RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 SUGT1Q9Y2Z0 365 aa16.16■□□□□ 0.18
SGCA-203ENST00000502555 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
SGCA-203ENST00000502555 GNAT2P19087 354 aa16.15■□□□□ 0.18
SGCA-203ENST00000502555 PRDX5P30044 214 aa16.15■□□□□ 0.18
SGCA-203ENST00000502555 GSTO1P78417 241 aa16.15■□□□□ 0.18
SGCA-203ENST00000502555 MECOMQ03112 1051 aa16.15■□□□□ 0.18
SGCA-203ENST00000502555 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
SGCA-203ENST00000502555 DZIP1Q86YF9 867 aaKnown RBP16.15■□□□□ 0.18
SGCA-203ENST00000502555 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
SGCA-203ENST00000502555 PALD1Q9ULE6 856 aa16.15■□□□□ 0.18
SGCA-203ENST00000502555 RPAP1Q9BWH6 1393 aaPredicted RBP16.14■□□□□ 0.17
SGCA-203ENST00000502555 SLC27A2O14975 620 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 MBD4O95243 580 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 BECN1Q14457 450 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 DOK7Q18PE1 504 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 MFSD14BQ5SR56 506 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 STRBPQ96SI9 672 aaKnown RBP16.14■□□□□ 0.17
SGCA-203ENST00000502555 CTNNA3Q9UI47 895 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 JAG2Q9Y219 1238 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 SNX14Q9Y5W7 946 aa16.14■□□□□ 0.17
SGCA-203ENST00000502555 ZMYM6O95789 1325 aa16.13■□□□□ 0.17
SGCA-203ENST00000502555 PPIP5K2O43314 1243 aa16.13■□□□□ 0.17
SGCA-203ENST00000502555 FKBP1AP62942 108 aaKnown RBP16.13■□□□□ 0.17
SGCA-203ENST00000502555 GTF2IP78347 998 aa16.13■□□□□ 0.17
SGCA-203ENST00000502555 AOC3Q16853 763 aa16.13■□□□□ 0.17
SGCA-203ENST00000502555 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
SGCA-203ENST00000502555 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
SGCA-203ENST00000502555 SNX21Q969T3 373 aa16.13■□□□□ 0.17
SGCA-203ENST00000502555 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
SGCA-203ENST00000502555 MAGEB6P1A0A0J9YX57 407 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 FOXP2O15409 715 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 ECE2O60344 883 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 LDHCP07864 332 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 KRT32Q14532 448 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 TTLL5Q6EMB2 1281 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 CERS3Q8IU89 383 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 RASEFQ8IZ41 740 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 DBNDD1Q9H9R9 158 aa16.12■□□□□ 0.17
SGCA-203ENST00000502555 MYO5AQ9Y4I1 1855 aaKnown RBP16.11■□□□□ 0.17
SGCA-203ENST00000502555 ALX1Q15699 326 aa16.11■□□□□ 0.17
SGCA-203ENST00000502555 STRIP1Q5VSL9 837 aa16.11■□□□□ 0.17
SGCA-203ENST00000502555 ADGRA1Q86SQ6 560 aa16.11■□□□□ 0.17
SGCA-203ENST00000502555 LCORLQ8N3X6 602 aa16.11■□□□□ 0.17
SGCA-203ENST00000502555 MIGA1Q8NAN2 632 aa16.11■□□□□ 0.17
SGCA-203ENST00000502555 RIOK1Q9BRS2 568 aaKnown RBP16.11■□□□□ 0.17
SGCA-203ENST00000502555 ARMT1Q9H993 441 aa16.11■□□□□ 0.17
SGCA-203ENST00000502555 LTBP3Q9NS15 1303 aa16.1■□□□□ 0.17
SGCA-203ENST00000502555 ST18O60284 1047 aa16.1■□□□□ 0.17
SGCA-203ENST00000502555 PSMA5P28066 241 aa16.1■□□□□ 0.17
SGCA-203ENST00000502555 HSCBQ8IWL3 235 aa16.1■□□□□ 0.17
SGCA-203ENST00000502555 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
SGCA-203ENST00000502555 TAOK3Q9H2K8 898 aa16.1■□□□□ 0.17
SGCA-203ENST00000502555 MROH7-TTC4A0A0A0MT08 1334 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 USP17L3A6NCW0 530 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 USP17L4A6NCW7 530 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 PATL2C9JE40 543 aaKnown RBP16.09■□□□□ 0.17
SGCA-203ENST00000502555 FGAP02671 866 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 CYP21A2P08686 494 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 IMMTQ16891 758 aaKnown RBP16.09■□□□□ 0.17
SGCA-203ENST00000502555 USP17L1Q7RTZ2 530 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 NLGN2Q8NFZ4 835 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
SGCA-203ENST00000502555 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
SGCA-203ENST00000502555 DAXXQ9UER7 740 aaPredicted RBP16.09■□□□□ 0.17
SGCA-203ENST00000502555 BCS1LQ9Y276 419 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 SLC4A4Q9Y6R1 1079 aa16.09■□□□□ 0.17
SGCA-203ENST00000502555 GAKO14976 1311 aa16.08■□□□□ 0.17
SGCA-203ENST00000502555 BAG3O95817 575 aa16.08■□□□□ 0.16
SGCA-203ENST00000502555 APPP05067 770 aa16.08■□□□□ 0.16
SGCA-203ENST00000502555 IARSP41252 1262 aaKnown RBP16.08■□□□□ 0.16
SGCA-203ENST00000502555 PPP4CP60510 307 aa16.08■□□□□ 0.16
SGCA-203ENST00000502555 GRIK5Q16478 980 aa16.08■□□□□ 0.16
SGCA-203ENST00000502555 GIMAP6Q6P9H5 292 aa16.08■□□□□ 0.16
SGCA-203ENST00000502555 FBXW7Q969H0 707 aa16.08■□□□□ 0.16
SGCA-203ENST00000502555 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.16
SGCA-203ENST00000502555 TBC1D2Q9BYX2 928 aa16.08■□□□□ 0.16
SGCA-203ENST00000502555 CRNKL1Q9BZJ0 848 aaKnown RBP16.08■□□□□ 0.16
SGCA-203ENST00000502555 GSG1L2A8MUP6 293 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 MCM2P49736 904 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 NEK4P51957 841 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 DACT2Q5SW24 774 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 CERS5Q8N5B7 392 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 JAKMIP1Q96N16 626 aaKnown RBP16.07■□□□□ 0.16
SGCA-203ENST00000502555 NAPBQ9H115 298 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 ZSWIM6Q9HCJ5 1215 aa16.07■□□□□ 0.16
SGCA-203ENST00000502555 EPB41L4AQ9HCS5 686 aaPredicted RBP16.07■□□□□ 0.16
SGCA-203ENST00000502555 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
SGCA-203ENST00000502555 NFKBIEO00221 500 aa16.06■□□□□ 0.16
SGCA-203ENST00000502555 PLCG2P16885 1265 aa16.06■□□□□ 0.16
SGCA-203ENST00000502555 CASTP20810 708 aaKnown RBP16.06■□□□□ 0.16
SGCA-203ENST00000502555 DYNLL1P63167 89 aaKnown RBP16.06■□□□□ 0.16
SGCA-203ENST00000502555 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
SGCA-203ENST00000502555 IFNL3Q8IZI9 196 aa16.06■□□□□ 0.16
SGCA-203ENST00000502555 FHDC1Q9C0D6 1143 aaPredicted RBP16.06■□□□□ 0.16
SGCA-203ENST00000502555 AATFQ9NY61 560 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms