RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 ATP2B3Q16720 1220 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 SUPT20HL1Q3ZLR7 823 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 SPRYD7Q5W111 196 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 MTMR14Q8NCE2 650 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 ZNF296Q8WUU4 475 aaPredicted RBP13.36□□□□□ -0.27
RFTN1-211ENST00000495666 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 TEKT1Q969V4 418 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 WNK4Q96J92 1243 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 API5Q9BZZ5 524 aaKnown RBP13.36□□□□□ -0.27
RFTN1-211ENST00000495666 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 SERPINA10Q9UK55 444 aa13.36□□□□□ -0.27
RFTN1-211ENST00000495666 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
RFTN1-211ENST00000495666 RFX5P48382 616 aaPredicted RBP13.35□□□□□ -0.27
RFTN1-211ENST00000495666 RARSP54136 660 aaKnown RBP13.35□□□□□ -0.27
RFTN1-211ENST00000495666 HNRNPUQ00839 825 aaKnown RBP eCLIP13.35□□□□□ -0.27
RFTN1-211ENST00000495666 TNFAIP1Q13829 316 aa13.35□□□□□ -0.27
RFTN1-211ENST00000495666 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
RFTN1-211ENST00000495666 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
RFTN1-211ENST00000495666 TMOD2Q9NZR1 351 aa13.35□□□□□ -0.27
RFTN1-211ENST00000495666 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
RFTN1-211ENST00000495666 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
RFTN1-211ENST00000495666 BCAR3O75815 825 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 ADORA1P30542 326 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 TNNI2P48788 182 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 MMP14P50281 582 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 DIXDC1Q155Q3 683 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 LDLRAD1Q5T700 205 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 ATG9AQ7Z3C6 839 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 CEP126Q9P2H0 1117 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
RFTN1-211ENST00000495666 GPR25O00155 361 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 GJA5P36382 358 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 PHKA1P46020 1223 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 MLLT1Q03111 559 aaPredicted RBP13.33□□□□□ -0.28
RFTN1-211ENST00000495666 TCP10Q12799 353 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 TRMT2AQ8IZ69 625 aaKnown RBP13.33□□□□□ -0.28
RFTN1-211ENST00000495666 MIER1Q8N108 512 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 TBC1D22AQ8WUA7 517 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 LPIN2Q92539 896 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 OPTNQ96CV9 577 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
RFTN1-211ENST00000495666 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
RFTN1-211ENST00000495666 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
RFTN1-211ENST00000495666 FGFR2P21802 821 aa13.32□□□□□ -0.28
RFTN1-211ENST00000495666 PRDX5P30044 214 aa13.32□□□□□ -0.28
RFTN1-211ENST00000495666 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
RFTN1-211ENST00000495666 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
RFTN1-211ENST00000495666 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
RFTN1-211ENST00000495666 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
RFTN1-211ENST00000495666 MYH2Q9UKX2 1941 aa13.32□□□□□ -0.28
RFTN1-211ENST00000495666 MANSC4A6NHS7 340 aaPredicted RBP13.31□□□□□ -0.28
RFTN1-211ENST00000495666 FKTNO75072 461 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 TM4SF4P48230 202 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 VGLL4Q14135 290 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 MIGA2Q7L4E1 593 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 NEUROD6Q96NK8 337 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 WRNIP1Q96S55 665 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 ABCF2Q9UG63 623 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 CSADQ9Y600 493 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 MAST3O60307 1309 aa13.31□□□□□ -0.28
RFTN1-211ENST00000495666 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
RFTN1-211ENST00000495666 TRIM27P14373 513 aa13.3□□□□□ -0.28
RFTN1-211ENST00000495666 TIMM10P62072 90 aa13.3□□□□□ -0.28
RFTN1-211ENST00000495666 TFCP2Q12800 502 aa13.3□□□□□ -0.28
RFTN1-211ENST00000495666 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
RFTN1-211ENST00000495666 ZKSCAN4Q969J2 545 aaPredicted RBP13.3□□□□□ -0.28
RFTN1-211ENST00000495666 TEPSINQ96N21 525 aa13.3□□□□□ -0.28
RFTN1-211ENST00000495666 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
RFTN1-211ENST00000495666 GNL3LQ9NVN8 582 aaKnown RBP13.3□□□□□ -0.28
RFTN1-211ENST00000495666 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
RFTN1-211ENST00000495666 ZBTB48P10074 688 aaPredicted RBP13.29□□□□□ -0.28
RFTN1-211ENST00000495666 IL15P40933 162 aaPredicted RBP13.29□□□□□ -0.28
RFTN1-211ENST00000495666 CRHR2Q13324 411 aa13.29□□□□□ -0.28
RFTN1-211ENST00000495666 MAPK8IP2Q13387 824 aaPredicted RBP13.29□□□□□ -0.28
RFTN1-211ENST00000495666 APOBEC3HQ6NTF7 200 aaKnown RBP13.29□□□□□ -0.28
RFTN1-211ENST00000495666 WDR66Q8TBY9 1149 aa13.29□□□□□ -0.28
RFTN1-211ENST00000495666 CD99L2Q8TCZ2 262 aa13.29□□□□□ -0.28
RFTN1-211ENST00000495666 DAGLAQ9Y4D2 1042 aa13.29□□□□□ -0.28
RFTN1-211ENST00000495666 TRIM17Q9Y577 477 aa13.29□□□□□ -0.28
RFTN1-211ENST00000495666 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
RFTN1-211ENST00000495666 DOCK2Q92608 1830 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 CCL15-CCL14A0A0B4J2E2 113 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 MYCP01106 439 aaPredicted RBP13.28□□□□□ -0.28
RFTN1-211ENST00000495666 GNAI3P08754 354 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 NFIAQ12857 509 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 PICALMQ13492 652 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 MAP3K11Q16584 847 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 CCL15Q16663 113 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 GORABQ5T7V8 394 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.28□□□□□ -0.28
RFTN1-211ENST00000495666 DZIP1Q86YF9 867 aaKnown RBP13.28□□□□□ -0.28
RFTN1-211ENST00000495666 TMEM57Q8N5G2 664 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
RFTN1-211ENST00000495666 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.28□□□□□ -0.28
RFTN1-211ENST00000495666 A0A1B0GUL7 405 aa13.27□□□□□ -0.29
RFTN1-211ENST00000495666 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
RFTN1-211ENST00000495666 CIAO1O76071 339 aa13.27□□□□□ -0.29
RFTN1-211ENST00000495666 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms