RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 ZNF697Q5TEC3 545 aa8.54□□□□□ -1.04
MED28-202ENST00000499786 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
MED28-202ENST00000499786 ZNF652Q9Y2D9 606 aa8.54□□□□□ -1.04
MED28-202ENST00000499786 ZBTB1Q9Y2K1 713 aa8.54□□□□□ -1.04
MED28-202ENST00000499786 BTAF1O14981 1849 aa8.54□□□□□ -1.04
MED28-202ENST00000499786 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
MED28-202ENST00000499786 TRAK2O60296 914 aa8.53□□□□□ -1.04
MED28-202ENST00000499786 HSP90B1P14625 803 aaKnown RBP8.53□□□□□ -1.04
MED28-202ENST00000499786 VARSP26640 1264 aaKnown RBP8.53□□□□□ -1.04
MED28-202ENST00000499786 CRKLP46109 303 aaKnown RBP8.53□□□□□ -1.04
MED28-202ENST00000499786 PDE1AP54750 535 aa8.53□□□□□ -1.04
MED28-202ENST00000499786 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
MED28-202ENST00000499786 BECN1Q14457 450 aa8.53□□□□□ -1.04
MED28-202ENST00000499786 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
MED28-202ENST00000499786 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
MED28-202ENST00000499786 OSBPL3Q9H4L5 887 aa8.53□□□□□ -1.04
MED28-202ENST00000499786 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
MED28-202ENST00000499786 AK9Q5TCS8 1911 aa8.52□□□□□ -1.04
MED28-202ENST00000499786 ERVV-1B6SEH8 477 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 HMGB2P26583 209 aaKnown RBP8.52□□□□□ -1.05
MED28-202ENST00000499786 WASHC4Q2M389 1173 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 TAF7LQ5H9L4 462 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 TRMT44Q8IYL2 757 aaKnown RBP8.52□□□□□ -1.05
MED28-202ENST00000499786 MPNDQ8N594 471 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 IL1RAPL2Q9NP60 686 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 TTC41PQ6P2S7 1318 aa8.52□□□□□ -1.05
MED28-202ENST00000499786 BCORQ6W2J9 1755 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 H7C1W4 665 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 REC8O95072 547 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 PCCAP05165 728 aaPredicted RBP8.51□□□□□ -1.05
MED28-202ENST00000499786 GSPT1P15170 499 aaKnown RBP8.51□□□□□ -1.05
MED28-202ENST00000499786 VAC14Q08AM6 782 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 TRIM28Q13263 835 aaKnown RBP8.51□□□□□ -1.05
MED28-202ENST00000499786 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
MED28-202ENST00000499786 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 AACSQ86V21 672 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 C16orf71Q8IYS4 520 aaPredicted RBP8.51□□□□□ -1.05
MED28-202ENST00000499786 CNTROBQ8N137 903 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 OTUD7AQ8TE49 926 aaPredicted RBP8.51□□□□□ -1.05
MED28-202ENST00000499786 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 TBC1D32Q96NH3 1257 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 ISCA1Q9BUE6 129 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 C22orf23Q9BZE7 217 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 SIL1Q9H173 461 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 PA2G4Q9UQ80 394 aaKnown RBP8.51□□□□□ -1.05
MED28-202ENST00000499786 NUP98P52948 1817 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 CDHR2Q9BYE9 1310 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 CNTNAP4Q9C0A0 1308 aa8.51□□□□□ -1.05
MED28-202ENST00000499786 SCN7AQ01118 1682 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 GLRX3O76003 335 aaKnown RBP8.5□□□□□ -1.05
MED28-202ENST00000499786 SDSP20132 328 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 PRR20EP86478 221 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 PRR20CP86479 221 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 PRR20DP86480 221 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 PRR20BP86481 221 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 PRR20AP86496 221 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 CCDC57Q2TAC2 916 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 PARP10Q53GL7 1025 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 ZNF772Q68DY9 489 aaPredicted RBP8.5□□□□□ -1.05
MED28-202ENST00000499786 LMBR1LQ6UX01 489 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 SEPT12Q8IYM1 358 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 ZBTB38Q8NAP3 1195 aaPredicted RBP8.5□□□□□ -1.05
MED28-202ENST00000499786 RILPL2Q969X0 211 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 SLC4A9Q96Q91 983 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 QTRT2Q9H974 415 aaKnown RBP8.5□□□□□ -1.05
MED28-202ENST00000499786 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 STAP2Q9UGK3 403 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 MYH3P11055 1940 aa8.5□□□□□ -1.05
MED28-202ENST00000499786 LAMB2P55268 1798 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 POM121CA8CG34 1229 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 KCNQ2O43526 872 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 MCCP23508 829 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 GPTP24298 496 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 EIF5P55010 431 aaKnown RBP8.49□□□□□ -1.05
MED28-202ENST00000499786 CASP7P55210 303 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 JARID2Q92833 1246 aaPredicted RBP8.49□□□□□ -1.05
MED28-202ENST00000499786 ALG2Q9H553 416 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 ECHDC1Q9NTX5 307 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 TRMT112Q9UI30 125 aaKnown RBP8.49□□□□□ -1.05
MED28-202ENST00000499786 CCNL1Q9UK58 526 aaPredicted RBP8.49□□□□□ -1.05
MED28-202ENST00000499786 SBF2Q86WG5 1849 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 TUBGCP6Q96RT7 1819 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 SALL3Q9BXA9 1300 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 USP42Q9H9J4 1324 aaKnown RBP8.49□□□□□ -1.05
MED28-202ENST00000499786 LY75O60449 1722 aa8.49□□□□□ -1.05
MED28-202ENST00000499786 MAGEB6P1A0A0J9YX57 407 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 IL15P40933 162 aaPredicted RBP8.48□□□□□ -1.05
MED28-202ENST00000499786 IFIT5Q13325 482 aaKnown RBP8.48□□□□□ -1.05
MED28-202ENST00000499786 ITPK1Q13572 414 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 AGERQ15109 404 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 EPHA10Q5JZY3 1008 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 TSHZ3Q63HK5 1081 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 NLRP10Q86W26 655 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 HSCBQ8IWL3 235 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 EHBP1Q8NDI1 1231 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 FAM174AQ8TBP5 190 aa8.48□□□□□ -1.05
MED28-202ENST00000499786 ADAMTS19Q8TE59 1207 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms