RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
VCAN-205ENST00000503923 MTMR14Q8NCE2 650 aa13.58□□□□□ -0.24
VCAN-205ENST00000503923 SMC1BQ8NDV3 1235 aa13.58□□□□□ -0.24
VCAN-205ENST00000503923 MRIQ9BWK5 157 aa13.58□□□□□ -0.24
VCAN-205ENST00000503923 ECHDC1Q9NTX5 307 aa13.58□□□□□ -0.24
VCAN-205ENST00000503923 IGSF3O75054 1194 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 CYP2E1P05181 493 aaPredicted RBP13.57□□□□□ -0.24
VCAN-205ENST00000503923 CRKP46108 304 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 RBM5P52756 815 aaKnown RBP eCLIP13.57□□□□□ -0.24
VCAN-205ENST00000503923 CFAP100Q494V2 611 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 TBC1D9Q6ZT07 1266 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 DZIP1Q86YF9 867 aaKnown RBP13.57□□□□□ -0.24
VCAN-205ENST00000503923 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 LNPKQ9C0E8 428 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 PGAP2Q9UHJ9 254 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 TTC41PQ6P2S7 1318 aa13.57□□□□□ -0.24
VCAN-205ENST00000503923 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 WNT10BO00744 389 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 MX1P20591 662 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 FSTL1Q12841 308 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 TTF1Q15361 905 aaPredicted RBP13.56□□□□□ -0.24
VCAN-205ENST00000503923 HHIPL2Q6UWX4 724 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 ZBED3Q96IU2 234 aaPredicted RBP13.56□□□□□ -0.24
VCAN-205ENST00000503923 DNAJC2Q99543 621 aaKnown RBP13.56□□□□□ -0.24
VCAN-205ENST00000503923 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 RAI14Q9P0K7 980 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 LRP2BPQ9P2M1 347 aa13.56□□□□□ -0.24
VCAN-205ENST00000503923 ERC2O15083 957 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 MYO1BO43795 1136 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 GSTO1P78417 241 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 MAP1SQ66K74 1059 aaPredicted RBP13.55□□□□□ -0.24
VCAN-205ENST00000503923 OTUD7AQ8TE49 926 aaPredicted RBP13.55□□□□□ -0.24
VCAN-205ENST00000503923 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 HAUS7Q99871 368 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 SALL3Q9BXA9 1300 aa13.55□□□□□ -0.24
VCAN-205ENST00000503923 GLRX3O76003 335 aaKnown RBP13.54□□□□□ -0.24
VCAN-205ENST00000503923 MECOMQ03112 1051 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 DIXDC1Q155Q3 683 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
VCAN-205ENST00000503923 TSHZ3Q63HK5 1081 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 DCPSQ96C86 337 aaKnown RBP13.54□□□□□ -0.24
VCAN-205ENST00000503923 NSUN4Q96CB9 384 aaKnown RBP13.54□□□□□ -0.24
VCAN-205ENST00000503923 CCDC136Q96JN2 1154 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 PRMT6Q96LA8 375 aaPredicted RBP13.54□□□□□ -0.24
VCAN-205ENST00000503923 ANTXR1Q9H6X2 564 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 PIH1D3Q9NQM4 214 aaKnown RBP13.54□□□□□ -0.24
VCAN-205ENST00000503923 PAG1Q9NWQ8 432 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 GGA3Q9NZ52 723 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 PCDHAC2Q9Y5I4 1007 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 PITPNM2Q9BZ72 1349 aa13.54□□□□□ -0.24
VCAN-205ENST00000503923 MAST2Q6P0Q8 1798 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 ECM29Q5VYK3 1845 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 MYH2Q9UKX2 1941 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 GOLIM4O00461 696 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 LDHCP07864 332 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 MAP3K12Q12852 859 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 TMED8Q6PL24 325 aaPredicted RBP13.53□□□□□ -0.24
VCAN-205ENST00000503923 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
VCAN-205ENST00000503923 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
VCAN-205ENST00000503923 STAP2Q9UGK3 403 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 ASTN2O75129 1339 aaPredicted RBP13.53□□□□□ -0.24
VCAN-205ENST00000503923 DOCK2Q92608 1830 aa13.53□□□□□ -0.24
VCAN-205ENST00000503923 MYO5AQ9Y4I1 1855 aaKnown RBP13.53□□□□□ -0.24
VCAN-205ENST00000503923 IDH1O75874 414 aaKnown RBP13.52□□□□□ -0.25
VCAN-205ENST00000503923 PDE1AP54750 535 aa13.52□□□□□ -0.25
VCAN-205ENST00000503923 NAA16Q6N069 864 aaPredicted RBP13.52□□□□□ -0.25
VCAN-205ENST00000503923 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.25
VCAN-205ENST00000503923 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
VCAN-205ENST00000503923 APOBEC3FQ8IUX4 373 aaKnown RBP13.52□□□□□ -0.25
VCAN-205ENST00000503923 SULF1Q8IWU6 871 aa13.52□□□□□ -0.25
VCAN-205ENST00000503923 PI4K2BQ8TCG2 481 aa13.52□□□□□ -0.25
VCAN-205ENST00000503923 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
VCAN-205ENST00000503923 GAKO14976 1311 aa13.52□□□□□ -0.25
VCAN-205ENST00000503923 AOX1Q06278 1338 aa13.52□□□□□ -0.25
VCAN-205ENST00000503923 POLR2AP24928 1970 aaKnown RBP13.52□□□□□ -0.25
VCAN-205ENST00000503923 CLRN2A0PK11 232 aa13.51□□□□□ -0.25
VCAN-205ENST00000503923 ITGBL1O95965 494 aaPredicted RBP13.51□□□□□ -0.25
VCAN-205ENST00000503923 C1QTNF8P60827 252 aa13.51□□□□□ -0.25
VCAN-205ENST00000503923 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
VCAN-205ENST00000503923 KRT26Q7Z3Y9 468 aa13.51□□□□□ -0.25
VCAN-205ENST00000503923 ZNF384Q8TF68 577 aa13.51□□□□□ -0.25
VCAN-205ENST00000503923 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
VCAN-205ENST00000503923 GLIS2Q9BZE0 524 aaPredicted RBP13.51□□□□□ -0.25
VCAN-205ENST00000503923 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.51□□□□□ -0.25
VCAN-205ENST00000503923 TDRD3Q9H7E2 651 aaKnown RBP13.51□□□□□ -0.25
VCAN-205ENST00000503923 TMOD2Q9NZR1 351 aa13.51□□□□□ -0.25
VCAN-205ENST00000503923 ZNF70Q9UC06 446 aaPredicted RBP13.51□□□□□ -0.25
VCAN-205ENST00000503923 GPR75-ASB3A0A0A6YYF3 556 aa13.5□□□□□ -0.25
VCAN-205ENST00000503923 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
VCAN-205ENST00000503923 PLEKHM2Q8IWE5 1019 aa13.5□□□□□ -0.25
VCAN-205ENST00000503923 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms