RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ARMC9Q7Z3E5 817 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 DZIP1LQ8IYY4 767 aaKnown RBP17.83■□□□□ 0.44
VTI1A-209ENST00000496445 LPIN2Q92539 896 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 ZNF70Q9UC06 446 aaPredicted RBP17.83■□□□□ 0.44
VTI1A-209ENST00000496445 FBXO3Q9UK99 471 aa17.83■□□□□ 0.44
VTI1A-209ENST00000496445 PA2G4Q9UQ80 394 aaKnown RBP17.83■□□□□ 0.44
VTI1A-209ENST00000496445 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
VTI1A-209ENST00000496445 SLC5A1P13866 664 aa17.82■□□□□ 0.44
VTI1A-209ENST00000496445 MKRN3Q13064 507 aaKnown RBP17.82■□□□□ 0.44
VTI1A-209ENST00000496445 RASA3Q14644 834 aa17.82■□□□□ 0.44
VTI1A-209ENST00000496445 NBPF12Q5TAG4 269 aaPredicted RBP17.82■□□□□ 0.44
VTI1A-209ENST00000496445 REM2Q8IYK8 340 aaPredicted RBP17.82■□□□□ 0.44
VTI1A-209ENST00000496445 TBC1D22AQ8WUA7 517 aa17.82■□□□□ 0.44
VTI1A-209ENST00000496445 TDRD3Q9H7E2 651 aaKnown RBP17.82■□□□□ 0.44
VTI1A-209ENST00000496445 FRAT2O75474 233 aaPredicted RBP17.81■□□□□ 0.44
VTI1A-209ENST00000496445 CDAN1Q8IWY9 1227 aa17.81■□□□□ 0.44
VTI1A-209ENST00000496445 MCOLN1Q9GZU1 580 aa17.81■□□□□ 0.44
VTI1A-209ENST00000496445 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
VTI1A-209ENST00000496445 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
VTI1A-209ENST00000496445 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
VTI1A-209ENST00000496445 CLMNQ96JQ2 1002 aa17.8■□□□□ 0.44
VTI1A-209ENST00000496445 TEPSINQ96N21 525 aa17.8■□□□□ 0.44
VTI1A-209ENST00000496445 COPRSQ9NQ92 184 aa17.8■□□□□ 0.44
VTI1A-209ENST00000496445 KCNA4P22459 653 aa17.79■□□□□ 0.44
VTI1A-209ENST00000496445 IL15P40933 162 aaPredicted RBP17.79■□□□□ 0.44
VTI1A-209ENST00000496445 HDLBPQ00341 1268 aaKnown RBP17.79■□□□□ 0.44
VTI1A-209ENST00000496445 TNFAIP1Q13829 316 aa17.79■□□□□ 0.44
VTI1A-209ENST00000496445 SUPT20HL1Q3ZLR7 823 aa17.79■□□□□ 0.44
VTI1A-209ENST00000496445 SPRYD7Q5W111 196 aa17.79■□□□□ 0.44
VTI1A-209ENST00000496445 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
VTI1A-209ENST00000496445 TCP10L2B9ZVM9 353 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 PPP1R12BO60237 982 aaPredicted RBP17.78■□□□□ 0.44
VTI1A-209ENST00000496445 GNAI3P08754 354 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 TM4SF4P48230 202 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 MTX1Q13505 466 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 FRAT1Q92837 279 aaPredicted RBP17.78■□□□□ 0.44
VTI1A-209ENST00000496445 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 TMEM39BQ9GZU3 492 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 CEP126Q9P2H0 1117 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 SUGT1Q9Y2Z0 365 aa17.78■□□□□ 0.44
VTI1A-209ENST00000496445 IPO8O15397 1037 aaKnown RBP17.77■□□□□ 0.44
VTI1A-209ENST00000496445 USP2O75604 605 aaPredicted RBP17.77■□□□□ 0.44
VTI1A-209ENST00000496445 CACNB3P54284 484 aa17.77■□□□□ 0.44
VTI1A-209ENST00000496445 DGKZQ13574 1117 aa17.77■□□□□ 0.44
VTI1A-209ENST00000496445 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.44
VTI1A-209ENST00000496445 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
VTI1A-209ENST00000496445 ZDHHC15Q96MV8 337 aa17.77■□□□□ 0.44
VTI1A-209ENST00000496445 MAST3O60307 1309 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 HTTP42858 3142 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 SRGAP3O43295 1099 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 ADORA1P30542 326 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 PHKA1P46020 1223 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 WNK4Q96J92 1243 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 MRIQ9BWK5 157 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 MYH2Q9UKX2 1941 aa17.76■□□□□ 0.43
VTI1A-209ENST00000496445 UNCXA6NJT0 531 aa17.75■□□□□ 0.43
VTI1A-209ENST00000496445 TBC1D8O95759 1140 aa17.75■□□□□ 0.43
VTI1A-209ENST00000496445 ZBTB48P10074 688 aaPredicted RBP17.75■□□□□ 0.43
VTI1A-209ENST00000496445 GJA5P36382 358 aa17.75■□□□□ 0.43
VTI1A-209ENST00000496445 IREB2P48200 963 aaKnown RBP17.75■□□□□ 0.43
VTI1A-209ENST00000496445 WDR66Q8TBY9 1149 aa17.75■□□□□ 0.43
VTI1A-209ENST00000496445 SLC10A4Q96EP9 437 aa17.75■□□□□ 0.43
VTI1A-209ENST00000496445 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.75■□□□□ 0.43
VTI1A-209ENST00000496445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.75■□□□□ 0.43
VTI1A-209ENST00000496445 PRDX5P30044 214 aa17.74■□□□□ 0.43
VTI1A-209ENST00000496445 TNNI2P48788 182 aa17.74■□□□□ 0.43
VTI1A-209ENST00000496445 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
VTI1A-209ENST00000496445 HHIPL2Q6UWX4 724 aa17.74■□□□□ 0.43
VTI1A-209ENST00000496445 TMEM57Q8N5G2 664 aa17.74■□□□□ 0.43
VTI1A-209ENST00000496445 RPAP1Q9BWH6 1393 aaPredicted RBP17.74■□□□□ 0.43
VTI1A-209ENST00000496445 SALL1Q9NSC2 1324 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 PNMA6EA0A0J9YXQ4 647 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 ZBTB22O15209 634 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 GNAI2P04899 355 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 DIXDC1Q155Q3 683 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 CCDC102BQ68D86 513 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 ANKRD13AQ8IZ07 590 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 CFHR5Q9BXR6 569 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 R3HDMLQ9H3Y0 253 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 DAGLAQ9Y4D2 1042 aa17.73■□□□□ 0.43
VTI1A-209ENST00000496445 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
VTI1A-209ENST00000496445 DOCK2Q92608 1830 aa17.72■□□□□ 0.43
VTI1A-209ENST00000496445 TNRC18O15417 2968 aaPredicted RBP17.72■□□□□ 0.43
VTI1A-209ENST00000496445 MANSC4A6NHS7 340 aaPredicted RBP17.72■□□□□ 0.43
VTI1A-209ENST00000496445 CCDC85CA6NKD9 419 aa17.72■□□□□ 0.43
VTI1A-209ENST00000496445 TFCP2Q12800 502 aa17.72■□□□□ 0.43
VTI1A-209ENST00000496445 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.72■□□□□ 0.43
VTI1A-209ENST00000496445 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
VTI1A-209ENST00000496445 GNL3LQ9NVN8 582 aaKnown RBP17.72■□□□□ 0.43
VTI1A-209ENST00000496445 DENND2AQ9ULE3 1009 aa17.72■□□□□ 0.43
VTI1A-209ENST00000496445 CENPFP49454 3210 aa17.72■□□□□ 0.43
VTI1A-209ENST00000496445 A0A1B0GUL7 405 aa17.71■□□□□ 0.43
VTI1A-209ENST00000496445 IGF2BP3O00425 579 aaKnown RBP eCLIP17.71■□□□□ 0.43
VTI1A-209ENST00000496445 SEMA3EO15041 775 aa17.71■□□□□ 0.43
VTI1A-209ENST00000496445 TIMM10P62072 90 aa17.71■□□□□ 0.43
VTI1A-209ENST00000496445 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
VTI1A-209ENST00000496445 FKBP1CQ5VVH2 108 aa17.71■□□□□ 0.43
VTI1A-209ENST00000496445 CTU1Q7Z7A3 348 aaKnown RBP17.71■□□□□ 0.43
VTI1A-209ENST00000496445 FAM83AQ86UY5 434 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms