RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 NID1P14543 1247 aa11.27□□□□□ -0.61
GARNL3-221ENST00000497703 NME2P22392 152 aa11.27□□□□□ -0.61
GARNL3-221ENST00000497703 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.61
GARNL3-221ENST00000497703 SULF2Q8IWU5 870 aa11.27□□□□□ -0.61
GARNL3-221ENST00000497703 CBX8Q9HC52 389 aa11.27□□□□□ -0.61
GARNL3-221ENST00000497703 KBTBD4Q9NVX7 518 aa11.27□□□□□ -0.61
GARNL3-221ENST00000497703 GNB5O14775 395 aa11.26□□□□□ -0.61
GARNL3-221ENST00000497703 LIG3P49916 1009 aa11.26□□□□□ -0.61
GARNL3-221ENST00000497703 PCNX4Q63HM2 1172 aa11.26□□□□□ -0.61
GARNL3-221ENST00000497703 CORO1BQ9BR76 489 aa11.26□□□□□ -0.61
GARNL3-221ENST00000497703 RPS26P62854 115 aaKnown RBP11.25□□□□□ -0.61
GARNL3-221ENST00000497703 INSM1Q01101 510 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-221ENST00000497703 ZNF394Q53GI3 561 aa11.25□□□□□ -0.61
GARNL3-221ENST00000497703 HP1BP3Q5SSJ5 553 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-221ENST00000497703 LCE2AQ5TA79 106 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-221ENST00000497703 ZSCAN1Q8NBB4 408 aa11.25□□□□□ -0.61
GARNL3-221ENST00000497703 TMEM74Q96NL1 305 aa11.25□□□□□ -0.61
GARNL3-221ENST00000497703 CARD10Q9BWT7 1032 aa11.25□□□□□ -0.61
GARNL3-221ENST00000497703 NOP53Q9NZM5 478 aaKnown RBP11.25□□□□□ -0.61
GARNL3-221ENST00000497703 CYP8B1Q9UNU6 501 aa11.25□□□□□ -0.61
GARNL3-221ENST00000497703 SUZ12Q15022 739 aaKnown RBP11.24□□□□□ -0.61
GARNL3-221ENST00000497703 TRIM56Q9BRZ2 755 aaKnown RBP11.24□□□□□ -0.61
GARNL3-221ENST00000497703 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
GARNL3-221ENST00000497703 PCDHGB7Q9Y5F8 929 aa11.24□□□□□ -0.61
GARNL3-221ENST00000497703 MINDY4BA8MYZ0 360 aa11.23□□□□□ -0.61
GARNL3-221ENST00000497703 ARNTP27540 789 aa11.23□□□□□ -0.61
GARNL3-221ENST00000497703 PAGE1O75459 146 aa11.22□□□□□ -0.61
GARNL3-221ENST00000497703 ARHGEF15O94989 841 aa11.22□□□□□ -0.61
GARNL3-221ENST00000497703 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
GARNL3-221ENST00000497703 PRRT3Q5FWE3 981 aa11.22□□□□□ -0.61
GARNL3-221ENST00000497703 LLGL2Q6P1M3 1020 aa11.22□□□□□ -0.61
GARNL3-221ENST00000497703 BEND7Q8N7W2 519 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-221ENST00000497703 C8orf37Q96NL8 207 aa11.22□□□□□ -0.61
GARNL3-221ENST00000497703 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
GARNL3-221ENST00000497703 INPP5FQ9Y2H2 1132 aa11.22□□□□□ -0.61
GARNL3-221ENST00000497703 F6X3S4 739 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.61
GARNL3-221ENST00000497703 RAD51AP2Q09MP3 1159 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 SETDB1Q15047 1291 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 POU4F3Q15319 338 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 AGMOQ6ZNB7 445 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 PLVAPQ9BX97 442 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 USP26Q9BXU7 913 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 MIR1-1HGQ9H1L0 117 aa11.21□□□□□ -0.61
GARNL3-221ENST00000497703 GSTP1P09211 210 aaKnown RBP11.2□□□□□ -0.62
GARNL3-221ENST00000497703 EIF4A3P38919 411 aaKnown RBP11.2□□□□□ -0.62
GARNL3-221ENST00000497703 SNRPNP63162 240 aaKnown RBP11.2□□□□□ -0.62
GARNL3-221ENST00000497703 COL9A3Q14050 684 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-221ENST00000497703 SNAP47Q5SQN1 464 aa11.2□□□□□ -0.62
GARNL3-221ENST00000497703 PHC3Q8NDX5 983 aa11.2□□□□□ -0.62
GARNL3-221ENST00000497703 KLHDC7BQ96G42 594 aa11.2□□□□□ -0.62
GARNL3-221ENST00000497703 SPON2Q9BUD6 331 aa11.2□□□□□ -0.62
GARNL3-221ENST00000497703 TLR6Q9Y2C9 796 aa11.2□□□□□ -0.62
GARNL3-221ENST00000497703 A0A0A0MRY4 1105 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 NLRP12P59046 1061 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 SCARA3Q6AZY7 606 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 FBXO11Q86XK2 927 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 KIAA0825Q8IV33 1275 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 KCNB2Q92953 911 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 ACSBG1Q96GR2 724 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 ACBD3Q9H3P7 528 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 CAPN10Q9HC96 672 aa11.19□□□□□ -0.62
GARNL3-221ENST00000497703 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
GARNL3-221ENST00000497703 HOXB4P17483 251 aaPredicted RBP11.18□□□□□ -0.62
GARNL3-221ENST00000497703 RACK1P63244 317 aaKnown RBP11.18□□□□□ -0.62
GARNL3-221ENST00000497703 LMNB2Q03252 620 aa11.18□□□□□ -0.62
GARNL3-221ENST00000497703 NAALADL2Q58DX5 795 aa11.18□□□□□ -0.62
GARNL3-221ENST00000497703 MAP1SQ66K74 1059 aaPredicted RBP11.18□□□□□ -0.62
GARNL3-221ENST00000497703 LINC00114Q6XXX2 140 aa11.18□□□□□ -0.62
GARNL3-221ENST00000497703 VPS37DQ86XT2 251 aa11.18□□□□□ -0.62
GARNL3-221ENST00000497703 FMR1NBQ8N0W7 255 aaPredicted RBP11.18□□□□□ -0.62
GARNL3-221ENST00000497703 TRIM11Q96F44 468 aa11.18□□□□□ -0.62
GARNL3-221ENST00000497703 BMP6P22004 513 aa11.17□□□□□ -0.62
GARNL3-221ENST00000497703 MAOBP27338 520 aa11.17□□□□□ -0.62
GARNL3-221ENST00000497703 CAMK2GQ13555 558 aaPredicted RBP11.17□□□□□ -0.62
GARNL3-221ENST00000497703 PDE3AQ14432 1141 aa11.17□□□□□ -0.62
GARNL3-221ENST00000497703 HGSNATQ68CP4 663 aa11.17□□□□□ -0.62
GARNL3-221ENST00000497703 TRIM42Q8IWZ5 723 aa11.17□□□□□ -0.62
GARNL3-221ENST00000497703 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
GARNL3-221ENST00000497703 PF4P02776 101 aa11.16□□□□□ -0.62
GARNL3-221ENST00000497703 FAM160A1Q05DH4 1040 aa11.16□□□□□ -0.62
GARNL3-221ENST00000497703 CCDC84Q86UT8 332 aaPredicted RBP11.16□□□□□ -0.62
GARNL3-221ENST00000497703 GOLM1Q8NBJ4 401 aa11.16□□□□□ -0.62
GARNL3-221ENST00000497703 GALNT11Q8NCW6 608 aa11.16□□□□□ -0.62
GARNL3-221ENST00000497703 SCARF2Q96GP6 870 aaPredicted RBP11.16□□□□□ -0.62
GARNL3-221ENST00000497703 RHOVQ96L33 236 aa11.16□□□□□ -0.62
GARNL3-221ENST00000497703 SPATA32Q96LK8 384 aa11.16□□□□□ -0.62
GARNL3-221ENST00000497703 DEAF1O75398 565 aaPredicted RBP11.15□□□□□ -0.62
GARNL3-221ENST00000497703 TRIM37O94972 964 aa11.15□□□□□ -0.62
GARNL3-221ENST00000497703 BPNT1O95861 308 aa11.15□□□□□ -0.62
GARNL3-221ENST00000497703 ELNP15502 786 aa11.15□□□□□ -0.62
GARNL3-221ENST00000497703 TFE3P19532 575 aaPredicted RBP11.15□□□□□ -0.62
GARNL3-221ENST00000497703 DUOXA2Q1HG44 320 aa11.15□□□□□ -0.62
GARNL3-221ENST00000497703 ZNF296Q8WUU4 475 aaPredicted RBP11.15□□□□□ -0.62
GARNL3-221ENST00000497703 ZC3H12CQ9C0D7 883 aaKnown RBP11.15□□□□□ -0.62
GARNL3-221ENST00000497703 KRT82Q9NSB4 513 aa11.15□□□□□ -0.62
GARNL3-221ENST00000497703 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
GARNL3-221ENST00000497703 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
GARNL3-221ENST00000497703 ZNF252P-AS1Q0IIN9 211 aa11.13□□□□□ -0.63
GARNL3-221ENST00000497703 PAK2Q13177 524 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms