RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
TRIO-205ENST00000503399 TMEM39BQ9GZU3 492 aa16.5■□□□□ 0.23
TRIO-205ENST00000503399 BRCA2P51587 3418 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 GRM8O00222 908 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 VAMP4O75379 141 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 MYCP01106 439 aaPredicted RBP16.49■□□□□ 0.23
TRIO-205ENST00000503399 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
TRIO-205ENST00000503399 CRKP46108 304 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 TNNI2P48788 182 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
TRIO-205ENST00000503399 ARHGEF6Q15052 776 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 SLC4A8Q2Y0W8 1093 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
TRIO-205ENST00000503399 TDRD7Q8NHU6 1098 aaKnown RBP16.49■□□□□ 0.23
TRIO-205ENST00000503399 ARAP2Q8WZ64 1704 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 C9orf78Q9NZ63 289 aaPredicted RBP16.49■□□□□ 0.23
TRIO-205ENST00000503399 CSADQ9Y600 493 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
TRIO-205ENST00000503399 GTF2A2P52657 109 aa16.48■□□□□ 0.23
TRIO-205ENST00000503399 MAP3K9P80192 1104 aa16.48■□□□□ 0.23
TRIO-205ENST00000503399 UBE4AQ14139 1066 aa16.48■□□□□ 0.23
TRIO-205ENST00000503399 NBPF11Q86T75 865 aa16.48■□□□□ 0.23
TRIO-205ENST00000503399 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
TRIO-205ENST00000503399 ZNF333Q96JL9 665 aa16.48■□□□□ 0.23
TRIO-205ENST00000503399 TEPSINQ96N21 525 aa16.48■□□□□ 0.23
TRIO-205ENST00000503399 IQSEC3Q9UPP2 1182 aaPredicted RBP16.48■□□□□ 0.23
TRIO-205ENST00000503399 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
TRIO-205ENST00000503399 SLC4A10Q6U841 1118 aa16.47■□□□□ 0.23
TRIO-205ENST00000503399 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
TRIO-205ENST00000503399 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
TRIO-205ENST00000503399 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.23
TRIO-205ENST00000503399 CACNB3P54284 484 aa16.46■□□□□ 0.23
TRIO-205ENST00000503399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRIO-205ENST00000503399 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
TRIO-205ENST00000503399 PUS3Q9BZE2 481 aaKnown RBP16.46■□□□□ 0.23
TRIO-205ENST00000503399 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
TRIO-205ENST00000503399 KIF22Q14807 665 aa16.45■□□□□ 0.22
TRIO-205ENST00000503399 GRIK5Q16478 980 aa16.45■□□□□ 0.22
TRIO-205ENST00000503399 SH3TC2Q8TF17 1288 aa16.44■□□□□ 0.22
TRIO-205ENST00000503399 SUCLG2Q96I99 432 aa16.44■□□□□ 0.22
TRIO-205ENST00000503399 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
TRIO-205ENST00000503399 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
TRIO-205ENST00000503399 TMOD2Q9NZR1 351 aa16.44■□□□□ 0.22
TRIO-205ENST00000503399 ZSWIM8A7E2V4 1837 aa16.44■□□□□ 0.22
TRIO-205ENST00000503399 SPDYE5A6NIY4 337 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 ALDH1L1O75891 902 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 CETPP11597 493 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 FXR1P51114 621 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRIO-205ENST00000503399 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 TEKT1Q969V4 418 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 SRCIN1Q9C0H9 1055 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 SNCAIPQ9Y6H5 919 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
TRIO-205ENST00000503399 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
TRIO-205ENST00000503399 METTL24Q5JXM2 366 aa16.42■□□□□ 0.22
TRIO-205ENST00000503399 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
TRIO-205ENST00000503399 ZKSCAN4Q969J2 545 aaPredicted RBP16.42■□□□□ 0.22
TRIO-205ENST00000503399 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
TRIO-205ENST00000503399 COLQQ9Y215 455 aaPredicted RBP16.42■□□□□ 0.22
TRIO-205ENST00000503399 BTBD19C9JJ37 291 aa16.41■□□□□ 0.22
TRIO-205ENST00000503399 TLR2O60603 784 aa16.41■□□□□ 0.22
TRIO-205ENST00000503399 LACTBP83111 547 aaPredicted RBP16.41■□□□□ 0.22
TRIO-205ENST00000503399 SNAPC2Q13487 334 aa16.41■□□□□ 0.22
TRIO-205ENST00000503399 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
TRIO-205ENST00000503399 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
TRIO-205ENST00000503399 ERO1BQ86YB8 467 aa16.41■□□□□ 0.22
TRIO-205ENST00000503399 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
TRIO-205ENST00000503399 IRF6O14896 467 aa16.4■□□□□ 0.22
TRIO-205ENST00000503399 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
TRIO-205ENST00000503399 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
TRIO-205ENST00000503399 LRRC24Q50LG9 513 aa16.4■□□□□ 0.22
TRIO-205ENST00000503399 HOOK2Q96ED9 719 aa16.4■□□□□ 0.22
TRIO-205ENST00000503399 KAZALD1Q96I82 304 aa16.4■□□□□ 0.22
TRIO-205ENST00000503399 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
TRIO-205ENST00000503399 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
TRIO-205ENST00000503399 DCAF15Q66K64 600 aa16.39■□□□□ 0.21
TRIO-205ENST00000503399 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
TRIO-205ENST00000503399 H0YGN5 161 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 BCAMP50895 628 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 PPIL2Q13356 520 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 MIGA2Q7L4E1 593 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 FAM83AQ86UY5 434 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 ZDHHC15Q96MV8 337 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 CPA4Q9UI42 421 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 MAST3O60307 1309 aa16.38■□□□□ 0.21
TRIO-205ENST00000503399 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
TRIO-205ENST00000503399 ZNF341Q9BYN7 854 aa16.37■□□□□ 0.21
TRIO-205ENST00000503399 PDE8BO95263 885 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 GNRH1P01148 92 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 INPP5BP32019 993 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 PSMC4P43686 418 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 PRMT2P55345 433 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 MTFR1Q15390 333 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 APOBEC3HQ6NTF7 200 aaKnown RBP16.36■□□□□ 0.21
TRIO-205ENST00000503399 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 RPAP1Q9BWH6 1393 aaPredicted RBP16.36■□□□□ 0.21
TRIO-205ENST00000503399 CEP290O15078 2479 aa16.36■□□□□ 0.21
TRIO-205ENST00000503399 PDHXO00330 501 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms