RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 CRKP46108 304 aa23.31■■□□□ 1.32
PRKCB-209ENST00000498058 CHAF1AQ13111 956 aaPredicted RBP23.31■■□□□ 1.32
PRKCB-209ENST00000498058 SUPT20HL1Q3ZLR7 823 aa23.31■■□□□ 1.32
PRKCB-209ENST00000498058 BCAMP50895 628 aa23.3■■□□□ 1.32
PRKCB-209ENST00000498058 IFNL1Q8IU54 200 aa23.3■■□□□ 1.32
PRKCB-209ENST00000498058 TRMT2AQ8IZ69 625 aaKnown RBP23.3■■□□□ 1.32
PRKCB-209ENST00000498058 MANSC4A6NHS7 340 aaPredicted RBP23.29■■□□□ 1.32
PRKCB-209ENST00000498058 TCP10L2B9ZVM9 353 aa23.29■■□□□ 1.32
PRKCB-209ENST00000498058 FGFR2P21802 821 aa23.29■■□□□ 1.32
PRKCB-209ENST00000498058 ZBTB48P10074 688 aaPredicted RBP23.28■■□□□ 1.32
PRKCB-209ENST00000498058 TMEM39BQ9GZU3 492 aa23.28■■□□□ 1.32
PRKCB-209ENST00000498058 FKTNO75072 461 aa23.27■■□□□ 1.32
PRKCB-209ENST00000498058 IREB2P48200 963 aaKnown RBP23.27■■□□□ 1.32
PRKCB-209ENST00000498058 ALDH1L2Q3SY69 923 aa23.27■■□□□ 1.32
PRKCB-209ENST00000498058 VPS37DQ86XT2 251 aa23.27■■□□□ 1.32
PRKCB-209ENST00000498058 PTPN18Q99952 460 aa23.27■■□□□ 1.32
PRKCB-209ENST00000498058 UNCXA6NJT0 531 aa23.26■■□□□ 1.31
PRKCB-209ENST00000498058 CACNB3P54284 484 aa23.26■■□□□ 1.31
PRKCB-209ENST00000498058 PKN2Q16513 984 aaKnown RBP23.26■■□□□ 1.31
PRKCB-209ENST00000498058 ANKRD13AQ8IZ07 590 aa23.26■■□□□ 1.31
PRKCB-209ENST00000498058 CNKSR2Q8WXI2 1034 aa23.26■■□□□ 1.31
PRKCB-209ENST00000498058 ELP3Q9H9T3 547 aa23.26■■□□□ 1.31
PRKCB-209ENST00000498058 INHBEP58166 350 aa23.25■■□□□ 1.31
PRKCB-209ENST00000498058 TNFAIP1Q13829 316 aa23.25■■□□□ 1.31
PRKCB-209ENST00000498058 CAVIN4Q5BKX8 364 aa23.25■■□□□ 1.31
PRKCB-209ENST00000498058 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.25■■□□□ 1.31
PRKCB-209ENST00000498058 ATG9AQ7Z3C6 839 aa23.25■■□□□ 1.31
PRKCB-209ENST00000498058 SMC4Q9NTJ3 1288 aa23.25■■□□□ 1.31
PRKCB-209ENST00000498058 EYA2O00167 538 aa23.24■■□□□ 1.31
PRKCB-209ENST00000498058 ALDH1A1P00352 501 aa23.24■■□□□ 1.31
PRKCB-209ENST00000498058 TESPA1A2RU30 521 aaPredicted RBP23.23■■□□□ 1.31
PRKCB-209ENST00000498058 HDLBPQ00341 1268 aaKnown RBP23.23■■□□□ 1.31
PRKCB-209ENST00000498058 CAP1Q01518 475 aa23.23■■□□□ 1.31
PRKCB-209ENST00000498058 PUM3Q15397 648 aaKnown RBP23.23■■□□□ 1.31
PRKCB-209ENST00000498058 FBXO46Q6PJ61 603 aaPredicted RBP23.23■■□□□ 1.31
PRKCB-209ENST00000498058 TBC1D22AQ8WUA7 517 aa23.23■■□□□ 1.31
PRKCB-209ENST00000498058 OPTNQ96CV9 577 aa23.23■■□□□ 1.31
PRKCB-209ENST00000498058 MS4A4AQ96JQ5 239 aa23.23■■□□□ 1.31
PRKCB-209ENST00000498058 MYH13Q9UKX3 1938 aa23.23■■□□□ 1.31
PRKCB-209ENST00000498058 PDE4DIPQ5VU43 2346 aa23.22■■□□□ 1.31
PRKCB-209ENST00000498058 FRAT2O75474 233 aaPredicted RBP23.22■■□□□ 1.31
PRKCB-209ENST00000498058 APOBEC3HQ6NTF7 200 aaKnown RBP23.22■■□□□ 1.31
PRKCB-209ENST00000498058 NOB1Q9ULX3 412 aaKnown RBP23.22■■□□□ 1.31
PRKCB-209ENST00000498058 HTTP42858 3142 aa23.22■■□□□ 1.31
PRKCB-209ENST00000498058 IFIT1P09914 478 aaKnown RBP23.21■■□□□ 1.31
PRKCB-209ENST00000498058 CRHR2Q13324 411 aa23.21■■□□□ 1.31
PRKCB-209ENST00000498058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.21■■□□□ 1.31
PRKCB-209ENST00000498058 TEKT1Q969V4 418 aa23.21■■□□□ 1.31
PRKCB-209ENST00000498058 ZDHHC15Q96MV8 337 aa23.21■■□□□ 1.31
PRKCB-209ENST00000498058 KIF16BQ96L93 1317 aa23.21■■□□□ 1.31
PRKCB-209ENST00000498058 VGLL4Q14135 290 aa23.2■■□□□ 1.3
PRKCB-209ENST00000498058 MAP3K9P80192 1104 aa23.19■■□□□ 1.3
PRKCB-209ENST00000498058 OTOP1Q7RTM1 612 aa23.19■■□□□ 1.3
PRKCB-209ENST00000498058 BRI3BPQ8WY22 251 aa23.19■■□□□ 1.3
PRKCB-209ENST00000498058 MRIQ9BWK5 157 aa23.19■■□□□ 1.3
PRKCB-209ENST00000498058 SIL1Q9H173 461 aa23.19■■□□□ 1.3
PRKCB-209ENST00000498058 TNNI2P48788 182 aa23.18■■□□□ 1.3
PRKCB-209ENST00000498058 LPIN2Q92539 896 aa23.18■■□□□ 1.3
PRKCB-209ENST00000498058 TRIM17Q9Y577 477 aa23.18■■□□□ 1.3
PRKCB-209ENST00000498058 UBTFL1P0CB47 393 aaPredicted RBP23.17■■□□□ 1.3
PRKCB-209ENST00000498058 SLC5A1P13866 664 aa23.17■■□□□ 1.3
PRKCB-209ENST00000498058 CD99L2Q8TCZ2 262 aa23.17■■□□□ 1.3
PRKCB-209ENST00000498058 PA2G4Q9UQ80 394 aaKnown RBP23.17■■□□□ 1.3
PRKCB-209ENST00000498058 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
PRKCB-209ENST00000498058 HHIPL2Q6UWX4 724 aa23.16■■□□□ 1.3
PRKCB-209ENST00000498058 SUGT1Q9Y2Z0 365 aa23.16■■□□□ 1.3
PRKCB-209ENST00000498058 SNCAIPQ9Y6H5 919 aa23.16■■□□□ 1.3
PRKCB-209ENST00000498058 SLC34A2O95436 690 aa23.15■■□□□ 1.3
PRKCB-209ENST00000498058 FAM83AQ86UY5 434 aa23.15■■□□□ 1.3
PRKCB-209ENST00000498058 MEIS3Q99687 375 aa23.15■■□□□ 1.3
PRKCB-209ENST00000498058 CIAO1O76071 339 aa23.14■■□□□ 1.29
PRKCB-209ENST00000498058 PRDX5P30044 214 aa23.14■■□□□ 1.29
PRKCB-209ENST00000498058 DIXDC1Q155Q3 683 aa23.14■■□□□ 1.29
PRKCB-209ENST00000498058 OTUD7BQ6GQQ9 843 aa23.14■■□□□ 1.29
PRKCB-209ENST00000498058 FAM43AQ8N2R8 423 aa23.14■■□□□ 1.29
PRKCB-209ENST00000498058 ZKSCAN4Q969J2 545 aaPredicted RBP23.14■■□□□ 1.29
PRKCB-209ENST00000498058 OTUD5Q96G74 571 aa23.14■■□□□ 1.29
PRKCB-209ENST00000498058 DAGLAQ9Y4D2 1042 aa23.14■■□□□ 1.29
PRKCB-209ENST00000498058 MAST3O60307 1309 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 CCL15-CCL14A0A0B4J2E2 113 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 CT47B1P0C2W7 299 aaPredicted RBP23.13■■□□□ 1.29
PRKCB-209ENST00000498058 PHKA1P46020 1223 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 RARSP54136 660 aaKnown RBP23.13■■□□□ 1.29
PRKCB-209ENST00000498058 CCL15Q16663 113 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 ATP2B3Q16720 1220 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 FKBP1CQ5VVH2 108 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 WDR66Q8TBY9 1149 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 CSADQ9Y600 493 aa23.13■■□□□ 1.29
PRKCB-209ENST00000498058 SPDYE5A6NIY4 337 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 ADORA1P30542 326 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 CDC42EP5Q6NZY7 148 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 ERO1AQ96HE7 468 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 WRNIP1Q96S55 665 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 API5Q9BZZ5 524 aaKnown RBP23.12■■□□□ 1.29
PRKCB-209ENST00000498058 TMOD2Q9NZR1 351 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 CEP126Q9P2H0 1117 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 FBXO3Q9UK99 471 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 PTPN22Q9Y2R2 807 aa23.12■■□□□ 1.29
PRKCB-209ENST00000498058 ZSWIM8A7E2V4 1837 aa23.11■■□□□ 1.29
PRKCB-209ENST00000498058 GTF2A2P52657 109 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms