RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	FMNL1	O95466	1100 aa	Predicted RBP	14.16	□□□□□ -0.14
SKAP2-209	ENST00000497511	PROSER3	Q2NL68	480 aa		14.16	□□□□□ -0.14
SKAP2-209	ENST00000497511	COPS6	Q7L5N1	327 aa		14.16	□□□□□ -0.14
SKAP2-209	ENST00000497511	XAGE3	Q8WTP9	111 aa		14.16	□□□□□ -0.14
SKAP2-209	ENST00000497511	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	14.16	□□□□□ -0.14
SKAP2-209	ENST00000497511	RNF186	Q9NXI6	227 aa		14.16	□□□□□ -0.14
SKAP2-209	ENST00000497511	RPS12	P25398	132 aa	Known RBP	14.15	□□□□□ -0.14
SKAP2-209	ENST00000497511	EYA3	Q99504	573 aa		14.15	□□□□□ -0.14
SKAP2-209	ENST00000497511	SPSB2	Q99619	263 aa		14.15	□□□□□ -0.14
SKAP2-209	ENST00000497511	KDM3B	Q7LBC6	1761 aa		14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	FAM155A	B1AL88	458 aa	Predicted RBP	14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	ECE2	O60344	883 aa		14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	TCIRG1	Q13488	830 aa		14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	KIF4B	Q2VIQ3	1234 aa		14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	TPRN	Q4KMQ1	711 aa		14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	PPP1R18	Q6NYC8	613 aa		14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	CTU1	Q7Z7A3	348 aa	Known RBP	14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	GGA3	Q9NZ52	723 aa		14.14	□□□□□ -0.15
SKAP2-209	ENST00000497511	TLL1	O43897	1013 aa		14.13	□□□□□ -0.15
SKAP2-209	ENST00000497511	EGFR	P00533	1210 aa		14.13	□□□□□ -0.15
SKAP2-209	ENST00000497511	MS4A1	P11836	297 aa		14.13	□□□□□ -0.15
SKAP2-209	ENST00000497511	LRP10	Q7Z4F1	713 aa		14.13	□□□□□ -0.15
SKAP2-209	ENST00000497511	PLEKHF1	Q96S99	279 aa		14.13	□□□□□ -0.15
SKAP2-209	ENST00000497511	HDAC9	Q9UKV0	1011 aa		14.13	□□□□□ -0.15
SKAP2-209	ENST00000497511	PDE4DIP	Q5VU43	2346 aa		14.12	□□□□□ -0.15
SKAP2-209	ENST00000497511	RIPK4	P57078	832 aa		14.12	□□□□□ -0.15
SKAP2-209	ENST00000497511	PRPF38B	Q5VTL8	546 aa	Known RBP	14.12	□□□□□ -0.15
SKAP2-209	ENST00000497511	SPIRE2	Q8WWL2	714 aa		14.12	□□□□□ -0.15
SKAP2-209	ENST00000497511	CELF1	Q92879	486 aa	Known RBP	14.12	□□□□□ -0.15
SKAP2-209	ENST00000497511	CSRNP1	Q96S65	589 aa		14.12	□□□□□ -0.15
SKAP2-209	ENST00000497511	ZC3H12C	Q9C0D7	883 aa	Known RBP	14.12	□□□□□ -0.15
SKAP2-209	ENST00000497511	GPSM2	P81274	684 aa		14.11	□□□□□ -0.15
SKAP2-209	ENST00000497511	RTL5	Q5HYW3	569 aa	Predicted RBP	14.11	□□□□□ -0.15
SKAP2-209	ENST00000497511	BRICD5	Q6PL45	260 aa		14.11	□□□□□ -0.15
SKAP2-209	ENST00000497511	THAP11	Q96EK4	314 aa		14.11	□□□□□ -0.15
SKAP2-209	ENST00000497511	CDCA5	Q96FF9	252 aa		14.11	□□□□□ -0.15
SKAP2-209	ENST00000497511	FAM89A	Q96GI7	184 aa		14.11	□□□□□ -0.15
SKAP2-209	ENST00000497511	LMOD3	Q0VAK6	560 aa		14.1	□□□□□ -0.15
SKAP2-209	ENST00000497511	SLC6A16	Q9GZN6	736 aa		14.1	□□□□□ -0.15
SKAP2-209	ENST00000497511	KCNQ5	Q9NR82	932 aa		14.1	□□□□□ -0.15
SKAP2-209	ENST00000497511	POLL	Q9UGP5	575 aa		14.1	□□□□□ -0.15
SKAP2-209	ENST00000497511	LAS1L	Q9Y4W2	734 aa	Known RBP	14.1	□□□□□ -0.15
SKAP2-209	ENST00000497511	ANGEL2	Q5VTE6	544 aa	Known RBP	14.09	□□□□□ -0.15
SKAP2-209	ENST00000497511	BABAM1	Q9NWV8	329 aa		14.09	□□□□□ -0.15
SKAP2-209	ENST00000497511	ANKIB1	Q9P2G1	1089 aa		14.09	□□□□□ -0.15
SKAP2-209	ENST00000497511	DUOX1	Q9NRD9	1551 aa		14.09	□□□□□ -0.15
SKAP2-209	ENST00000497511	RTL9	Q8NET4	1388 aa		14.09	□□□□□ -0.15
SKAP2-209	ENST00000497511	ATP5J2-PTCD1	G3V325	749 aa		14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	UFL1	O94874	794 aa		14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	SCARF1	Q14162	830 aa		14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	SF3B3	Q15393	1217 aa	Known RBP	14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	RASAL3	Q86YV0	1011 aa		14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	TBC1D16	Q8TBP0	767 aa		14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	CHPF2	Q9P2E5	772 aa		14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	ASTN2	O75129	1339 aa	Predicted RBP	14.08	□□□□□ -0.16
SKAP2-209	ENST00000497511	VIL1	P09327	827 aa	Known RBP	14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	GJA5	P36382	358 aa		14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	RPS8	P62241	208 aa	Known RBP	14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	FKBP1B	P68106	108 aa		14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	PKN2	Q16513	984 aa	Known RBP	14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	HDGFL1	Q5TGJ6	251 aa		14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	PLBD2	Q8NHP8	589 aa		14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	TBC1D2	Q9BYX2	928 aa		14.07	□□□□□ -0.16
SKAP2-209	ENST00000497511	DLG5	Q8TDM6	1919 aa		14.06	□□□□□ -0.16
SKAP2-209	ENST00000497511	IRS4	O14654	1257 aa	Predicted RBP	14.06	□□□□□ -0.16
SKAP2-209	ENST00000497511	TBC1D8	O95759	1140 aa		14.06	□□□□□ -0.16
SKAP2-209	ENST00000497511	FDX1	P10109	184 aa		14.06	□□□□□ -0.16
SKAP2-209	ENST00000497511	NEUROD2	Q15784	382 aa		14.06	□□□□□ -0.16
SKAP2-209	ENST00000497511	GGA1	Q9UJY5	639 aa		14.06	□□□□□ -0.16
SKAP2-209	ENST00000497511	ANKRD36C	Q5JPF3	1778 aa		14.06	□□□□□ -0.16
SKAP2-209	ENST00000497511	LAMB2	P55268	1798 aa		14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	S1PR4	O95977	384 aa		14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	HSP90B1	P14625	803 aa	Known RBP	14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	KRT24	Q2M2I5	525 aa		14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	MSS51	Q4VC12	460 aa		14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	RSBN1L	Q6PCB5	846 aa	Predicted RBP	14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	AGBL3	Q8NEM8	1001 aa		14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	ZNF296	Q8WUU4	475 aa	Predicted RBP	14.05	□□□□□ -0.16
SKAP2-209	ENST00000497511	USP17L8	P0C7I0	530 aa		14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	NF2	P35240	595 aa		14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	TMPO	P42166	694 aa	Known RBP	14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	RNF19B	Q6ZMZ0	732 aa		14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	ANKLE1	Q8NAG6	615 aa		14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	ISCA1	Q9BUE6	129 aa		14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	KDM4C	Q9H3R0	1056 aa		14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	MYOZ2	Q9NPC6	264 aa		14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	DBF4	Q9UBU7	674 aa	Predicted RBP	14.04	□□□□□ -0.16
SKAP2-209	ENST00000497511	RNF223	E7ERA6	249 aa		14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	UBE2Q2L	H0YL09	131 aa		14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	ZNF280A	P59817	542 aa	Predicted RBP	14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	MOB2	Q70IA6	237 aa		14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	RIC3	Q7Z5B4	369 aa		14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	HLA-C	Q95604	372 aa		14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	USB1	Q9BQ65	265 aa	Known RBP	14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	PODXL2	Q9NZ53	605 aa		14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	SCAF8	Q9UPN6	1271 aa	Known RBP	14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	TNRC18	O15417	2968 aa	Predicted RBP	14.03	□□□□□ -0.16
SKAP2-209	ENST00000497511	TAF1	P21675	1872 aa		14.02	□□□□□ -0.16
SKAP2-209	ENST00000497511	LRRC37A	A6NMS7	1700 aa		14.02	□□□□□ -0.16
SKAP2-209	ENST00000497511	MOXD2P	A6NHM9	499 aa		14.02	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms