RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 HTTP42858 3142 aa22.19■■□□□ 1.14
TMEM53-209ENST00000495630 TCP10L2B9ZVM9 353 aa22.18■■□□□ 1.14
TMEM53-209ENST00000495630 EN2P19622 333 aaPredicted RBP22.18■■□□□ 1.14
TMEM53-209ENST00000495630 HDLBPQ00341 1268 aaKnown RBP22.18■■□□□ 1.14
TMEM53-209ENST00000495630 HABP4Q5JVS0 413 aaKnown RBP22.18■■□□□ 1.14
TMEM53-209ENST00000495630 FBXO33Q7Z6M2 555 aa22.18■■□□□ 1.14
TMEM53-209ENST00000495630 BRI3BPQ8WY22 251 aa22.18■■□□□ 1.14
TMEM53-209ENST00000495630 PUS3Q9BZE2 481 aaKnown RBP22.18■■□□□ 1.14
TMEM53-209ENST00000495630 SRCIN1Q9C0H9 1055 aa22.18■■□□□ 1.14
TMEM53-209ENST00000495630 CSADQ9Y600 493 aa22.18■■□□□ 1.14
TMEM53-209ENST00000495630 ECM29Q5VYK3 1845 aa22.17■■□□□ 1.14
TMEM53-209ENST00000495630 MROH5Q6ZUA9 1318 aa22.17■■□□□ 1.14
TMEM53-209ENST00000495630 CAP1Q01518 475 aa22.17■■□□□ 1.14
TMEM53-209ENST00000495630 VGLL4Q14135 290 aa22.17■■□□□ 1.14
TMEM53-209ENST00000495630 NBPF11Q86T75 865 aa22.17■■□□□ 1.14
TMEM53-209ENST00000495630 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.17■■□□□ 1.14
TMEM53-209ENST00000495630 MRIQ9BWK5 157 aa22.17■■□□□ 1.14
TMEM53-209ENST00000495630 TMEM39BQ9GZU3 492 aa22.17■■□□□ 1.14
TMEM53-209ENST00000495630 CCL15-CCL14A0A0B4J2E2 113 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 TAF1CQ15572 869 aaPredicted RBP22.16■■□□□ 1.14
TMEM53-209ENST00000495630 CCL15Q16663 113 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 VPS37DQ86XT2 251 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 CDAN1Q8IWY9 1227 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 TBC1D22AQ8WUA7 517 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 CNKSR2Q8WXI2 1034 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 MRS2Q9HD23 443 aa22.16■■□□□ 1.14
TMEM53-209ENST00000495630 MKI67P46013 3256 aaKnown RBP22.16■■□□□ 1.14
TMEM53-209ENST00000495630 WDHD1O75717 1129 aaPredicted RBP22.15■■□□□ 1.14
TMEM53-209ENST00000495630 KAZALD1Q96I82 304 aa22.15■■□□□ 1.14
TMEM53-209ENST00000495630 SUCLG2Q96I99 432 aa22.15■■□□□ 1.14
TMEM53-209ENST00000495630 ZNF333Q96JL9 665 aa22.15■■□□□ 1.14
TMEM53-209ENST00000495630 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
TMEM53-209ENST00000495630 KIAA0100Q14667 2235 aaKnown RBP22.15■■□□□ 1.14
TMEM53-209ENST00000495630 LAMB1P07942 1786 aa22.15■■□□□ 1.14
TMEM53-209ENST00000495630 CAVIN4Q5BKX8 364 aa22.14■■□□□ 1.13
TMEM53-209ENST00000495630 OTUD5Q96G74 571 aa22.14■■□□□ 1.13
TMEM53-209ENST00000495630 UTYO14607 1347 aa22.13■■□□□ 1.13
TMEM53-209ENST00000495630 SPDYE5A6NIY4 337 aa22.13■■□□□ 1.13
TMEM53-209ENST00000495630 GRIK5Q16478 980 aa22.13■■□□□ 1.13
TMEM53-209ENST00000495630 SLC9C1Q4G0N8 1177 aa22.13■■□□□ 1.13
TMEM53-209ENST00000495630 FAM43AQ8N2R8 423 aa22.13■■□□□ 1.13
TMEM53-209ENST00000495630 HOOK2Q96ED9 719 aa22.13■■□□□ 1.13
TMEM53-209ENST00000495630 ZCCHC17Q9NP64 241 aaKnown RBP22.13■■□□□ 1.13
TMEM53-209ENST00000495630 FRAT2O75474 233 aaPredicted RBP22.12■■□□□ 1.13
TMEM53-209ENST00000495630 NBPF7P0C2Y1 421 aaPredicted RBP22.12■■□□□ 1.13
TMEM53-209ENST00000495630 CETPP11597 493 aa22.12■■□□□ 1.13
TMEM53-209ENST00000495630 FKBP1CQ5VVH2 108 aa22.12■■□□□ 1.13
TMEM53-209ENST00000495630 ERO1BQ86YB8 467 aa22.12■■□□□ 1.13
TMEM53-209ENST00000495630 TEKT1Q969V4 418 aa22.12■■□□□ 1.13
TMEM53-209ENST00000495630 ZDHHC15Q96MV8 337 aa22.12■■□□□ 1.13
TMEM53-209ENST00000495630 CENPFP49454 3210 aa22.12■■□□□ 1.13
TMEM53-209ENST00000495630 TLR2O60603 784 aa22.11■■□□□ 1.13
TMEM53-209ENST00000495630 RABL6Q3YEC7 729 aaPredicted RBP22.11■■□□□ 1.13
TMEM53-209ENST00000495630 FAM83AQ86UY5 434 aa22.11■■□□□ 1.13
TMEM53-209ENST00000495630 IQSEC3Q9UPP2 1182 aaPredicted RBP22.11■■□□□ 1.13
TMEM53-209ENST00000495630 SUGT1Q9Y2Z0 365 aa22.11■■□□□ 1.13
TMEM53-209ENST00000495630 PTCH2Q9Y6C5 1203 aa22.11■■□□□ 1.13
TMEM53-209ENST00000495630 A0A1B0GUL6 1792 aa22.1■■□□□ 1.13
TMEM53-209ENST00000495630 PDE8BO95263 885 aa22.1■■□□□ 1.13
TMEM53-209ENST00000495630 CHAF1AQ13111 956 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-209ENST00000495630 METTL24Q5JXM2 366 aa22.1■■□□□ 1.13
TMEM53-209ENST00000495630 TMOD2Q9NZR1 351 aa22.1■■□□□ 1.13
TMEM53-209ENST00000495630 GNRH1P01148 92 aa22.09■■□□□ 1.13
TMEM53-209ENST00000495630 SNAPC2Q13487 334 aa22.09■■□□□ 1.13
TMEM53-209ENST00000495630 KIF22Q14807 665 aa22.09■■□□□ 1.13
TMEM53-209ENST00000495630 SLC4A8Q2Y0W8 1093 aa22.09■■□□□ 1.13
TMEM53-209ENST00000495630 LRRC24Q50LG9 513 aa22.09■■□□□ 1.13
TMEM53-209ENST00000495630 BICC1Q9H694 974 aaKnown RBP22.09■■□□□ 1.13
TMEM53-209ENST00000495630 SNCAIPQ9Y6H5 919 aa22.09■■□□□ 1.13
TMEM53-209ENST00000495630 CACNB3P54284 484 aa22.08■■□□□ 1.13
TMEM53-209ENST00000495630 APOBEC3HQ6NTF7 200 aaKnown RBP22.08■■□□□ 1.13
TMEM53-209ENST00000495630 VGLL2Q8N8G2 317 aa22.08■■□□□ 1.13
TMEM53-209ENST00000495630 WRNIP1Q96S55 665 aa22.08■■□□□ 1.13
TMEM53-209ENST00000495630 BTBD19C9JJ37 291 aa22.07■■□□□ 1.12
TMEM53-209ENST00000495630 IRF6O14896 467 aa22.07■■□□□ 1.12
TMEM53-209ENST00000495630 BCAMP50895 628 aa22.07■■□□□ 1.12
TMEM53-209ENST00000495630 PRMT2P55345 433 aa22.07■■□□□ 1.12
TMEM53-209ENST00000495630 HHIPL2Q6UWX4 724 aa22.07■■□□□ 1.12
TMEM53-209ENST00000495630 ZKSCAN4Q969J2 545 aaPredicted RBP22.07■■□□□ 1.12
TMEM53-209ENST00000495630 MAST3O60307 1309 aa22.06■■□□□ 1.12
TMEM53-209ENST00000495630 LACTBP83111 547 aaPredicted RBP22.06■■□□□ 1.12
TMEM53-209ENST00000495630 PPIL2Q13356 520 aa22.06■■□□□ 1.12
TMEM53-209ENST00000495630 DCAF15Q66K64 600 aa22.06■■□□□ 1.12
TMEM53-209ENST00000495630 RBBP6Q7Z6E9 1792 aaKnown RBP22.05■■□□□ 1.12
TMEM53-209ENST00000495630 ANP32CO43423 234 aa22.05■■□□□ 1.12
TMEM53-209ENST00000495630 IFIT1P09914 478 aaKnown RBP22.05■■□□□ 1.12
TMEM53-209ENST00000495630 PPATQ06203 517 aa22.05■■□□□ 1.12
TMEM53-209ENST00000495630 ANKRD44Q8N8A2 993 aa22.05■■□□□ 1.12
TMEM53-209ENST00000495630 KIF16BQ96L93 1317 aa22.05■■□□□ 1.12
TMEM53-209ENST00000495630 ZNF341Q9BYN7 854 aa22.04■■□□□ 1.12
TMEM53-209ENST00000495630 FGFR2P21802 821 aa22.03■■□□□ 1.12
TMEM53-209ENST00000495630 PUM3Q15397 648 aaKnown RBP22.03■■□□□ 1.12
TMEM53-209ENST00000495630 C17orf99Q6UX52 265 aa22.03■■□□□ 1.12
TMEM53-209ENST00000495630 SH3TC2Q8TF17 1288 aa22.03■■□□□ 1.12
TMEM53-209ENST00000495630 ARHGAP39Q9C0H5 1083 aa22.03■■□□□ 1.12
TMEM53-209ENST00000495630 OTOFQ9HC10 1997 aa22.03■■□□□ 1.12
TMEM53-209ENST00000495630 BRCA2P51587 3418 aa22.02■■□□□ 1.12
TMEM53-209ENST00000495630 FXR1P51114 621 aaKnown RBP eCLIP22.02■■□□□ 1.12
TMEM53-209ENST00000495630 MIGA2Q7L4E1 593 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms