RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 CABLES1Q8TDN4 633 aa8.2□□□□□ -1.1
MACF1-226ENST00000497964 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
MACF1-226ENST00000497964 CABP5Q9NP86 173 aa8.2□□□□□ -1.1
MACF1-226ENST00000497964 DBNLQ9UJU6 430 aaKnown RBP8.2□□□□□ -1.1
MACF1-226ENST00000497964 MADDQ8WXG6 1647 aa8.2□□□□□ -1.1
MACF1-226ENST00000497964 STARD3NLO95772 234 aa8.2□□□□□ -1.1
MACF1-226ENST00000497964 HOXB7P09629 217 aa8.2□□□□□ -1.1
MACF1-226ENST00000497964 METTL22Q9BUU2 404 aaPredicted RBP8.2□□□□□ -1.1
MACF1-226ENST00000497964 HELLSQ9NRZ9 838 aa8.2□□□□□ -1.1
MACF1-226ENST00000497964 BCCIPQ9P287 314 aaKnown RBP eCLIP8.2□□□□□ -1.1
MACF1-226ENST00000497964 PLEKHG3A1L390 1219 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 TRIM75PA6NK02 468 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 IDEP14735 1019 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 PPARDQ03181 441 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 KRT40Q6A162 431 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 BICDL1Q6ZP65 573 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 CATIPQ7Z7H3 387 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 MICALL1Q8N3F8 863 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 ZNF496Q96IT1 587 aaPredicted RBP8.19□□□□□ -1.1
MACF1-226ENST00000497964 PPP1R13BQ96KQ4 1090 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 CLIC6Q96NY7 704 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 CCDC194A0A1B0GVG4 234 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 AKR1B10O60218 316 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 IVLP07476 585 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 IGHMBP2P38935 993 aaKnown RBP8.19□□□□□ -1.1
MACF1-226ENST00000497964 USP8P40818 1118 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 GTF2A1P52655 376 aaPredicted RBP8.19□□□□□ -1.1
MACF1-226ENST00000497964 HLTFQ14527 1009 aaKnown RBP eCLIP8.19□□□□□ -1.1
MACF1-226ENST00000497964 ZSCAN26Q16670 478 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 SLFNL1Q499Z3 407 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 TAX1BP1Q86VP1 789 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 FAM89AQ96GI7 184 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 LUC7LQ9NQ29 371 aaKnown RBP8.19□□□□□ -1.1
MACF1-226ENST00000497964 GJB4Q9NTQ9 266 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 BABAM1Q9NWV8 329 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 METP08581 1390 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 AATKQ6ZMQ8 1374 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 MAP3K4Q9Y6R4 1608 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 NEURL1BA8MQ27 555 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 GPAA1O43292 621 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 USO1O60763 962 aaKnown RBP8.19□□□□□ -1.1
MACF1-226ENST00000497964 PFKFB2O60825 505 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 SASH1O94885 1247 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 ZSCAN20P17040 1043 aaPredicted RBP8.19□□□□□ -1.1
MACF1-226ENST00000497964 SOGA3Q5TF21 947 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 DIS3L2Q8IYB7 885 aaKnown RBP8.19□□□□□ -1.1
MACF1-226ENST00000497964 MIGA1Q8NAN2 632 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 PLIN2Q99541 437 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 TMOD3Q9NYL9 352 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 KCNJ14Q9UNX9 436 aa8.19□□□□□ -1.1
MACF1-226ENST00000497964 MYO1BO43795 1136 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 HSPD1P10809 573 aaKnown RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 ATP1A3P13637 1013 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 MCM3P25205 808 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 USP5P45974 858 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 TTF1Q15361 905 aaPredicted RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 HDXQ7Z353 690 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 ZNF710Q8N1W2 664 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 NSUN7Q8NE18 718 aaKnown RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 CTAGE1Q96RT6 745 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 RNF41Q9H4P4 317 aaPredicted RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 ANGEL1Q9UNK9 670 aaKnown RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 hCG_1642624A0A1W2PR95 340 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 EYA2O00167 538 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 PDIA3P30101 505 aaKnown RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 CCDC96Q2M329 555 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 GPHNQ9NQX3 736 aaPredicted RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 DDX41Q9UJV9 622 aaKnown RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 RCOR1Q9UKL0 485 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 SLC4A4Q9Y6R1 1079 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 CLCN6P51797 869 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 PIP4K2BP78356 416 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 UBXN1Q04323 297 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 TERF2Q15554 542 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 KMT5BQ4FZB7 885 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 CT47A1Q5JQC4 288 aaPredicted RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
MACF1-226ENST00000497964 HINFPQ9BQA5 517 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 ARHGEF10O15013 1369 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 PNPLA6Q8IY17 1366 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 SLC5A1P13866 664 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 RESTQ13127 1097 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 TAF4BQ92750 862 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 PPP2R2CQ9Y2T4 447 aa8.18□□□□□ -1.1
MACF1-226ENST00000497964 CROCC2H7BZ55 1655 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 LRRC7Q96NW7 1537 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 ZBTB22O15209 634 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 ZEB2O60315 1214 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 ATP2C2O75185 946 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 A1BGP04217 495 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 IKQ13123 557 aaPredicted RBP8.17□□□□□ -1.1
MACF1-226ENST00000497964 POLA2Q14181 598 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 ZNF174Q15697 407 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 SPECC1LQ69YQ0 1117 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 FBXO18Q8NFZ0 1043 aa8.17□□□□□ -1.1
MACF1-226ENST00000497964 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
MACF1-226ENST00000497964 PCDHA5Q9Y5H7 936 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms