RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 OTUD7AQ8TE49 926 aaPredicted RBP10.4□□□□□ -0.74
EPHA4-213ENST00000495693 HPS1Q92902 700 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 COPRSQ9NQ92 184 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 AAASQ9NRG9 546 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 DIAPH3Q9NSV4 1193 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 ATG3Q9NT62 314 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 CWC25Q9NXE8 425 aaPredicted RBP10.4□□□□□ -0.74
EPHA4-213ENST00000495693 GLI3P10071 1580 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 SHANK3Q9BYB0 1731 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 IGKV5-2P06315 115 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
EPHA4-213ENST00000495693 DEKP35659 375 aaKnown RBP10.39□□□□□ -0.75
EPHA4-213ENST00000495693 MCM6Q14566 821 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 SKOR2Q2VWA4 1001 aaPredicted RBP10.39□□□□□ -0.75
EPHA4-213ENST00000495693 LRRFIP1Q32MZ4 808 aaKnown RBP10.39□□□□□ -0.75
EPHA4-213ENST00000495693 KIF6Q6ZMV9 814 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 LRP10Q7Z4F1 713 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 ADAM32Q8TC27 787 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 PI4K2BQ8TCG2 481 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 SUCLG2Q96I99 432 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 KIF2CQ99661 725 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 BICC1Q9H694 974 aaKnown RBP10.39□□□□□ -0.75
EPHA4-213ENST00000495693 PRM3Q9NNZ6 103 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 IL1RAPL2Q9NP60 686 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 ANO2Q9NQ90 1003 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 ISY1Q9ULR0 285 aaKnown RBP10.39□□□□□ -0.75
EPHA4-213ENST00000495693 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 AFDNP55196 1824 aaKnown RBP10.39□□□□□ -0.75
EPHA4-213ENST00000495693 DISP2A7MBM2 1401 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 AK9Q5TCS8 1911 aa10.39□□□□□ -0.75
EPHA4-213ENST00000495693 ZBBXA8MT70 800 aa10.38□□□□□ -0.75
EPHA4-213ENST00000495693 HSP90B1P14625 803 aaKnown RBP10.38□□□□□ -0.75
EPHA4-213ENST00000495693 DDX54Q8TDD1 881 aaKnown RBP10.38□□□□□ -0.75
EPHA4-213ENST00000495693 GPR108Q9NPR9 543 aa10.38□□□□□ -0.75
EPHA4-213ENST00000495693 BTG4Q9NY30 223 aa10.38□□□□□ -0.75
EPHA4-213ENST00000495693 A0A087WZG4 1122 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 EXOC5O00471 708 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 AXIN1O15169 862 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 TRIM28Q13263 835 aaKnown RBP10.37□□□□□ -0.75
EPHA4-213ENST00000495693 NNTQ13423 1086 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 AACSQ86V21 672 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 SLC10A4Q96EP9 437 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 BCL11AQ9H165 835 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 WNK3Q9BYP7 1800 aa10.37□□□□□ -0.75
EPHA4-213ENST00000495693 NUP188Q5SRE5 1749 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 H7C1W4 665 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 SGSM2O43147 1006 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 TOM1O60784 492 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 FRAT2O75474 233 aaPredicted RBP10.36□□□□□ -0.75
EPHA4-213ENST00000495693 MCM4P33991 863 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 HSPA4P34932 840 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 DDIT3P35638 169 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 RAB3GAP1Q15042 981 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 RNF20Q5VTR2 975 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 VASH1Q7L8A9 365 aaPredicted RBP10.36□□□□□ -0.75
EPHA4-213ENST00000495693 INTS4Q96HW7 963 aaKnown RBP10.36□□□□□ -0.75
EPHA4-213ENST00000495693 NWD2Q9ULI1 1742 aa10.36□□□□□ -0.75
EPHA4-213ENST00000495693 CIAO1O76071 339 aa10.35□□□□□ -0.75
EPHA4-213ENST00000495693 FBXO45P0C2W1 286 aa10.35□□□□□ -0.75
EPHA4-213ENST00000495693 ZKSCAN1P17029 563 aaPredicted RBP10.35□□□□□ -0.75
EPHA4-213ENST00000495693 IL15P40933 162 aaPredicted RBP10.35□□□□□ -0.75
EPHA4-213ENST00000495693 ARID5BQ14865 1188 aa10.35□□□□□ -0.75
EPHA4-213ENST00000495693 L1TD1Q5T7N2 865 aaKnown RBP10.35□□□□□ -0.75
EPHA4-213ENST00000495693 CLEC17AQ6ZS10 378 aa10.35□□□□□ -0.75
EPHA4-213ENST00000495693 UBE3BQ7Z3V4 1068 aa10.35□□□□□ -0.75
EPHA4-213ENST00000495693 KLF16Q9BXK1 252 aaPredicted RBP10.35□□□□□ -0.75
EPHA4-213ENST00000495693 BCL9O00512 1426 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 LTBP4Q8N2S1 1624 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 PHLPP1O60346 1717 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 TOGARAM1Q9Y4F4 1720 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 ST8SIA5O15466 376 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 PSMA5P28066 241 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 MCCD1P59942 119 aaPredicted RBP10.34□□□□□ -0.75
EPHA4-213ENST00000495693 NR1H3Q13133 447 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 KAZALD1Q96I82 304 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 HMG20BQ9P0W2 317 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 AKAP2Q9Y2D5 859 aa10.34□□□□□ -0.75
EPHA4-213ENST00000495693 CDHR2Q9BYE9 1310 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
EPHA4-213ENST00000495693 ERVV-1B6SEH8 477 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 ATP5JP18859 108 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 NEK4P51957 841 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 TCIRG1Q13488 830 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 NBPF20Q3BBV1 942 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.33□□□□□ -0.76
EPHA4-213ENST00000495693 CHMP4CQ96CF2 233 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 TM6SF1Q9BZW5 370 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 TBC1D2BQ9UPU7 963 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 SPEF2Q9C093 1822 aa10.33□□□□□ -0.76
EPHA4-213ENST00000495693 CICQ96RK0 1608 aaPredicted RBP10.33□□□□□ -0.76
EPHA4-213ENST00000495693 ABCC12Q96J65 1359 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 PTCD1O75127 700 aaKnown RBP10.32□□□□□ -0.76
EPHA4-213ENST00000495693 SASH1O94885 1247 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 PCCAP05165 728 aaPredicted RBP10.32□□□□□ -0.76
EPHA4-213ENST00000495693 NR3C2P08235 984 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 FSHRP23945 695 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 CASP7P55210 303 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms