RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	PRMT6	Q96LA8	375 aa	Predicted RBP	12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	HMG20B	Q9P0W2	317 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	DBNL	Q9UJU6	430 aa	Known RBP	12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	TRPM7	Q96QT4	1865 aa		12.06	□□□□□ -0.48
CALD1-223	ENST00000496024	SPDYE2B	A6NHP3	402 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	CELF2	O95319	508 aa	Known RBP	12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	UQCRFS1P1	P0C7P4	283 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	SPDYE6	P0CI01	402 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	ARID4A	P29374	1257 aa	Predicted RBP	12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	MCAM	P43121	646 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	MMP14	P50281	582 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	PRAMEF18	Q5VWM3	479 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	TBC1D9	Q6ZT07	1266 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	VEZT	Q9HBM0	779 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	SERPINA10	Q9UK55	444 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	AOX1	Q06278	1338 aa		12.05	□□□□□ -0.48
CALD1-223	ENST00000496024	TMEM88B	A6NKF7	163 aa		12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	MYO1B	O43795	1136 aa		12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	IFIT2	P09913	472 aa	Known RBP	12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	DIXDC1	Q155Q3	683 aa		12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	MTMR14	Q8NCE2	650 aa		12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	TEKT1	Q969V4	418 aa		12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	ZBED3	Q96IU2	234 aa	Predicted RBP	12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	LRRCC1	Q9C099	1032 aa		12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	TDRD3	Q9H7E2	651 aa	Known RBP	12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	ABT1	Q9ULW3	272 aa	Known RBP	12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	MAST3	O60307	1309 aa		12.04	□□□□□ -0.48
CALD1-223	ENST00000496024	CST9	Q5W186	159 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	ERICH6	Q7L0X2	663 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	DZIP1	Q86YF9	867 aa	Known RBP	12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	ZGPAT	Q8N5A5	531 aa	Known RBP	12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	CDCA5	Q96FF9	252 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	DCTPP1	Q9H773	170 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	CREBZF	Q9NS37	354 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	SUGT1	Q9Y2Z0	365 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	NDUFB9	Q9Y6M9	179 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	PITPNM2	Q9BZ72	1349 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	SALL1	Q9NSC2	1324 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	AKAP11	Q9UKA4	1901 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	MYH2	Q9UKX2	1941 aa		12.03	□□□□□ -0.48
CALD1-223	ENST00000496024	ECM29	Q5VYK3	1845 aa		12.02	□□□□□ -0.48
CALD1-223	ENST00000496024	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.02	□□□□□ -0.48
CALD1-223	ENST00000496024	ZAP70	P43403	619 aa		12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	CACNB3	P54284	484 aa		12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	RAI14	Q9P0K7	980 aa		12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	LRP2BP	Q9P2M1	347 aa		12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	ZNF70	Q9UC06	446 aa	Predicted RBP	12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	MKRN1	Q9UHC7	482 aa	Known RBP	12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	PDS5A	Q29RF7	1337 aa	Known RBP	12.02	□□□□□ -0.49
CALD1-223	ENST00000496024	TCP10L2	B9ZVM9	353 aa		12.01	□□□□□ -0.49
CALD1-223	ENST00000496024	HDLBP	Q00341	1268 aa	Known RBP	12.01	□□□□□ -0.49
CALD1-223	ENST00000496024	SPDYE2	Q495Y8	402 aa		12.01	□□□□□ -0.49
CALD1-223	ENST00000496024	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.01	□□□□□ -0.49
CALD1-223	ENST00000496024	ZDHHC15	Q96MV8	337 aa		12.01	□□□□□ -0.49
CALD1-223	ENST00000496024	DAGLA	Q9Y4D2	1042 aa		12.01	□□□□□ -0.49
CALD1-223	ENST00000496024	ZBTB22	O15209	634 aa		12	□□□□□ -0.49
CALD1-223	ENST00000496024	CYP2E1	P05181	493 aa	Predicted RBP	12	□□□□□ -0.49
CALD1-223	ENST00000496024	MECOM	Q03112	1051 aa		12	□□□□□ -0.49
CALD1-223	ENST00000496024	GRM1	Q13255	1194 aa		12	□□□□□ -0.49
CALD1-223	ENST00000496024	PRKG1	Q13976	671 aa		12	□□□□□ -0.49
CALD1-223	ENST00000496024	APOBEC3H	Q6NTF7	200 aa	Known RBP	12	□□□□□ -0.49
CALD1-223	ENST00000496024	HHIPL2	Q6UWX4	724 aa		12	□□□□□ -0.49
CALD1-223	ENST00000496024	ZNF512B	Q96KM6	892 aa	Predicted RBP	12	□□□□□ -0.49
CALD1-223	ENST00000496024	MRI	Q9BWK5	157 aa		12	□□□□□ -0.49
CALD1-223	ENST00000496024	DEFB129	Q9H1M3	183 aa		12	□□□□□ -0.49
CALD1-223	ENST00000496024	AAMP	Q13685	434 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	TTLL12	Q14166	644 aa	Predicted RBP	11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	RASA3	Q14644	834 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	ANKRD45	Q5TZF3	282 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	MOB2	Q70IA6	237 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	C2orf69	Q8N8R5	385 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	ZNF384	Q8TF68	577 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	DNAJC2	Q99543	621 aa	Known RBP	11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	BOLA2	Q9H3K6	86 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	GBA2	Q9HCG7	927 aa	Predicted RBP	11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	PIH1D3	Q9NQM4	214 aa	Known RBP	11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	USP40	Q9NVE5	1235 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	TMOD2	Q9NZR1	351 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	AK9	Q5TCS8	1911 aa		11.99	□□□□□ -0.49
CALD1-223	ENST00000496024	IDH1	O75874	414 aa	Known RBP	11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	NF2	P35240	595 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	BTD	P43251	543 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	HUNK	P57058	714 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	HDAC1	Q13547	482 aa	Predicted RBP	11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	DEFB115	Q30KQ5	88 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	TSHZ3	Q63HK5	1081 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	NAA16	Q6N069	864 aa	Predicted RBP	11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	CDC42EP5	Q6NZY7	148 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	SLF2	Q8IX21	1173 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	DNAJC5G	Q8N7S2	189 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	NSUN4	Q96CB9	384 aa	Known RBP	11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	RWDD1	Q9H446	243 aa	Predicted RBP	11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	ANTXR1	Q9H6X2	564 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	FZD1	Q9UP38	647 aa		11.98	□□□□□ -0.49
CALD1-223	ENST00000496024	MROH7-TTC4	A0A0A0MT08	1334 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	GOLIM4	O00461	696 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms