RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 PHKA1P46020 1223 aa25.51■■□□□ 1.67
COL9A2-211ENST00000496215 MAP2K1Q02750 393 aaPredicted RBP25.51■■□□□ 1.67
COL9A2-211ENST00000496215 WDR66Q8TBY9 1149 aa25.51■■□□□ 1.67
COL9A2-211ENST00000496215 CRKP46108 304 aa25.5■■□□□ 1.67
COL9A2-211ENST00000496215 FKBP1BP68106 108 aa25.5■■□□□ 1.67
COL9A2-211ENST00000496215 OS9Q13438 667 aaPredicted RBP25.5■■□□□ 1.67
COL9A2-211ENST00000496215 CCDC102BQ68D86 513 aa25.5■■□□□ 1.67
COL9A2-211ENST00000496215 VEZTQ9HBM0 779 aa25.5■■□□□ 1.67
COL9A2-211ENST00000496215 DDX19BQ9UMR2 479 aa25.5■■□□□ 1.67
COL9A2-211ENST00000496215 SUGT1Q9Y2Z0 365 aa25.5■■□□□ 1.67
COL9A2-211ENST00000496215 HSPA8P11142 646 aaKnown RBP25.49■■□□□ 1.67
COL9A2-211ENST00000496215 TIMM10P62072 90 aa25.49■■□□□ 1.67
COL9A2-211ENST00000496215 CEP85Q6P2H3 762 aa25.49■■□□□ 1.67
COL9A2-211ENST00000496215 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.49■■□□□ 1.67
COL9A2-211ENST00000496215 TEKT1Q969V4 418 aa25.49■■□□□ 1.67
COL9A2-211ENST00000496215 DENND2AQ9ULE3 1009 aa25.49■■□□□ 1.67
COL9A2-211ENST00000496215 PPP2R3BQ9Y5P8 575 aa25.49■■□□□ 1.67
COL9A2-211ENST00000496215 HDLBPQ00341 1268 aaKnown RBP25.48■■□□□ 1.67
COL9A2-211ENST00000496215 AIDAQ96BJ3 306 aa25.48■■□□□ 1.67
COL9A2-211ENST00000496215 XAGE2Q96GT9 111 aa25.48■■□□□ 1.67
COL9A2-211ENST00000496215 DEFB129Q9H1M3 183 aa25.48■■□□□ 1.67
COL9A2-211ENST00000496215 FZD1Q9UP38 647 aa25.48■■□□□ 1.67
COL9A2-211ENST00000496215 COG6Q9Y2V7 657 aa25.48■■□□□ 1.67
COL9A2-211ENST00000496215 UBE2Q2LH0YL09 131 aa25.47■■□□□ 1.67
COL9A2-211ENST00000496215 SLC10A3P09131 477 aa25.47■■□□□ 1.67
COL9A2-211ENST00000496215 ZNF157P51786 506 aaPredicted RBP25.47■■□□□ 1.67
COL9A2-211ENST00000496215 SPDYE2Q495Y8 402 aa25.47■■□□□ 1.67
COL9A2-211ENST00000496215 NEUROD6Q96NK8 337 aa25.47■■□□□ 1.67
COL9A2-211ENST00000496215 SALL1Q9NSC2 1324 aa25.46■■□□□ 1.67
COL9A2-211ENST00000496215 ZBTB22O15209 634 aa25.46■■□□□ 1.67
COL9A2-211ENST00000496215 SURF6O75683 361 aaKnown RBP25.46■■□□□ 1.67
COL9A2-211ENST00000496215 CTCFP49711 727 aaPredicted RBP25.46■■□□□ 1.67
COL9A2-211ENST00000496215 LBX1P52954 281 aa25.46■■□□□ 1.67
COL9A2-211ENST00000496215 NOGQ13253 232 aa25.46■■□□□ 1.67
COL9A2-211ENST00000496215 TNFAIP1Q13829 316 aa25.46■■□□□ 1.67
COL9A2-211ENST00000496215 TTLL12Q14166 644 aaPredicted RBP25.46■■□□□ 1.67
COL9A2-211ENST00000496215 RASAL3Q86YV0 1011 aa25.46■■□□□ 1.67
COL9A2-211ENST00000496215 TDRD3Q9H7E2 651 aaKnown RBP25.46■■□□□ 1.67
COL9A2-211ENST00000496215 PDS5AQ29RF7 1337 aaKnown RBP25.45■■□□□ 1.66
COL9A2-211ENST00000496215 RASGRF1Q13972 1273 aa25.45■■□□□ 1.66
COL9A2-211ENST00000496215 GORABQ5T7V8 394 aa25.45■■□□□ 1.66
COL9A2-211ENST00000496215 YTHDC1Q96MU7 727 aaKnown RBP25.45■■□□□ 1.66
COL9A2-211ENST00000496215 ZNF70Q9UC06 446 aaPredicted RBP25.45■■□□□ 1.66
COL9A2-211ENST00000496215 PRKG1Q13976 671 aa25.44■■□□□ 1.66
COL9A2-211ENST00000496215 CHMP4BQ9H444 224 aaKnown RBP25.44■■□□□ 1.66
COL9A2-211ENST00000496215 TSKSQ9UJT2 592 aa25.44■■□□□ 1.66
COL9A2-211ENST00000496215 LDHBP07195 334 aaKnown RBP25.43■■□□□ 1.66
COL9A2-211ENST00000496215 PRDX5P30044 214 aa25.43■■□□□ 1.66
COL9A2-211ENST00000496215 KIF23Q02241 960 aaPredicted RBP25.43■■□□□ 1.66
COL9A2-211ENST00000496215 CDAN1Q8IWY9 1227 aa25.43■■□□□ 1.66
COL9A2-211ENST00000496215 ZGPATQ8N5A5 531 aaKnown RBP25.43■■□□□ 1.66
COL9A2-211ENST00000496215 CCDC102AQ96A19 550 aa25.43■■□□□ 1.66
COL9A2-211ENST00000496215 ZDHHC15Q96MV8 337 aa25.43■■□□□ 1.66
COL9A2-211ENST00000496215 GPR108Q9NPR9 543 aa25.43■■□□□ 1.66
COL9A2-211ENST00000496215 NOP58Q9Y2X3 529 aaKnown RBP25.43■■□□□ 1.66
COL9A2-211ENST00000496215 OTOFQ9HC10 1997 aa25.42■■□□□ 1.66
COL9A2-211ENST00000496215 PDE3AQ14432 1141 aa25.42■■□□□ 1.66
COL9A2-211ENST00000496215 MRIQ9BWK5 157 aa25.42■■□□□ 1.66
COL9A2-211ENST00000496215 PRDM10Q9NQV6 1147 aa25.42■■□□□ 1.66
COL9A2-211ENST00000496215 MAST2Q6P0Q8 1798 aa25.41■■□□□ 1.66
COL9A2-211ENST00000496215 RASA3Q14644 834 aa25.41■■□□□ 1.66
COL9A2-211ENST00000496215 TNNI3KQ59H18 835 aa25.41■■□□□ 1.66
COL9A2-211ENST00000496215 NBPF12Q5TAG4 269 aaPredicted RBP25.41■■□□□ 1.66
COL9A2-211ENST00000496215 HHIPL2Q6UWX4 724 aa25.41■■□□□ 1.66
COL9A2-211ENST00000496215 ZBTB40Q9NUA8 1239 aa25.41■■□□□ 1.66
COL9A2-211ENST00000496215 TMOD2Q9NZR1 351 aa25.41■■□□□ 1.66
COL9A2-211ENST00000496215 FPGT-TNNI3KV9GXZ4 949 aa25.41■■□□□ 1.66
COL9A2-211ENST00000496215 TNNI2P48788 182 aa25.4■■□□□ 1.66
COL9A2-211ENST00000496215 C20orf194Q5TEA3 1177 aa25.4■■□□□ 1.66
COL9A2-211ENST00000496215 ARMC9Q7Z3E5 817 aa25.4■■□□□ 1.66
COL9A2-211ENST00000496215 TEPSINQ96N21 525 aa25.4■■□□□ 1.66
COL9A2-211ENST00000496215 BEGAINQ9BUH8 593 aa25.4■■□□□ 1.66
COL9A2-211ENST00000496215 TCP10L2B9ZVM9 353 aa25.39■■□□□ 1.66
COL9A2-211ENST00000496215 CACNB3P54284 484 aa25.39■■□□□ 1.66
COL9A2-211ENST00000496215 SUPT20HL1Q3ZLR7 823 aa25.39■■□□□ 1.66
COL9A2-211ENST00000496215 LDLRAD1Q5T700 205 aa25.39■■□□□ 1.66
COL9A2-211ENST00000496215 APOBEC3HQ6NTF7 200 aaKnown RBP25.39■■□□□ 1.66
COL9A2-211ENST00000496215 TNS4Q8IZW8 715 aa25.39■■□□□ 1.66
COL9A2-211ENST00000496215 MYH2Q9UKX2 1941 aa25.39■■□□□ 1.65
COL9A2-211ENST00000496215 ARID4AP29374 1257 aaPredicted RBP25.38■■□□□ 1.65
COL9A2-211ENST00000496215 DIXDC1Q155Q3 683 aa25.38■■□□□ 1.65
COL9A2-211ENST00000496215 ERC1Q8IUD2 1116 aa25.38■■□□□ 1.65
COL9A2-211ENST00000496215 ABCF2Q9UG63 623 aa25.38■■□□□ 1.65
COL9A2-211ENST00000496215 ANGEL1Q9UNK9 670 aaKnown RBP25.38■■□□□ 1.65
COL9A2-211ENST00000496215 EXOC6BQ9Y2D4 811 aa25.38■■□□□ 1.65
COL9A2-211ENST00000496215 DAGLAQ9Y4D2 1042 aa25.38■■□□□ 1.65
COL9A2-211ENST00000496215 HMMRO75330 724 aa25.37■■□□□ 1.65
COL9A2-211ENST00000496215 UQCRFS1P1P0C7P4 283 aa25.37■■□□□ 1.65
COL9A2-211ENST00000496215 MAP3K11Q16584 847 aa25.37■■□□□ 1.65
COL9A2-211ENST00000496215 DZIP1Q86YF9 867 aaKnown RBP25.37■■□□□ 1.65
COL9A2-211ENST00000496215 RPAP2Q8IXW5 612 aaPredicted RBP25.37■■□□□ 1.65
COL9A2-211ENST00000496215 SPATA5Q8NB90 893 aa25.37■■□□□ 1.65
COL9A2-211ENST00000496215 CSRNP1Q96S65 589 aa25.37■■□□□ 1.65
COL9A2-211ENST00000496215 HMG20BQ9P0W2 317 aa25.37■■□□□ 1.65
COL9A2-211ENST00000496215 AKAP11Q9UKA4 1901 aa25.36■■□□□ 1.65
COL9A2-211ENST00000496215 PPP1R12BO60237 982 aaPredicted RBP25.36■■□□□ 1.65
COL9A2-211ENST00000496215 HSP90AB4PQ58FF6 505 aa25.36■■□□□ 1.65
COL9A2-211ENST00000496215 SPTY2D1Q68D10 685 aaPredicted RBP25.36■■□□□ 1.65
COL9A2-211ENST00000496215 DBNDD2Q9BQY9 259 aa25.36■■□□□ 1.65
COL9A2-211ENST00000496215 TMEM39BQ9GZU3 492 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms