RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
COL1A1-209ENST00000495677 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
COL1A1-209ENST00000495677 TDRD3Q9H7E2 651 aaKnown RBP17.14■□□□□ 0.33
COL1A1-209ENST00000495677 SPDYE5A6NIY4 337 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-209ENST00000495677 VGLL4Q14135 290 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 UBE4AQ14139 1066 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 KIF22Q14807 665 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 MFSD14BQ5SR56 506 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
COL1A1-209ENST00000495677 CSADQ9Y600 493 aa17.13■□□□□ 0.33
COL1A1-209ENST00000495677 CETPP11597 493 aa17.12■□□□□ 0.33
COL1A1-209ENST00000495677 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
COL1A1-209ENST00000495677 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
COL1A1-209ENST00000495677 AK9Q5TCS8 1911 aa17.11■□□□□ 0.33
COL1A1-209ENST00000495677 LDHAL6AQ6ZMR3 332 aa17.11■□□□□ 0.33
COL1A1-209ENST00000495677 NKX2-3Q8TAU0 364 aa17.11■□□□□ 0.33
COL1A1-209ENST00000495677 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
COL1A1-209ENST00000495677 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
COL1A1-209ENST00000495677 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
COL1A1-209ENST00000495677 CRKP46108 304 aa17.1■□□□□ 0.33
COL1A1-209ENST00000495677 FKBP5Q13451 457 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-209ENST00000495677 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
COL1A1-209ENST00000495677 C17orf99Q6UX52 265 aa17.1■□□□□ 0.33
COL1A1-209ENST00000495677 CDAN1Q8IWY9 1227 aa17.1■□□□□ 0.33
COL1A1-209ENST00000495677 SH3TC2Q8TF17 1288 aa17.1■□□□□ 0.33
COL1A1-209ENST00000495677 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
COL1A1-209ENST00000495677 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
COL1A1-209ENST00000495677 JAG2Q9Y219 1238 aa17.1■□□□□ 0.33
COL1A1-209ENST00000495677 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 BTBD19C9JJ37 291 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 HIBADHP31937 336 aaKnown RBP17.09■□□□□ 0.33
COL1A1-209ENST00000495677 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
COL1A1-209ENST00000495677 FKBP1CQ5VVH2 108 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 LMBR1LQ6UX01 489 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 FAM83AQ86UY5 434 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 ARHGAP39Q9C0H5 1083 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 PRO3102Q9H379 93 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 SNCAIPQ9Y6H5 919 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 IL16Q14005 1332 aa17.09■□□□□ 0.33
COL1A1-209ENST00000495677 SNAPC2Q13487 334 aa17.08■□□□□ 0.32
COL1A1-209ENST00000495677 BEND3Q5T5X7 828 aa17.08■□□□□ 0.32
COL1A1-209ENST00000495677 CHRDL2Q6WN34 429 aa17.08■□□□□ 0.32
COL1A1-209ENST00000495677 SHISA4Q96DD7 197 aa17.08■□□□□ 0.32
COL1A1-209ENST00000495677 HOOK2Q96ED9 719 aa17.08■□□□□ 0.32
COL1A1-209ENST00000495677 CNNM1Q9NRU3 951 aa17.08■□□□□ 0.32
COL1A1-209ENST00000495677 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
COL1A1-209ENST00000495677 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.32
COL1A1-209ENST00000495677 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.32
COL1A1-209ENST00000495677 IRF6O14896 467 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 PLIN1O60240 522 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 CAPN2P17655 700 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 HOXD10P28358 340 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 GJA8P48165 433 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 PPIL2Q13356 520 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
COL1A1-209ENST00000495677 SRRDQ9UH36 339 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 CHMP3Q9Y3E7 222 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 DOCK3Q8IZD9 2030 aa17.07■□□□□ 0.32
COL1A1-209ENST00000495677 GJB1P08034 283 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 GYG1P46976 350 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 PPATQ06203 517 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 MTFR1Q15390 333 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 FBXO33Q7Z6M2 555 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 DPF3Q92784 378 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 HTATIP2Q9BUP3 242 aa17.06■□□□□ 0.32
COL1A1-209ENST00000495677 VAMP4O75379 141 aa17.05■□□□□ 0.32
COL1A1-209ENST00000495677 MYCP01106 439 aaPredicted RBP17.05■□□□□ 0.32
COL1A1-209ENST00000495677 CTGFP29279 349 aa17.05■□□□□ 0.32
COL1A1-209ENST00000495677 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
COL1A1-209ENST00000495677 ANKRD23Q86SG2 305 aa17.05■□□□□ 0.32
COL1A1-209ENST00000495677 ZDHHC15Q96MV8 337 aa17.05■□□□□ 0.32
COL1A1-209ENST00000495677 RPAP1Q9BWH6 1393 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-209ENST00000495677 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 GRM8O00222 908 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 GRK4P32298 578 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 PSMC4P43686 418 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 DCAF15Q66K64 600 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 ZKSCAN4Q969J2 545 aaPredicted RBP17.04■□□□□ 0.32
COL1A1-209ENST00000495677 WRNIP1Q96S55 665 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 RIPOR2Q9Y4F9 1068 aa17.04■□□□□ 0.32
COL1A1-209ENST00000495677 ADGRA2Q96PE1 1338 aa17.03■□□□□ 0.32
COL1A1-209ENST00000495677 OSBPP22059 807 aa17.03■□□□□ 0.32
COL1A1-209ENST00000495677 GRIK5Q16478 980 aa17.03■□□□□ 0.32
COL1A1-209ENST00000495677 TEKT1Q969V4 418 aa17.03■□□□□ 0.32
COL1A1-209ENST00000495677 TRIM47Q96LD4 638 aa17.03■□□□□ 0.32
COL1A1-209ENST00000495677 KCNH4Q9UQ05 1017 aa17.03■□□□□ 0.32
COL1A1-209ENST00000495677 NR2E3Q9Y5X4 410 aa17.03■□□□□ 0.32
COL1A1-209ENST00000495677 MROH5Q6ZUA9 1318 aa17.02■□□□□ 0.32
COL1A1-209ENST00000495677 PTPRFP10586 1907 aa17.02■□□□□ 0.32
COL1A1-209ENST00000495677 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.32
COL1A1-209ENST00000495677 RAET1EQ8TD07 263 aa17.02■□□□□ 0.32
COL1A1-209ENST00000495677 ZNF112Q9UJU3 913 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms