RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CIAO1O76071 339 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 RLBP1P12271 317 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 SLC5A1P13866 664 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 CRKP46108 304 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 ATP2B3Q16720 1220 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 ZKSCAN2Q63HK3 967 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 LPIN2Q92539 896 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 CEP126Q9P2H0 1117 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 ZNF70Q9UC06 446 aaPredicted RBP13.23□□□□□ -0.29
NELFE-213ENST00000494956 AKAP11Q9UKA4 1901 aa13.23□□□□□ -0.29
NELFE-213ENST00000494956 PNMA6EA0A0J9YXQ4 647 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 GNAI3P08754 354 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 PHKA1P46020 1223 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 MMP14P50281 582 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 CACNB3P54284 484 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 NBPF12Q5TAG4 269 aaPredicted RBP13.22□□□□□ -0.29
NELFE-213ENST00000494956 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 DZIP1LQ8IYY4 767 aaKnown RBP13.22□□□□□ -0.29
NELFE-213ENST00000494956 CCDC102AQ96A19 550 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 CSRNP1Q96S65 589 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
NELFE-213ENST00000494956 ANGEL1Q9UNK9 670 aaKnown RBP13.22□□□□□ -0.29
NELFE-213ENST00000494956 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 MYO1BO43795 1136 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 NF2P35240 595 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 TIMM10P62072 90 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 FKBP1BP68106 108 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 TFCP2Q12800 502 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 SERPINA10Q9UK55 444 aa13.21□□□□□ -0.29
NELFE-213ENST00000494956 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
NELFE-213ENST00000494956 TRPA1O75762 1119 aa13.2□□□□□ -0.3
NELFE-213ENST00000494956 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
NELFE-213ENST00000494956 MTX1Q13505 466 aa13.2□□□□□ -0.3
NELFE-213ENST00000494956 RASA3Q14644 834 aa13.2□□□□□ -0.3
NELFE-213ENST00000494956 CLMNQ96JQ2 1002 aa13.2□□□□□ -0.3
NELFE-213ENST00000494956 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
NELFE-213ENST00000494956 GNAI2P04899 355 aa13.19□□□□□ -0.3
NELFE-213ENST00000494956 PRDX5P30044 214 aa13.19□□□□□ -0.3
NELFE-213ENST00000494956 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
NELFE-213ENST00000494956 TBC1D22AQ8WUA7 517 aa13.19□□□□□ -0.3
NELFE-213ENST00000494956 TMEM39BQ9GZU3 492 aa13.19□□□□□ -0.3
NELFE-213ENST00000494956 RNF186Q9NXI6 227 aa13.19□□□□□ -0.3
NELFE-213ENST00000494956 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
NELFE-213ENST00000494956 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
NELFE-213ENST00000494956 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
NELFE-213ENST00000494956 LDLRAD1Q5T700 205 aa13.18□□□□□ -0.3
NELFE-213ENST00000494956 CCDC102BQ68D86 513 aa13.18□□□□□ -0.3
NELFE-213ENST00000494956 ITPRIPQ8IWB1 547 aa13.18□□□□□ -0.3
NELFE-213ENST00000494956 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
NELFE-213ENST00000494956 TEPSINQ96N21 525 aa13.18□□□□□ -0.3
NELFE-213ENST00000494956 USP2O75604 605 aaPredicted RBP13.17□□□□□ -0.3
NELFE-213ENST00000494956 APOBEC3HQ6NTF7 200 aaKnown RBP13.17□□□□□ -0.3
NELFE-213ENST00000494956 FTSJ3Q8IY81 847 aaKnown RBP13.17□□□□□ -0.3
NELFE-213ENST00000494956 WDR66Q8TBY9 1149 aa13.17□□□□□ -0.3
NELFE-213ENST00000494956 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
NELFE-213ENST00000494956 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
NELFE-213ENST00000494956 PPP2R3BQ9Y5P8 575 aa13.17□□□□□ -0.3
NELFE-213ENST00000494956 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
NELFE-213ENST00000494956 CA12O43570 354 aa13.16□□□□□ -0.3
NELFE-213ENST00000494956 HDLBPQ00341 1268 aaKnown RBP13.16□□□□□ -0.3
NELFE-213ENST00000494956 RASGRF1Q13972 1273 aa13.16□□□□□ -0.3
NELFE-213ENST00000494956 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
NELFE-213ENST00000494956 ZDHHC15Q96MV8 337 aa13.16□□□□□ -0.3
NELFE-213ENST00000494956 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
NELFE-213ENST00000494956 DAGLAQ9Y4D2 1042 aa13.16□□□□□ -0.3
NELFE-213ENST00000494956 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
NELFE-213ENST00000494956 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.3
NELFE-213ENST00000494956 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 GJA5P36382 358 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 TNFAIP1Q13829 316 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 POLA2Q14181 598 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 SPRYD7Q5W111 196 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 SLC10A4Q96EP9 437 aa13.15□□□□□ -0.3
NELFE-213ENST00000494956 GNL3LQ9NVN8 582 aaKnown RBP13.15□□□□□ -0.3
NELFE-213ENST00000494956 LDHBP07195 334 aaKnown RBP13.14□□□□□ -0.31
NELFE-213ENST00000494956 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
NELFE-213ENST00000494956 G3BP1Q13283 466 aaKnown RBP eCLIP13.14□□□□□ -0.31
NELFE-213ENST00000494956 HHIPL2Q6UWX4 724 aa13.14□□□□□ -0.31
NELFE-213ENST00000494956 WNK4Q96J92 1243 aa13.14□□□□□ -0.31
NELFE-213ENST00000494956 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
NELFE-213ENST00000494956 DENND2AQ9ULE3 1009 aa13.14□□□□□ -0.31
NELFE-213ENST00000494956 MAST3O60307 1309 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 MYO5AQ9Y4I1 1855 aaKnown RBP13.13□□□□□ -0.31
NELFE-213ENST00000494956 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
NELFE-213ENST00000494956 TCP10Q12799 353 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 NFIAQ12857 509 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 CDC42EP5Q6NZY7 148 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 TBC1D9Q6ZT07 1266 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 ABHD8Q96I13 439 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 MRIQ9BWK5 157 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 ELP3Q9H9T3 547 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 SAGE1Q9NXZ1 904 aa13.13□□□□□ -0.31
NELFE-213ENST00000494956 ABCF2Q9UG63 623 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms