RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 SPATA5Q8NB90 893 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 TEKT1Q969V4 418 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 PRMT6Q96LA8 375 aaPredicted RBP8.96□□□□□ -0.98
USP46-203ENST00000502443 ZNF408Q9H9D4 720 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 CREBZFQ9NS37 354 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 TLR7Q9NYK1 1049 aaKnown RBP8.96□□□□□ -0.98
USP46-203ENST00000502443 HMG20BQ9P0W2 317 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 ABCF2Q9UG63 623 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 DBNLQ9UJU6 430 aaKnown RBP8.96□□□□□ -0.98
USP46-203ENST00000502443 SUGT1Q9Y2Z0 365 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 MAST3O60307 1309 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 PITPNM2Q9BZ72 1349 aa8.96□□□□□ -0.98
USP46-203ENST00000502443 CLRN2A0PK11 232 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 ZBTB22O15209 634 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 CELF2O95319 508 aaKnown RBP8.95□□□□□ -0.98
USP46-203ENST00000502443 IFIT2P09913 472 aaKnown RBP8.95□□□□□ -0.98
USP46-203ENST00000502443 PRDX5P30044 214 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 MCAMP43121 646 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 HDLBPQ00341 1268 aaKnown RBP8.95□□□□□ -0.98
USP46-203ENST00000502443 AAMPQ13685 434 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 CST9Q5W186 159 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 ZBED3Q96IU2 234 aaPredicted RBP8.95□□□□□ -0.98
USP46-203ENST00000502443 LRRCC1Q9C099 1032 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 ECM29Q5VYK3 1845 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
USP46-203ENST00000502443 SALL1Q9NSC2 1324 aa8.95□□□□□ -0.98
USP46-203ENST00000502443 IRX6P78412 446 aaPredicted RBP8.94□□□□□ -0.98
USP46-203ENST00000502443 DIXDC1Q155Q3 683 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 PRAMEF18Q5VWM3 479 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 SPTY2D1Q68D10 685 aaPredicted RBP8.94□□□□□ -0.98
USP46-203ENST00000502443 HHIPL2Q6UWX4 724 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 TBC1D9Q6ZT07 1266 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 ERICH6Q7L0X2 663 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 DZIP1Q86YF9 867 aaKnown RBP8.94□□□□□ -0.98
USP46-203ENST00000502443 APOBEC3FQ8IUX4 373 aaKnown RBP8.94□□□□□ -0.98
USP46-203ENST00000502443 EXOC6Q8TAG9 804 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 ZNF512BQ96KM6 892 aaPredicted RBP8.94□□□□□ -0.98
USP46-203ENST00000502443 ZDHHC15Q96MV8 337 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 MRIQ9BWK5 157 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 DCTPP1Q9H773 170 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 TDRD3Q9H7E2 651 aaKnown RBP8.94□□□□□ -0.98
USP46-203ENST00000502443 VEZTQ9HBM0 779 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 SNRKQ9NRH2 765 aa8.94□□□□□ -0.98
USP46-203ENST00000502443 ABT1Q9ULW3 272 aaKnown RBP8.94□□□□□ -0.98
USP46-203ENST00000502443 AKAP11Q9UKA4 1901 aa8.93□□□□□ -0.98
USP46-203ENST00000502443 SMARCA5O60264 1052 aaPredicted RBP8.93□□□□□ -0.98
USP46-203ENST00000502443 CDCA5Q96FF9 252 aa8.93□□□□□ -0.98
USP46-203ENST00000502443 DEFB129Q9H1M3 183 aa8.93□□□□□ -0.98
USP46-203ENST00000502443 RAI14Q9P0K7 980 aa8.93□□□□□ -0.98
USP46-203ENST00000502443 LRP2BPQ9P2M1 347 aa8.93□□□□□ -0.98
USP46-203ENST00000502443 ZNF70Q9UC06 446 aaPredicted RBP8.93□□□□□ -0.98
USP46-203ENST00000502443 AOX1Q06278 1338 aa8.93□□□□□ -0.98
USP46-203ENST00000502443 MYH2Q9UKX2 1941 aa8.93□□□□□ -0.98
USP46-203ENST00000502443 CYP2E1P05181 493 aaPredicted RBP8.92□□□□□ -0.98
USP46-203ENST00000502443 CENPBP07199 599 aaPredicted RBP8.92□□□□□ -0.98
USP46-203ENST00000502443 ZAP70P43403 619 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 MECOMQ03112 1051 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 TNFAIP1Q13829 316 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 SPDYE2Q495Y8 402 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
USP46-203ENST00000502443 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 DNAJC5GQ8N7S2 189 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 C2orf69Q8N8R5 385 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 TMOD2Q9NZR1 351 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 MKRN1Q9UHC7 482 aaKnown RBP8.92□□□□□ -0.98
USP46-203ENST00000502443 DAGLAQ9Y4D2 1042 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 NDUFB9Q9Y6M9 179 aa8.92□□□□□ -0.98
USP46-203ENST00000502443 MYO5AQ9Y4I1 1855 aaKnown RBP8.91□□□□□ -0.98
USP46-203ENST00000502443 CEP350Q5VT06 3117 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 TCP10L2B9ZVM9 353 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 NF2P35240 595 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 TNNI2P48788 182 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 CACNB3P54284 484 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 GSTO1P78417 241 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 HDAC1Q13547 482 aaPredicted RBP8.91□□□□□ -0.98
USP46-203ENST00000502443 RASA3Q14644 834 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 DEFB115Q30KQ5 88 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 PAXIP1Q6ZW49 1069 aaPredicted RBP8.91□□□□□ -0.98
USP46-203ENST00000502443 SAPCD2Q86UD0 394 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 KLRG1Q96E93 195 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
USP46-203ENST00000502443 GBA2Q9HCG7 927 aaPredicted RBP8.91□□□□□ -0.98
USP46-203ENST00000502443 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
USP46-203ENST00000502443 PPP2R3BQ9Y5P8 575 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 TLL2Q9Y6L7 1015 aa8.91□□□□□ -0.98
USP46-203ENST00000502443 CNTNAP1P78357 1384 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 RASSF10A6NK89 507 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 IDH1O75874 414 aaKnown RBP8.9□□□□□ -0.98
USP46-203ENST00000502443 LDHCP07864 332 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 HUNKP57058 714 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 GRM1Q13255 1194 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.98
USP46-203ENST00000502443 NAA16Q6N069 864 aaPredicted RBP8.9□□□□□ -0.98
USP46-203ENST00000502443 CDC42EP5Q6NZY7 148 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 ZNF384Q8TF68 577 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 NSUN4Q96CB9 384 aaKnown RBP8.9□□□□□ -0.98
USP46-203ENST00000502443 GCC1Q96CN9 775 aa8.9□□□□□ -0.98
USP46-203ENST00000502443 FAM163AQ96GL9 167 aaPredicted RBP8.9□□□□□ -0.98
USP46-203ENST00000502443 DNAJC2Q99543 621 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms