RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
FAM3D-205ENST00000498347 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
FAM3D-205ENST00000498347 FAM161BQ96MY7 647 aa11.68□□□□□ -0.54
FAM3D-205ENST00000498347 RAPGEFL1Q9UHV5 662 aa11.68□□□□□ -0.54
FAM3D-205ENST00000498347 FAM205AQ6ZU69 1335 aa11.67□□□□□ -0.54
FAM3D-205ENST00000498347 IRF6O14896 467 aa11.67□□□□□ -0.54
FAM3D-205ENST00000498347 PCCAP05165 728 aaPredicted RBP11.67□□□□□ -0.54
FAM3D-205ENST00000498347 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
FAM3D-205ENST00000498347 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
FAM3D-205ENST00000498347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
FAM3D-205ENST00000498347 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
FAM3D-205ENST00000498347 PAK6Q9NQU5 681 aaPredicted RBP11.67□□□□□ -0.54
FAM3D-205ENST00000498347 CHPF2Q9P2E5 772 aa11.67□□□□□ -0.54
FAM3D-205ENST00000498347 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
FAM3D-205ENST00000498347 FKBP1AP62942 108 aaKnown RBP11.66□□□□□ -0.54
FAM3D-205ENST00000498347 ANKRD23Q86SG2 305 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 CERS5Q8N5B7 392 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 MAFAQ8NHW3 353 aaPredicted RBP11.66□□□□□ -0.54
FAM3D-205ENST00000498347 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 CDX2Q99626 313 aaPredicted RBP11.66□□□□□ -0.54
FAM3D-205ENST00000498347 ANKRD2Q9GZV1 360 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 CD209Q9NNX6 404 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 DBF4Q9UBU7 674 aaPredicted RBP11.66□□□□□ -0.54
FAM3D-205ENST00000498347 ZNF70Q9UC06 446 aaPredicted RBP11.66□□□□□ -0.54
FAM3D-205ENST00000498347 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
FAM3D-205ENST00000498347 PDHXO00330 501 aa11.65□□□□□ -0.54
FAM3D-205ENST00000498347 INHAP05111 366 aa11.65□□□□□ -0.54
FAM3D-205ENST00000498347 PPIL2Q13356 520 aa11.65□□□□□ -0.54
FAM3D-205ENST00000498347 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
FAM3D-205ENST00000498347 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.54
FAM3D-205ENST00000498347 DIS3LQ8TF46 1054 aaKnown RBP11.65□□□□□ -0.54
FAM3D-205ENST00000498347 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
FAM3D-205ENST00000498347 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.54
FAM3D-205ENST00000498347 ADGRA2Q96PE1 1338 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 ELNP15502 786 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 TNNI2P48788 182 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 FLT3LGP49771 235 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 IRF5Q13568 498 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 SPDYE2Q495Y8 402 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 JARID2Q92833 1246 aaPredicted RBP11.64□□□□□ -0.55
FAM3D-205ENST00000498347 SEMA6BQ9H3T3 888 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 VCANP13611 3396 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 ZSWIM8A7E2V4 1837 aa11.64□□□□□ -0.55
FAM3D-205ENST00000498347 ANP32CO43423 234 aa11.63□□□□□ -0.55
FAM3D-205ENST00000498347 PPP2R1AP30153 589 aa11.63□□□□□ -0.55
FAM3D-205ENST00000498347 PPATQ06203 517 aa11.63□□□□□ -0.55
FAM3D-205ENST00000498347 TTLL11Q8NHH1 800 aa11.63□□□□□ -0.55
FAM3D-205ENST00000498347 ZKSCAN4Q969J2 545 aaPredicted RBP11.63□□□□□ -0.55
FAM3D-205ENST00000498347 SNCAIPQ9Y6H5 919 aa11.63□□□□□ -0.55
FAM3D-205ENST00000498347 AOX1Q06278 1338 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 BCRP11274 1271 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
FAM3D-205ENST00000498347 MAP3K12Q12852 859 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 HDGFL1Q5TGJ6 251 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 TMEM39BQ9GZU3 492 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 C11orf49Q9H6J7 331 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 TDRD3Q9H7E2 651 aaKnown RBP11.62□□□□□ -0.55
FAM3D-205ENST00000498347 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
FAM3D-205ENST00000498347 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
FAM3D-205ENST00000498347 SPTBN5Q9NRC6 3674 aaKnown RBP11.61□□□□□ -0.55
FAM3D-205ENST00000498347 TMEM265A0A087WTH1 108 aa11.61□□□□□ -0.55
FAM3D-205ENST00000498347 TCP10L2B9ZVM9 353 aa11.61□□□□□ -0.55
FAM3D-205ENST00000498347 KLRK1P26718 216 aa11.61□□□□□ -0.55
FAM3D-205ENST00000498347 KCNJ4P48050 445 aa11.61□□□□□ -0.55
FAM3D-205ENST00000498347 CTSWP56202 376 aa11.61□□□□□ -0.55
FAM3D-205ENST00000498347 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
FAM3D-205ENST00000498347 HOOK2Q96ED9 719 aa11.61□□□□□ -0.55
FAM3D-205ENST00000498347 MYD88Q99836 296 aa11.61□□□□□ -0.55
FAM3D-205ENST00000498347 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.61□□□□□ -0.55
FAM3D-205ENST00000498347 NEFLP07196 543 aa11.6□□□□□ -0.55
FAM3D-205ENST00000498347 IL1R1P14778 569 aa11.6□□□□□ -0.55
FAM3D-205ENST00000498347 RIPK4P57078 832 aa11.6□□□□□ -0.55
FAM3D-205ENST00000498347 MDM2Q00987 491 aaPredicted RBP11.6□□□□□ -0.55
FAM3D-205ENST00000498347 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
FAM3D-205ENST00000498347 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
FAM3D-205ENST00000498347 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
FAM3D-205ENST00000498347 WRNIP1Q96S55 665 aa11.6□□□□□ -0.55
FAM3D-205ENST00000498347 PARK7Q99497 189 aaKnown RBP11.6□□□□□ -0.55
FAM3D-205ENST00000498347 GREM2Q9H772 168 aa11.6□□□□□ -0.55
FAM3D-205ENST00000498347 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
FAM3D-205ENST00000498347 CHL1O00533 1208 aa11.59□□□□□ -0.55
FAM3D-205ENST00000498347 HOXB7P09629 217 aa11.59□□□□□ -0.55
FAM3D-205ENST00000498347 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
FAM3D-205ENST00000498347 DZIP1LQ8IYY4 767 aaKnown RBP11.59□□□□□ -0.55
FAM3D-205ENST00000498347 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
FAM3D-205ENST00000498347 LBHD1Q9BQE6 289 aaPredicted RBP11.59□□□□□ -0.55
FAM3D-205ENST00000498347 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
FAM3D-205ENST00000498347 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
FAM3D-205ENST00000498347 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
FAM3D-205ENST00000498347 ALPK3Q96L96 1907 aa11.58□□□□□ -0.55
FAM3D-205ENST00000498347 TNPO2O14787 897 aaKnown RBP11.58□□□□□ -0.56
FAM3D-205ENST00000498347 ZNF804AQ7Z570 1209 aa11.58□□□□□ -0.56
FAM3D-205ENST00000498347 MYLIPQ8WY64 445 aa11.58□□□□□ -0.56
FAM3D-205ENST00000498347 COA7Q96BR5 231 aa11.58□□□□□ -0.56
FAM3D-205ENST00000498347 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
FAM3D-205ENST00000498347 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms