RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 IFT20Q8IY31 132 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 MICAL1Q8TDZ2 1067 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 GPATCH8Q9UKJ3 1502 aaKnown RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 SIGLEC1Q9BZZ2 1709 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 ADCY2Q08462 1091 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 MAP7Q14244 749 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 NUTM2DQ5VT03 806 aaPredicted RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 NUTM2AQ8IVF1 878 aaPredicted RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 ELL2O00472 640 aaPredicted RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 TACC1O75410 805 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 SURF6O75683 361 aaKnown RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 ZRANB2O95218 330 aaKnown RBP eCLIP6.91□□□□□ -1.3
PHC3-214ENST00000494943 XBP1P17861 261 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 IFI16Q16666 785 aaKnown RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 EFCAB2Q5VUJ9 269 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 CCDC102BQ68D86 513 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 CAPRIN2Q6IMN6 1127 aaKnown RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 CPLX4Q7Z7G2 160 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 SPAG5Q96R06 1193 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 XPO4Q9C0E2 1151 aaKnown RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 ZSWIM4Q9H7M6 989 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 IQSEC2Q5JU85 1478 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 PIK3R4Q99570 1358 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 UNC13BO14795 1591 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 CFAP73A6NFT4 308 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 SMIM24O75264 130 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 CCZ1BP86790 482 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 CCZ1P86791 482 aaPredicted RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 PAK2Q13177 524 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 CCDC92Q53HC0 331 aaPredicted RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 CWC27Q6UX04 472 aaKnown RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 MIEF2Q96C03 454 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 SLC24A3Q9HC58 644 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 PLCB1Q9NQ66 1216 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 ST7Q9NRC1 585 aa6.91□□□□□ -1.3
PHC3-214ENST00000494943 IQSEC3Q9UPP2 1182 aaPredicted RBP6.91□□□□□ -1.3
PHC3-214ENST00000494943 TBC1D8O95759 1140 aa6.9□□□□□ -1.3
PHC3-214ENST00000494943 IBSPP21815 317 aaPredicted RBP6.9□□□□□ -1.3
PHC3-214ENST00000494943 NUP88Q99567 741 aaPredicted RBP6.9□□□□□ -1.3
PHC3-214ENST00000494943 SNX14Q9Y5W7 946 aa6.9□□□□□ -1.3
PHC3-214ENST00000494943 CLTCL1P53675 1640 aa6.9□□□□□ -1.3
PHC3-214ENST00000494943 MEFVO15553 781 aaPredicted RBP6.9□□□□□ -1.3
PHC3-214ENST00000494943 ZFYP08048 801 aaPredicted RBP6.9□□□□□ -1.3
PHC3-214ENST00000494943 MAP3K9P80192 1104 aa6.9□□□□□ -1.3
PHC3-214ENST00000494943 GDAP1L1Q96MZ0 367 aa6.9□□□□□ -1.3
PHC3-214ENST00000494943 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.9□□□□□ -1.3
PHC3-214ENST00000494943 A0A1W2PQ27 194 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 A0A1W2PQ64 194 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 A0A1W2PQD8 194 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 NPM1P06748 294 aaKnown RBP eCLIP6.9□□□□□ -1.31
PHC3-214ENST00000494943 PREPLQ4J6C6 727 aaPredicted RBP6.9□□□□□ -1.31
PHC3-214ENST00000494943 SLC30A9Q6PML9 568 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 SDCCAG8Q86SQ7 713 aaPredicted RBP6.9□□□□□ -1.31
PHC3-214ENST00000494943 MFN1Q8IWA4 741 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 PPFIBP2Q8ND30 876 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 LRRC45Q96CN5 670 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 MED14O60244 1454 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 ARHGAP5Q13017 1502 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 CEP104O60308 925 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 PCK1P35558 622 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 SYKP43405 635 aa6.9□□□□□ -1.31
PHC3-214ENST00000494943 ZEB2O60315 1214 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 EPHB4P54760 987 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 KARSQ15046 597 aaKnown RBP6.89□□□□□ -1.31
PHC3-214ENST00000494943 CCDC174Q6PII3 467 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 LRRC31Q6UY01 552 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 CEP128Q6ZU80 1094 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 FUCA2Q9BTY2 467 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 ITGB1BP2Q9UKP3 347 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 SBNO2Q9Y2G9 1366 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 ATP10BO94823 1461 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 LIN7AO14910 233 aaPredicted RBP6.89□□□□□ -1.31
PHC3-214ENST00000494943 SMTNP53814 917 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 C6orf163Q5TEZ5 329 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 GKAP1Q5VSY0 366 aaPredicted RBP6.89□□□□□ -1.31
PHC3-214ENST00000494943 CCDC155Q8N6L0 562 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 MAGEC3Q8TD91 643 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 ABCB6Q9NP58 842 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 NOS1P29475 1434 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 RASSF10A6NK89 507 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 FSBPO95073 299 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 STK3Q13188 491 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 RALYLQ86SE5 291 aaKnown RBP6.89□□□□□ -1.31
PHC3-214ENST00000494943 CCDC65Q8IXS2 484 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 PANX2Q96RD6 677 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 GGA2Q9UJY4 613 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 TTC21AQ8NDW8 1320 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 SRRM3A6NNA2 597 aaPredicted RBP6.89□□□□□ -1.31
PHC3-214ENST00000494943 EIF3HO15372 352 aaKnown RBP eCLIP6.89□□□□□ -1.31
PHC3-214ENST00000494943 TNNC1P63316 161 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 CCDC152Q4G0S7 254 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 MLKLQ8NB16 471 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 DDX12PQ92771 950 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 GFM2Q969S9 779 aaKnown RBP6.89□□□□□ -1.31
PHC3-214ENST00000494943 COG3Q96JB2 828 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 GBP5Q96PP8 586 aa6.89□□□□□ -1.31
PHC3-214ENST00000494943 CDC42BPBQ9Y5S2 1711 aa6.88□□□□□ -1.31
PHC3-214ENST00000494943 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
PHC3-214ENST00000494943 DNAJC8O75937 253 aaPredicted RBP6.88□□□□□ -1.31
PHC3-214ENST00000494943 USP5P45974 858 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms