST00000503942 TTC16Q8NEE8 873 aa8.19□□□□□ -1.1
UBE3D-205ENST00000503942 LRRC4CQ9HCJ2 640 aa8.19□□□□□ -1.1
UBE3D-205ENST00000503942 ACTL7BQ9Y614 415 aa8.19□□□□□ -1.1
UBE3D-205ENST00000503942 EREGO14944 169 aa8.18□□□□□ -1.1
UBE3D-205ENST00000503942 PDIA4P13667 645 aaKnown RBP8.18□□□□□ -1.1
UBE3D-205ENST00000503942 GSTM4Q03013 218 aa8.18□□□□□ -1.1
UBE3D-205ENST00000503942 MAP7Q14244 749 aa8.18□□□□□ -1.1
UBE3D-205ENST00000503942 ZNF765Q7L2R6 523 aa8.18□□□□□ -1.1
UBE3D-205ENST00000503942 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
UBE3D-205ENST00000503942 TRAIPQ9BWF2 469 aa8.18□□□□□ -1.1
UBE3D-205ENST00000503942 CARNS1A5YM72 827 aa8.17□□□□□ -1.1
UBE3D-205ENST00000503942 NFICP08651 508 aa8.17□□□□□ -1.1
UBE3D-205ENST00000503942 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
UBE3D-205ENST00000503942 ZNF648Q5T619 568 aaPredicted RBP8.17□□□□□ -1.1
UBE3D-205ENST00000503942 WFDC3Q8IUB2 231 aa8.17□□□□□ -1.1
UBE3D-205ENST00000503942 SEMA6CQ9H3T2 930 aa8.17□□□□□ -1.1
UBE3D-205ENST00000503942 PHACTR2O75167 634 aa8.16□□□□□ -1.1
UBE3D-205ENST00000503942 TNFRSF21O75509 655 aa8.16□□□□□ -1.1
UBE3D-205ENST00000503942 RAB6AP20340 208 aa8.16□□□□□ -1.1
UBE3D-205ENST00000503942 NOM1Q5C9Z4 860 aaKnown RBP8.16□□□□□ -1.1
UBE3D-205ENST00000503942 SNX29Q8TEQ0 813 aa8.16□□□□□ -1.1
UBE3D-205ENST00000503942 BCL7CQ8WUZ0 217 aaPredicted RBP8.16□□□□□ -1.1
UBE3D-205ENST00000503942 SLC5A6Q9Y289 635 aa8.16□□□□□ -1.1
UBE3D-205ENST00000503942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
UBE3D-205ENST00000503942 TMEM88BA6NKF7 163 aa8.15□□□□□ -1.1
UBE3D-205ENST00000503942 BIN1O00499 593 aa8.15□□□□□ -1.1
UBE3D-205ENST00000503942 PLCL1Q15111 1095 aa8.15□□□□□ -1.1
UBE3D-205ENST00000503942 ZNF792Q3KQV3 632 aa8.15□□□□□ -1.1
UBE3D-205ENST00000503942 PEAR1Q5VY43 1037 aaPredicted RBP8.15□□□□□ -1.1
UBE3D-205ENST00000503942 ACSS3Q9H6R3 686 aa8.15□□□□□ -1.1
UBE3D-205ENST00000503942 CARMIL2Q6F5E8 1435 aa8.14□□□□□ -1.11
UBE3D-205ENST00000503942 EIF1AXP47813 144 aaKnown RBP8.14□□□□□ -1.11
UBE3D-205ENST00000503942 ZNF574Q6ZN55 896 aaPredicted RBP8.14□□□□□ -1.11
UBE3D-205ENST00000503942 STK11IPQ8N1F8 1099 aa8.14□□□□□ -1.11
UBE3D-205ENST00000503942 LATS2Q9NRM7 1088 aa8.14□□□□□ -1.11
UBE3D-205ENST00000503942 FAM105AQ9NUU6 356 aa8.14□□□□□ -1.11
UBE3D-205ENST00000503942 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
UBE3D-205ENST00000503942 METTL12A8MUP2 240 aa8.13□□□□□ -1.11
UBE3D-205ENST00000503942 MPSTP25325 297 aa8.13□□□□□ -1.11
UBE3D-205ENST00000503942 MAOBP27338 520 aa8.13□□□□□ -1.11
UBE3D-205ENST00000503942 HP1BP3Q5SSJ5 553 aaPredicted RBP8.13□□□□□ -1.11
UBE3D-205ENST00000503942 USTQ9Y2C2 406 aa8.13□□□□□ -1.11
UBE3D-205ENST00000503942 DBX1A6NMT0 343 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 CTSBP07858 339 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 ZNF124Q15973 351 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 SEZ6L2Q6UXD5 910 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 SPOCD1Q6ZMY3 1216 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 DYMQ7RTS9 669 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 SPRED2Q7Z698 418 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 C1GALT1Q9NS00 363 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
UBE3D-205ENST00000503942 TRIM26Q12899 539 aaPredicted RBP8.11□□□□□ -1.11
UBE3D-205ENST00000503942 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
UBE3D-205ENST00000503942 GSX1Q9H4S2 264 aaPredicted RBP8.11□□□□□ -1.11
UBE3D-205ENST00000503942 FOXD3Q9UJU5 478 aaPredicted RBP8.11□□□□□ -1.11
UBE3D-205ENST00000503942 AMOTL2Q9Y2J4 779 aa8.11□□□□□ -1.11
UBE3D-205ENST00000503942 CYP11A1P05108 521 aa8.1□□□□□ -1.11
UBE3D-205ENST00000503942 PCDH1Q08174 1060 aa8.1□□□□□ -1.11
UBE3D-205ENST00000503942 AKAP4Q5JQC9 854 aa8.1□□□□□ -1.11
UBE3D-205ENST00000503942 OGFOD3Q6PK18 319 aa8.1□□□□□ -1.11
UBE3D-205ENST00000503942 MISP3Q96FF7 219 aa8.1□□□□□ -1.11
UBE3D-205ENST00000503942 CLEC4MQ9H2X3 399 aaPredicted RBP8.1□□□□□ -1.11
UBE3D-205ENST00000503942 AP4E1Q9UPM8 1137 aa8.1□□□□□ -1.11
UBE3D-205ENST00000503942 DYNC1LI2O43237 492 aaPredicted RBP8.09□□□□□ -1.11
UBE3D-205ENST00000503942 FARP2O94887 1054 aaPredicted RBP8.09□□□□□ -1.11
UBE3D-205ENST00000503942 EHHADHQ08426 723 aa8.09□□□□□ -1.11
UBE3D-205ENST00000503942 POU4F3Q15319 338 aa8.09□□□□□ -1.11
UBE3D-205ENST00000503942 ZNF423Q2M1K9 1284 aa8.09□□□□□ -1.11
UBE3D-205ENST00000503942 ALKBH2Q6NS38 261 aa8.09□□□□□ -1.11
UBE3D-205ENST00000503942 ATG4DQ86TL0 474 aaPredicted RBP8.09□□□□□ -1.11
UBE3D-205ENST00000503942 PDE4CQ08493 712 aa8.08□□□□□ -1.12
UBE3D-205ENST00000503942 GLIS3Q8NEA6 775 aa8.08□□□□□ -1.12
UBE3D-205ENST00000503942 ZFYVE1Q9HBF4 777 aa8.08□□□□□ -1.12
UBE3D-205ENST00000503942 A0A096LPE4 126 aa8.07□□□□□ -1.12
UBE3D-205ENST00000503942 A0A1W2PPZ6 126 aa8.07□□□□□ -1.12
UBE3D-205ENST00000503942 FUT4P22083 530 aa8.07□□□□□ -1.12
UBE3D-205ENST00000503942 ASPAP45381 313 aa8.07□□□□□ -1.12
UBE3D-205ENST00000503942 CCNJLQ8IV13 435 aa8.07□□□□□ -1.12
UBE3D-205ENST00000503942 GTF3C2Q8WUA4 911 aaPredicted RBP8.07□□□□□ -1.12
UBE3D-205ENST00000503942 TRIM56Q9BRZ2 755 aaKnown RBP8.07□□□□□ -1.12
UBE3D-205ENST00000503942 RAD18Q9NS91 495 aa8.07□□□□□ -1.12
UBE3D-205ENST00000503942 DAGLAQ9Y4D2 1042 aa8.07□□□□□ -1.12
UBE3D-205ENST00000503942 USP5P45974 858 aa8.06□□□□□ -1.12
UBE3D-205ENST00000503942 PKN1Q16512 942 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms