RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 DPF3Q92784 378 aa11.65□□□□□ -0.54
CCDC171-209ENST00000498725 ZNF594Q96JF6 807 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-209ENST00000498725 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
CCDC171-209ENST00000498725 AK9Q5TCS8 1911 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 UNCXA6NJT0 531 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 CSF1RP07333 972 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 IL1R1P14778 569 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 GTF2A2P52657 109 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 CASP7P55210 303 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
CCDC171-209ENST00000498725 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-209ENST00000498725 KIF22Q14807 665 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 PLA2G12BQ9BX93 195 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 MYH16Q9H6N6 1097 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 TTF2Q9UNY4 1162 aaKnown RBP11.64□□□□□ -0.55
CCDC171-209ENST00000498725 CSADQ9Y600 493 aa11.64□□□□□ -0.55
CCDC171-209ENST00000498725 CACNB3P54284 484 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 TNFAIP1Q13829 316 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 MTFR1Q15390 333 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
CCDC171-209ENST00000498725 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 MFSD14BQ5SR56 506 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 CNNM1Q9NRU3 951 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 BRCA2P51587 3418 aa11.63□□□□□ -0.55
CCDC171-209ENST00000498725 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-209ENST00000498725 GYG1P46976 350 aa11.62□□□□□ -0.55
CCDC171-209ENST00000498725 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
CCDC171-209ENST00000498725 FOXO4P98177 505 aa11.62□□□□□ -0.55
CCDC171-209ENST00000498725 FLIIQ13045 1269 aa11.62□□□□□ -0.55
CCDC171-209ENST00000498725 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
CCDC171-209ENST00000498725 DZIP1LQ8IYY4 767 aaKnown RBP11.62□□□□□ -0.55
CCDC171-209ENST00000498725 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
CCDC171-209ENST00000498725 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
CCDC171-209ENST00000498725 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
CCDC171-209ENST00000498725 IQSEC3Q9UPP2 1182 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-209ENST00000498725 MGAMO43451 1857 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 BTBD19C9JJ37 291 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 CRKP46108 304 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 TNNI2P48788 182 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 LACTBP83111 547 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-209ENST00000498725 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-209ENST00000498725 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 LDHAL6AQ6ZMR3 332 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 ZKSCAN4Q969J2 545 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-209ENST00000498725 BIN2Q9UBW5 565 aaPredicted RBP11.61□□□□□ -0.55
CCDC171-209ENST00000498725 CPA4Q9UI42 421 aa11.61□□□□□ -0.55
CCDC171-209ENST00000498725 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 F6X3S4 739 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 TLR2O60603 784 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 CETPP11597 493 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 GRIK5Q16478 980 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 CCDC57Q2TAC2 916 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 EPHA10Q5JZY3 1008 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 LINS1Q8NG48 757 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCDC171-209ENST00000498725 SHISA4Q96DD7 197 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 WRNIP1Q96S55 665 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 SNCAIPQ9Y6H5 919 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 FAM205AQ6ZU69 1335 aa11.6□□□□□ -0.55
CCDC171-209ENST00000498725 DLL1O00548 723 aa11.59□□□□□ -0.55
CCDC171-209ENST00000498725 HIBADHP31937 336 aaKnown RBP11.59□□□□□ -0.55
CCDC171-209ENST00000498725 PSMC4P43686 418 aa11.59□□□□□ -0.55
CCDC171-209ENST00000498725 TDRD7Q8NHU6 1098 aaKnown RBP11.59□□□□□ -0.55
CCDC171-209ENST00000498725 TRIOBPQ9H2D6 2365 aa11.59□□□□□ -0.55
CCDC171-209ENST00000498725 SPDYE5A6NIY4 337 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 IRF6O14896 467 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-209ENST00000498725 FMNL1O95466 1100 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-209ENST00000498725 CCL5P13501 91 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 CTGFP29279 349 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 SNAPC2Q13487 334 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 ERO1BQ86YB8 467 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-209ENST00000498725 RAET1EQ8TD07 263 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 TRIM47Q96LD4 638 aa11.58□□□□□ -0.56
CCDC171-209ENST00000498725 PUS3Q9BZE2 481 aaKnown RBP11.58□□□□□ -0.56
CCDC171-209ENST00000498725 CEP290O15078 2479 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 OSBPP22059 807 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 GRK4P32298 578 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-209ENST00000498725 RNF208Q9H0X6 261 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 SRRDQ9UH36 339 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 MYPNQ86TC9 1320 aa11.57□□□□□ -0.56
CCDC171-209ENST00000498725 PPIL2Q13356 520 aa11.56□□□□□ -0.56
CCDC171-209ENST00000498725 TEKT1Q969V4 418 aa11.56□□□□□ -0.56
CCDC171-209ENST00000498725 HTATIP2Q9BUP3 242 aa11.56□□□□□ -0.56
CCDC171-209ENST00000498725 PRKRIP1Q9H875 184 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-209ENST00000498725 TMOD2Q9NZR1 351 aa11.56□□□□□ -0.56
CCDC171-209ENST00000498725 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-209ENST00000498725 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
CCDC171-209ENST00000498725 ALPK3Q96L96 1907 aa11.55□□□□□ -0.56
CCDC171-209ENST00000498725 PDHXO00330 501 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms