RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SHTN1A0MZ66 631 aa20.82■□□□□ 0.92
HDAC6-235ENST00000495515 PRDX5P30044 214 aa20.82■□□□□ 0.92
HDAC6-235ENST00000495515 DLGAP5Q15398 846 aa20.82■□□□□ 0.92
HDAC6-235ENST00000495515 DZIP1Q86YF9 867 aaKnown RBP20.82■□□□□ 0.92
HDAC6-235ENST00000495515 GLRX3O76003 335 aaKnown RBP20.81■□□□□ 0.92
HDAC6-235ENST00000495515 CYP2E1P05181 493 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-235ENST00000495515 RBM5P52756 815 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDAC6-235ENST00000495515 LDHDQ86WU2 507 aa20.81■□□□□ 0.92
HDAC6-235ENST00000495515 ZC3H15Q8WU90 426 aaKnown RBP20.81■□□□□ 0.92
HDAC6-235ENST00000495515 TEKT1Q969V4 418 aa20.81■□□□□ 0.92
HDAC6-235ENST00000495515 DNAJC2Q99543 621 aaKnown RBP20.81■□□□□ 0.92
HDAC6-235ENST00000495515 HAUS7Q99871 368 aa20.81■□□□□ 0.92
HDAC6-235ENST00000495515 RAI14Q9P0K7 980 aa20.81■□□□□ 0.92
HDAC6-235ENST00000495515 CLEC11AQ9Y240 323 aa20.81■□□□□ 0.92
HDAC6-235ENST00000495515 GSTO1P78417 241 aa20.8■□□□□ 0.92
HDAC6-235ENST00000495515 GRIK5Q16478 980 aa20.8■□□□□ 0.92
HDAC6-235ENST00000495515 CFAP100Q494V2 611 aa20.8■□□□□ 0.92
HDAC6-235ENST00000495515 TBC1D9Q6ZT07 1266 aa20.8■□□□□ 0.92
HDAC6-235ENST00000495515 MTMR14Q8NCE2 650 aa20.8■□□□□ 0.92
HDAC6-235ENST00000495515 TRPM4Q8TD43 1214 aa20.8■□□□□ 0.92
HDAC6-235ENST00000495515 OTUD7AQ8TE49 926 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-235ENST00000495515 STAP2Q9UGK3 403 aa20.8■□□□□ 0.92
HDAC6-235ENST00000495515 MYO1BO43795 1136 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 TOMM70O94826 608 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 LDHCP07864 332 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 HSPA6P17066 643 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 CRKP46108 304 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 PDE1AP54750 535 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 TMED8Q6PL24 325 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-235ENST00000495515 HHIPL2Q6UWX4 724 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 PAG1Q9NWQ8 432 aa20.79■□□□□ 0.92
HDAC6-235ENST00000495515 SALL3Q9BXA9 1300 aa20.78■□□□□ 0.92
HDAC6-235ENST00000495515 MYH13Q9UKX3 1938 aa20.78■□□□□ 0.92
HDAC6-235ENST00000495515 GOLIM4O00461 696 aa20.78■□□□□ 0.92
HDAC6-235ENST00000495515 MAP3K12Q12852 859 aa20.78■□□□□ 0.92
HDAC6-235ENST00000495515 ZNF646O15015 1829 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-235ENST00000495515 AOX1Q06278 1338 aa20.78■□□□□ 0.92
HDAC6-235ENST00000495515 WNT10BO00744 389 aa20.77■□□□□ 0.92
HDAC6-235ENST00000495515 IDH1O75874 414 aaKnown RBP20.77■□□□□ 0.92
HDAC6-235ENST00000495515 EGFRP00533 1210 aa20.77■□□□□ 0.92
HDAC6-235ENST00000495515 HIRAP54198 1017 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-235ENST00000495515 MECOMQ03112 1051 aa20.77■□□□□ 0.92
HDAC6-235ENST00000495515 TSHZ3Q63HK5 1081 aa20.77■□□□□ 0.92
HDAC6-235ENST00000495515 RBM46Q8TBY0 533 aaKnown RBP20.77■□□□□ 0.92
HDAC6-235ENST00000495515 ZDHHC15Q96MV8 337 aa20.77■□□□□ 0.92
HDAC6-235ENST00000495515 PIH1D3Q9NQM4 214 aaKnown RBP20.77■□□□□ 0.92
HDAC6-235ENST00000495515 NDUFB9Q9Y6M9 179 aa20.77■□□□□ 0.92
HDAC6-235ENST00000495515 SPDYE2BA6NHP3 402 aa20.76■□□□□ 0.91
HDAC6-235ENST00000495515 SPDYE6P0CI01 402 aa20.76■□□□□ 0.91
HDAC6-235ENST00000495515 CHADLQ6NUI6 762 aa20.76■□□□□ 0.91
HDAC6-235ENST00000495515 SMC1BQ8NDV3 1235 aa20.76■□□□□ 0.91
HDAC6-235ENST00000495515 PI4K2BQ8TCG2 481 aa20.76■□□□□ 0.91
HDAC6-235ENST00000495515 DCPSQ96C86 337 aaKnown RBP20.76■□□□□ 0.91
HDAC6-235ENST00000495515 NSUN4Q96CB9 384 aaKnown RBP20.76■□□□□ 0.91
HDAC6-235ENST00000495515 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.76■□□□□ 0.912e-6■■■□□ 16.6
HDAC6-235ENST00000495515 ANTXR1Q9H6X2 564 aa20.76■□□□□ 0.91
HDAC6-235ENST00000495515 DIXDC1Q155Q3 683 aa20.75■□□□□ 0.91
HDAC6-235ENST00000495515 NBPF9Q3BBW0 867 aa20.75■□□□□ 0.91
HDAC6-235ENST00000495515 NAA16Q6N069 864 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-235ENST00000495515 PLEKHM2Q8IWE5 1019 aa20.75■□□□□ 0.91
HDAC6-235ENST00000495515 FAM163AQ96GL9 167 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-235ENST00000495515 ZBED3Q96IU2 234 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-235ENST00000495515 OSBPL3Q9H4L5 887 aa20.75■□□□□ 0.91
HDAC6-235ENST00000495515 PGAP2Q9UHJ9 254 aa20.75■□□□□ 0.91
HDAC6-235ENST00000495515 POTEIP0CG38 1075 aa20.74■□□□□ 0.91
HDAC6-235ENST00000495515 POTEJP0CG39 1038 aa20.74■□□□□ 0.91
HDAC6-235ENST00000495515 LRRFIP1Q32MZ4 808 aaKnown RBP20.74■□□□□ 0.91
HDAC6-235ENST00000495515 ZSCAN25Q6NSZ9 544 aa20.74■□□□□ 0.91
HDAC6-235ENST00000495515 PRMT6Q96LA8 375 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-235ENST00000495515 NOL10Q9BSC4 688 aaKnown RBP20.74■□□□□ 0.91
HDAC6-235ENST00000495515 DAGLAQ9Y4D2 1042 aa20.74■□□□□ 0.91
HDAC6-235ENST00000495515 FSTL1Q12841 308 aa20.73■□□□□ 0.91
HDAC6-235ENST00000495515 GGA3Q9NZ52 723 aa20.73■□□□□ 0.91
HDAC6-235ENST00000495515 TMOD2Q9NZR1 351 aa20.73■□□□□ 0.91
HDAC6-235ENST00000495515 MROH7-TTC4A0A0A0MT08 1334 aa20.73■□□□□ 0.91
HDAC6-235ENST00000495515 GAKO14976 1311 aa20.73■□□□□ 0.91
HDAC6-235ENST00000495515 PITPNM2Q9BZ72 1349 aa20.73■□□□□ 0.91
HDAC6-235ENST00000495515 AKAP11Q9UKA4 1901 aa20.72■□□□□ 0.91
HDAC6-235ENST00000495515 ANGEL2Q5VTE6 544 aaKnown RBP20.72■□□□□ 0.91
HDAC6-235ENST00000495515 APOBEC3HQ6NTF7 200 aaKnown RBP20.72■□□□□ 0.91
HDAC6-235ENST00000495515 CDC37L1Q7L3B6 337 aa20.72■□□□□ 0.91
HDAC6-235ENST00000495515 APOBEC3FQ8IUX4 373 aaKnown RBP20.72■□□□□ 0.91
HDAC6-235ENST00000495515 SULF1Q8IWU6 871 aa20.72■□□□□ 0.91
HDAC6-235ENST00000495515 EDC3Q96F86 508 aaKnown RBP20.72■□□□□ 0.91
HDAC6-235ENST00000495515 BAG3O95817 575 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 CYP7A1P22680 504 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 SLC9C2Q5TAH2 1124 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 MAP1SQ66K74 1059 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-235ENST00000495515 CERS3Q8IU89 383 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 MAGEB6Q8N7X4 407 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 KBTBD3Q8NAB2 608 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 PCDHAC2Q9Y5I4 1007 aa20.71■□□□□ 0.91
HDAC6-235ENST00000495515 GPR75-ASB3A0A0A6YYF3 556 aa20.7■□□□□ 0.9
HDAC6-235ENST00000495515 MAP4K4O95819 1239 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-235ENST00000495515 PDE4AP27815 886 aa20.7■□□□□ 0.9
HDAC6-235ENST00000495515 TNFAIP1Q13829 316 aa20.7■□□□□ 0.9
HDAC6-235ENST00000495515 SPDYE2Q495Y8 402 aa20.7■□□□□ 0.9
HDAC6-235ENST00000495515 KRT26Q7Z3Y9 468 aa20.7■□□□□ 0.9
HDAC6-235ENST00000495515 EVI5LQ96CN4 794 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms