RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 MOB2Q70IA6 237 aa24■■□□□ 1.43
ACTN4-208ENST00000497637 EAF2Q96CJ1 260 aaPredicted RBP24■■□□□ 1.43
ACTN4-208ENST00000497637 CHMP3Q9Y3E7 222 aa24■■□□□ 1.43
ACTN4-208ENST00000497637 ZNF609O15014 1411 aa24■■□□□ 1.43
ACTN4-208ENST00000497637 INHBEP58166 350 aa23.99■■□□□ 1.43
ACTN4-208ENST00000497637 GPSM2P81274 684 aa23.99■■□□□ 1.43
ACTN4-208ENST00000497637 OTOP1Q7RTM1 612 aa23.99■■□□□ 1.43
ACTN4-208ENST00000497637 FAM89AQ96GI7 184 aa23.99■■□□□ 1.43
ACTN4-208ENST00000497637 CEP290O15078 2479 aa23.99■■□□□ 1.43
ACTN4-208ENST00000497637 CIAO1O76071 339 aa23.98■■□□□ 1.43
ACTN4-208ENST00000497637 USP17L8P0C7I0 530 aa23.98■■□□□ 1.43
ACTN4-208ENST00000497637 RSBN1LQ6PCB5 846 aaPredicted RBP23.98■■□□□ 1.43
ACTN4-208ENST00000497637 TBC1D16Q8TBP0 767 aa23.98■■□□□ 1.43
ACTN4-208ENST00000497637 MYOZ2Q9NPC6 264 aa23.98■■□□□ 1.43
ACTN4-208ENST00000497637 FBXO3Q9UK99 471 aa23.98■■□□□ 1.43
ACTN4-208ENST00000497637 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.98■■□□□ 1.43
ACTN4-208ENST00000497637 TRIM6-TRIM34B2RNG4 842 aa23.97■■□□□ 1.43
ACTN4-208ENST00000497637 ARMC5Q96C12 935 aa23.97■■□□□ 1.43
ACTN4-208ENST00000497637 R3HDMLQ9H3Y0 253 aa23.97■■□□□ 1.43
ACTN4-208ENST00000497637 CENPFP49454 3210 aa23.97■■□□□ 1.43
ACTN4-208ENST00000497637 A0A0C4DFX4 3053 aa23.97■■□□□ 1.43
ACTN4-208ENST00000497637 LRRC37AA6NMS7 1700 aa23.96■■□□□ 1.43
ACTN4-208ENST00000497637 EYA2O00167 538 aa23.96■■□□□ 1.43
ACTN4-208ENST00000497637 CHMLP26374 656 aa23.96■■□□□ 1.43
ACTN4-208ENST00000497637 IL15P40933 162 aaPredicted RBP23.96■■□□□ 1.43
ACTN4-208ENST00000497637 TFCP2Q12800 502 aa23.96■■□□□ 1.43
ACTN4-208ENST00000497637 SF3B3Q15393 1217 aaKnown RBP23.96■■□□□ 1.43
ACTN4-208ENST00000497637 RILPL2Q969X0 211 aa23.96■■□□□ 1.43
ACTN4-208ENST00000497637 GPR108Q9NPR9 543 aa23.96■■□□□ 1.43
ACTN4-208ENST00000497637 IRS4O14654 1257 aaPredicted RBP23.95■■□□□ 1.42
ACTN4-208ENST00000497637 EN2P19622 333 aaPredicted RBP23.95■■□□□ 1.42
ACTN4-208ENST00000497637 MKRN3Q13064 507 aaKnown RBP23.95■■□□□ 1.42
ACTN4-208ENST00000497637 ATG9AQ7Z3C6 839 aa23.95■■□□□ 1.42
ACTN4-208ENST00000497637 ARMC9Q7Z3E5 817 aa23.95■■□□□ 1.42
ACTN4-208ENST00000497637 CELF1Q92879 486 aaKnown RBP23.95■■□□□ 1.42
ACTN4-208ENST00000497637 ERO1AQ96HE7 468 aa23.95■■□□□ 1.42
ACTN4-208ENST00000497637 TMEM106CQ9BVX2 250 aa23.95■■□□□ 1.42
ACTN4-208ENST00000497637 CCDC8Q9H0W5 538 aaPredicted RBP23.95■■□□□ 1.42
ACTN4-208ENST00000497637 PTPN22Q9Y2R2 807 aa23.95■■□□□ 1.42
ACTN4-208ENST00000497637 PDE8AO60658 829 aa23.94■■□□□ 1.42
ACTN4-208ENST00000497637 CCDC57Q2TAC2 916 aa23.94■■□□□ 1.42
ACTN4-208ENST00000497637 TNNI3KQ59H18 835 aa23.94■■□□□ 1.42
ACTN4-208ENST00000497637 USP26Q9BXU7 913 aa23.94■■□□□ 1.42
ACTN4-208ENST00000497637 PODXL2Q9NZ53 605 aa23.94■■□□□ 1.42
ACTN4-208ENST00000497637 FPGT-TNNI3KV9GXZ4 949 aa23.94■■□□□ 1.42
ACTN4-208ENST00000497637 MANSC4A6NHS7 340 aaPredicted RBP23.93■■□□□ 1.42
ACTN4-208ENST00000497637 REC8O95072 547 aa23.93■■□□□ 1.42
ACTN4-208ENST00000497637 BECN1Q14457 450 aa23.93■■□□□ 1.42
ACTN4-208ENST00000497637 SLC17A8Q8NDX2 589 aa23.93■■□□□ 1.42
ACTN4-208ENST00000497637 GMLQ99445 158 aa23.93■■□□□ 1.42
ACTN4-208ENST00000497637 DAXXQ9UER7 740 aaPredicted RBP23.93■■□□□ 1.42
ACTN4-208ENST00000497637 DDX60Q8IY21 1712 aaKnown RBP23.93■■□□□ 1.42
ACTN4-208ENST00000497637 CUL9Q8IWT3 2517 aa23.92■■□□□ 1.42
ACTN4-208ENST00000497637 SZT2Q5T011 3432 aa23.92■■□□□ 1.42
ACTN4-208ENST00000497637 CTSWP56202 376 aa23.92■■□□□ 1.42
ACTN4-208ENST00000497637 RPS8P62241 208 aaKnown RBP23.92■■□□□ 1.42
ACTN4-208ENST00000497637 SPRYD7Q5W111 196 aa23.92■■□□□ 1.42
ACTN4-208ENST00000497637 ERICH6Q7L0X2 663 aa23.92■■□□□ 1.42
ACTN4-208ENST00000497637 TTLL11Q8NHH1 800 aa23.92■■□□□ 1.42
ACTN4-208ENST00000497637 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
ACTN4-208ENST00000497637 LAMB2P55268 1798 aa23.91■■□□□ 1.42
ACTN4-208ENST00000497637 PRAMEF18Q5VWM3 479 aa23.91■■□□□ 1.42
ACTN4-208ENST00000497637 HSP90B1P14625 803 aaKnown RBP23.9■■□□□ 1.42
ACTN4-208ENST00000497637 IFIT5Q13325 482 aaKnown RBP23.9■■□□□ 1.42
ACTN4-208ENST00000497637 IFNL1Q8IU54 200 aa23.9■■□□□ 1.42
ACTN4-208ENST00000497637 ZNF594Q96JF6 807 aaPredicted RBP23.9■■□□□ 1.42
ACTN4-208ENST00000497637 TLR7Q9NYK1 1049 aaKnown RBP23.9■■□□□ 1.42
ACTN4-208ENST00000497637 ANKIB1Q9P2G1 1089 aa23.9■■□□□ 1.42
ACTN4-208ENST00000497637 GGA1Q9UJY5 639 aa23.9■■□□□ 1.42
ACTN4-208ENST00000497637 BRCA2P51587 3418 aa23.89■■□□□ 1.42
ACTN4-208ENST00000497637 UFL1O94874 794 aa23.89■■□□□ 1.41
ACTN4-208ENST00000497637 LRRC24Q50LG9 513 aa23.89■■□□□ 1.41
ACTN4-208ENST00000497637 OGFOD1Q8N543 542 aa23.89■■□□□ 1.41
ACTN4-208ENST00000497637 EVI5LQ96CN4 794 aa23.89■■□□□ 1.41
ACTN4-208ENST00000497637 RBBP6Q7Z6E9 1792 aaKnown RBP23.88■■□□□ 1.41
ACTN4-208ENST00000497637 USP17L3A6NCW0 530 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 USP17L4A6NCW7 530 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 EPB41L2O43491 1005 aaKnown RBP23.88■■□□□ 1.41
ACTN4-208ENST00000497637 ATP5JP18859 108 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 MMP14P50281 582 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 LDLRAD1Q5T700 205 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 USP17L1Q7RTZ2 530 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 OTUD5Q96G74 571 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 EFCC1Q9HA90 598 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 CEP126Q9P2H0 1117 aa23.88■■□□□ 1.41
ACTN4-208ENST00000497637 DBNLQ9UJU6 430 aaKnown RBP23.88■■□□□ 1.41
ACTN4-208ENST00000497637 ANKRD18BA2A2Z9 1011 aa23.87■■□□□ 1.41
ACTN4-208ENST00000497637 H0YGN5 161 aa23.87■■□□□ 1.41
ACTN4-208ENST00000497637 MAP4K4O95819 1239 aaPredicted RBP23.87■■□□□ 1.41
ACTN4-208ENST00000497637 TAF7LQ5H9L4 462 aa23.87■■□□□ 1.41
ACTN4-208ENST00000497637 OTUD7BQ6GQQ9 843 aa23.87■■□□□ 1.41
ACTN4-208ENST00000497637 PODNQ7Z5L7 613 aa23.87■■□□□ 1.41
ACTN4-208ENST00000497637 NBPF11Q86T75 865 aa23.87■■□□□ 1.41
ACTN4-208ENST00000497637 KIF2CQ99661 725 aa23.87■■□□□ 1.41
ACTN4-208ENST00000497637 PUS3Q9BZE2 481 aaKnown RBP23.87■■□□□ 1.41
ACTN4-208ENST00000497637 SCAF8Q9UPN6 1271 aaKnown RBP23.87■■□□□ 1.41
ACTN4-208ENST00000497637 ZBTB48P10074 688 aaPredicted RBP23.86■■□□□ 1.41
ACTN4-208ENST00000497637 ARHGEF6Q15052 776 aa23.86■■□□□ 1.41
ACTN4-208ENST00000497637 NBPF9Q3BBW0 867 aa23.86■■□□□ 1.41
ACTN4-208ENST00000497637 SLC10A4Q96EP9 437 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms