RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 SLF2Q8IX21 1173 aa19.34■□□□□ 0.69
DDR1-248ENST00000503180 GGA3Q9NZ52 723 aa19.34■□□□□ 0.69
DDR1-248ENST00000503180 SPDYE2BA6NHP3 402 aa19.33■□□□□ 0.68
DDR1-248ENST00000503180 SPDYE6P0CI01 402 aa19.33■□□□□ 0.68
DDR1-248ENST00000503180 HHIPL2Q6UWX4 724 aa19.33■□□□□ 0.68
DDR1-248ENST00000503180 ZBED3Q96IU2 234 aaPredicted RBP19.33■□□□□ 0.68
DDR1-248ENST00000503180 PRMT6Q96LA8 375 aaPredicted RBP19.33■□□□□ 0.68
DDR1-248ENST00000503180 GLIS2Q9BZE0 524 aaPredicted RBP19.33■□□□□ 0.68
DDR1-248ENST00000503180 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
DDR1-248ENST00000503180 PASKQ96RG2 1323 aa19.32■□□□□ 0.68
DDR1-248ENST00000503180 ARAP2Q8WZ64 1704 aa19.32■□□□□ 0.68
DDR1-248ENST00000503180 MCAMP43121 646 aa19.32■□□□□ 0.68
DDR1-248ENST00000503180 GRIK5Q16478 980 aa19.32■□□□□ 0.68
DDR1-248ENST00000503180 ERICH6Q7L0X2 663 aa19.32■□□□□ 0.68
DDR1-248ENST00000503180 GCC1Q96CN9 775 aa19.32■□□□□ 0.68
DDR1-248ENST00000503180 TLR7Q9NYK1 1049 aaKnown RBP19.32■□□□□ 0.68
DDR1-248ENST00000503180 ZNF646O15015 1829 aaPredicted RBP19.31■□□□□ 0.68
DDR1-248ENST00000503180 PRDX5P30044 214 aa19.31■□□□□ 0.68
DDR1-248ENST00000503180 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
DDR1-248ENST00000503180 DZIP1Q86YF9 867 aaKnown RBP19.31■□□□□ 0.68
DDR1-248ENST00000503180 APOBEC3FQ8IUX4 373 aaKnown RBP19.31■□□□□ 0.68
DDR1-248ENST00000503180 SNRKQ9NRH2 765 aa19.31■□□□□ 0.68
DDR1-248ENST00000503180 LRP2BPQ9P2M1 347 aa19.31■□□□□ 0.68
DDR1-248ENST00000503180 ASTN2O75129 1339 aaPredicted RBP19.3■□□□□ 0.68
DDR1-248ENST00000503180 TMEM88BA6NKF7 163 aa19.3■□□□□ 0.68
DDR1-248ENST00000503180 IGSF3O75054 1194 aa19.3■□□□□ 0.68
DDR1-248ENST00000503180 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
DDR1-248ENST00000503180 TRAF5O00463 557 aa19.29■□□□□ 0.68
DDR1-248ENST00000503180 SMARCA5O60264 1052 aaPredicted RBP19.29■□□□□ 0.68
DDR1-248ENST00000503180 LDHCP07864 332 aa19.29■□□□□ 0.68
DDR1-248ENST00000503180 GSTO1P78417 241 aa19.29■□□□□ 0.68
DDR1-248ENST00000503180 PI16Q6UXB8 463 aa19.29■□□□□ 0.68
DDR1-248ENST00000503180 TBC1D9Q6ZT07 1266 aa19.29■□□□□ 0.68
DDR1-248ENST00000503180 RAI14Q9P0K7 980 aa19.29■□□□□ 0.68
DDR1-248ENST00000503180 MYH13Q9UKX3 1938 aa19.29■□□□□ 0.68
DDR1-248ENST00000503180 COL1A1P02452 1464 aaPredicted RBP19.28■□□□□ 0.68
DDR1-248ENST00000503180 CENPBP07199 599 aaPredicted RBP19.28■□□□□ 0.68
DDR1-248ENST00000503180 TNFAIP1Q13829 316 aa19.28■□□□□ 0.68
DDR1-248ENST00000503180 GPATCH3Q96I76 525 aa19.28■□□□□ 0.68
DDR1-248ENST00000503180 TDRD3Q9H7E2 651 aaKnown RBP19.28■□□□□ 0.68
DDR1-248ENST00000503180 CREBZFQ9NS37 354 aa19.28■□□□□ 0.68
DDR1-248ENST00000503180 TMOD2Q9NZR1 351 aa19.28■□□□□ 0.68
DDR1-248ENST00000503180 PCDHAC2Q9Y5I4 1007 aa19.28■□□□□ 0.68
DDR1-248ENST00000503180 CLRN2A0PK11 232 aa19.27■□□□□ 0.68
DDR1-248ENST00000503180 ADM5C9JUS6 153 aa19.27■□□□□ 0.68
DDR1-248ENST00000503180 CELF2O95319 508 aaKnown RBP19.27■□□□□ 0.68
DDR1-248ENST00000503180 CYP2E1P05181 493 aaPredicted RBP19.27■□□□□ 0.68
DDR1-248ENST00000503180 ZAP70P43403 619 aa19.27■□□□□ 0.68
DDR1-248ENST00000503180 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.68
DDR1-248ENST00000503180 ANKRD45Q5TZF3 282 aa19.27■□□□□ 0.68
DDR1-248ENST00000503180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.27■□□□□ 0.68
DDR1-248ENST00000503180 FAM163AQ96GL9 167 aaPredicted RBP19.27■□□□□ 0.68
DDR1-248ENST00000503180 ZNF408Q9H9D4 720 aa19.27■□□□□ 0.68
DDR1-248ENST00000503180 VEZTQ9HBM0 779 aa19.27■□□□□ 0.68
DDR1-248ENST00000503180 ZNF70Q9UC06 446 aaPredicted RBP19.27■□□□□ 0.68
DDR1-248ENST00000503180 ATP5JP18859 108 aa19.26■□□□□ 0.67
DDR1-248ENST00000503180 TNNI2P48788 182 aa19.26■□□□□ 0.67
DDR1-248ENST00000503180 MECOMQ03112 1051 aa19.26■□□□□ 0.67
DDR1-248ENST00000503180 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
DDR1-248ENST00000503180 SPDYE2Q495Y8 402 aa19.26■□□□□ 0.67
DDR1-248ENST00000503180 APOBEC3HQ6NTF7 200 aaKnown RBP19.26■□□□□ 0.67
DDR1-248ENST00000503180 DEFB129Q9H1M3 183 aa19.26■□□□□ 0.67
DDR1-248ENST00000503180 NF2P35240 595 aa19.25■□□□□ 0.67
DDR1-248ENST00000503180 FMR1Q06787 632 aaKnown RBP eCLIP19.25■□□□□ 0.67
DDR1-248ENST00000503180 CST9Q5W186 159 aa19.25■□□□□ 0.67
DDR1-248ENST00000503180 C2orf69Q8N8R5 385 aa19.25■□□□□ 0.67
DDR1-248ENST00000503180 ECHDC1Q9NTX5 307 aa19.25■□□□□ 0.67
DDR1-248ENST00000503180 PPP2R3BQ9Y5P8 575 aa19.25■□□□□ 0.67
DDR1-248ENST00000503180 POLR2AP24928 1970 aaKnown RBP19.24■□□□□ 0.67
DDR1-248ENST00000503180 MAP3K12Q12852 859 aa19.24■□□□□ 0.67
DDR1-248ENST00000503180 TMED8Q6PL24 325 aaPredicted RBP19.24■□□□□ 0.67
DDR1-248ENST00000503180 NSUN4Q96CB9 384 aaKnown RBP19.24■□□□□ 0.67
DDR1-248ENST00000503180 CDCA5Q96FF9 252 aa19.24■□□□□ 0.67
DDR1-248ENST00000503180 NOL10Q9BSC4 688 aaKnown RBP19.24■□□□□ 0.67
DDR1-248ENST00000503180 DAGLAQ9Y4D2 1042 aa19.24■□□□□ 0.67
DDR1-248ENST00000503180 IGHDP01880 384 aa19.23■□□□□ 0.67
DDR1-248ENST00000503180 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
DDR1-248ENST00000503180 FKBP1CQ5VVH2 108 aa19.23■□□□□ 0.67
DDR1-248ENST00000503180 NAA16Q6N069 864 aaPredicted RBP19.23■□□□□ 0.67
DDR1-248ENST00000503180 USP40Q9NVE5 1235 aa19.23■□□□□ 0.67
DDR1-248ENST00000503180 ABT1Q9ULW3 272 aaKnown RBP19.23■□□□□ 0.67
DDR1-248ENST00000503180 SCAF8Q9UPN6 1271 aaKnown RBP19.23■□□□□ 0.67
DDR1-248ENST00000503180 TCP10L2B9ZVM9 353 aa19.22■□□□□ 0.67
DDR1-248ENST00000503180 IDH1O75874 414 aaKnown RBP19.22■□□□□ 0.67
DDR1-248ENST00000503180 RASA3Q14644 834 aa19.22■□□□□ 0.67
DDR1-248ENST00000503180 DLK2Q6UY11 383 aa19.22■□□□□ 0.67
DDR1-248ENST00000503180 SMC5Q8IY18 1101 aa19.22■□□□□ 0.67
DDR1-248ENST00000503180 DNAJC2Q99543 621 aaKnown RBP19.22■□□□□ 0.67
DDR1-248ENST00000503180 BOLA2Q9H3K6 86 aa19.22■□□□□ 0.67
DDR1-248ENST00000503180 CEP350Q5VT06 3117 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 GPR75-ASB3A0A0A6YYF3 556 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 ERC2O15083 957 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 BAG3O95817 575 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 MAP4K4O95819 1239 aaPredicted RBP19.21■□□□□ 0.67
DDR1-248ENST00000503180 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 PRAMEF18Q5VWM3 479 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 CDC42EP5Q6NZY7 148 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 HAUS7Q99871 368 aa19.21■□□□□ 0.67
DDR1-248ENST00000503180 GBA2Q9HCG7 927 aaPredicted RBP19.21■□□□□ 0.67
DDR1-248ENST00000503180 PIH1D3Q9NQM4 214 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms