RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SYKP43405 635 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 LRRIQ3A6PVS8 624 aaPredicted RBP14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 ZMYND10O75800 440 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 ATP6V1AP38606 617 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 LINC00301Q8NCQ3 95 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 FAM71BQ8TC56 605 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 C8orf76Q96K31 380 aa14.96□□□□□ -0.01
GAPVD1-220ENST00000497580 EDC4Q6P2E9 1401 aaKnown RBP14.96□□□□□ -0.02
GAPVD1-220ENST00000497580 CCDC175P0C221 793 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 ZNF827Q17R98 1081 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 DDX46Q7L014 1031 aaKnown RBP14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 CLIC6Q96NY7 704 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 RAI14Q9P0K7 980 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 SUFUQ9UMX1 484 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 L1RE1Q9UN81 338 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 A0A087WUV0 522 aaPredicted RBP14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 CTAGE15A4D2H0 777 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 CTAGE8P0CG41 777 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 CTAGE6Q86UF2 777 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 CTAGE4Q8IX94 777 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 KAT2BQ92831 832 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 CDC5LQ99459 802 aaKnown RBP14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 GNAT3A8MTJ3 354 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 MMP14P50281 582 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 SPECC1Q5M775 1068 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 CEP112Q8N8E3 955 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 GPHNQ9NQX3 736 aaPredicted RBP14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 PRR36Q9H6K5 1346 aa14.95□□□□□ -0.02
GAPVD1-220ENST00000497580 TDO2P48775 406 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 EHD4Q9H223 541 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 METP08581 1390 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 NPHP4O75161 1426 aaPredicted RBP14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 ANKRD26Q9UPS8 1709 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 BEND3Q5T5X7 828 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 JPH2Q9BR39 696 aaPredicted RBP14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 CDC23Q9UJX2 597 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 SAMM50Q9Y512 469 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 PFKFB2O60825 505 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 KCNG4Q8TDN1 519 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 HSD3B7Q9H2F3 369 aa14.94□□□□□ -0.02
GAPVD1-220ENST00000497580 A0A0G2JLW4 131 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 CEBPAP49715 358 aaPredicted RBP14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 STOX1Q6ZVD7 989 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 TMEM139Q8IV31 216 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 GSPT2Q8IYD1 628 aaKnown RBP14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 SLC35F6Q8N357 371 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 KIF20BQ96Q89 1820 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 SASH1O94885 1247 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 SETQ01105 290 aaPredicted RBP14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 NCAPH2Q6IBW4 605 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 NOA1Q8NC60 698 aaKnown RBP14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 SMARCC2Q8TAQ2 1214 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 CENPHQ9H3R5 247 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 EBAG9O00559 213 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 CPLX1O14810 134 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 PPARDQ03181 441 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 KLHL10Q6JEL2 608 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 FCHSD1Q86WN1 690 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 BPIFA3Q9BQP9 254 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 INTS13Q9NVM9 706 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 RTEL1Q9NZ71 1219 aa14.93□□□□□ -0.02
GAPVD1-220ENST00000497580 CTAGE9A4FU28 777 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 KCNQ3O43525 872 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 ECM2O94769 699 aaPredicted RBP14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 EIF5P55010 431 aaKnown RBP14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 ABTB2Q8N961 1025 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 TC2NQ8N9U0 490 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 GBP3Q9H0R5 595 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 MAP3K2Q9Y2U5 619 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 NFE2L3Q9Y4A8 694 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 IKBKBO14920 756 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 STX10O60499 249 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 HNRNPH1P31943 449 aaKnown RBP14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 MPRIPQ6WCQ1 1025 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 IL17REQ8NFR9 667 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 EXOC5O00471 708 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 FKBP15Q5T1M5 1219 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 SPECC1LQ69YQ0 1117 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 IGSF22Q8N9C0 903 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 GIMAP7Q8NHV1 300 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 FAM169AQ9Y6X4 670 aa14.92□□□□□ -0.02
GAPVD1-220ENST00000497580 ARHGEF10O15013 1369 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 MROH7-TTC4A0A0A0MT08 1334 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 USP42Q9H9J4 1324 aaKnown RBP14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 A0A1W2PQ27 194 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 A0A1W2PQ64 194 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 A0A1W2PQD8 194 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 DHX32Q7L7V1 743 aaKnown RBP14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 CRACR2AQ9BSW2 395 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 POLD4Q9HCU8 107 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 CPS1P31327 1500 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 FOXN1O15353 648 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 ATP2B2Q01814 1243 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 PDE4BQ07343 736 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 MYSM1Q5VVJ2 828 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 PPFIBP1Q86W92 1011 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 CAPN7Q9Y6W3 813 aa14.91□□□□□ -0.02
GAPVD1-220ENST00000497580 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms