RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PAXIP1Q6ZW49 1069 aaPredicted RBP19.58■□□□□ 0.72
LIME1-209ENST00000494776 CDCA5Q96FF9 252 aa19.58■□□□□ 0.72
LIME1-209ENST00000494776 BCL11AQ9H165 835 aa19.58■□□□□ 0.72
LIME1-209ENST00000494776 VEZTQ9HBM0 779 aa19.58■□□□□ 0.72
LIME1-209ENST00000494776 COL1A1P02452 1464 aaPredicted RBP19.58■□□□□ 0.72
LIME1-209ENST00000494776 MYH13Q9UKX3 1938 aa19.57■□□□□ 0.72
LIME1-209ENST00000494776 DEFB115Q30KQ5 88 aa19.57■□□□□ 0.72
LIME1-209ENST00000494776 C2orf69Q8N8R5 385 aa19.57■□□□□ 0.72
LIME1-209ENST00000494776 KIF1BPQ96EK5 621 aa19.57■□□□□ 0.72
LIME1-209ENST00000494776 DBNDD2Q9BQY9 259 aa19.57■□□□□ 0.72
LIME1-209ENST00000494776 CCDC8Q9H0W5 538 aaPredicted RBP19.57■□□□□ 0.72
LIME1-209ENST00000494776 ABCF2Q9UG63 623 aa19.57■□□□□ 0.72
LIME1-209ENST00000494776 POLR2AP24928 1970 aaKnown RBP19.57■□□□□ 0.72
LIME1-209ENST00000494776 TRPM7Q96QT4 1865 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 SALL1Q9NSC2 1324 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 RAB11FIP3O75154 756 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 SPTY2D1Q68D10 685 aaPredicted RBP19.56■□□□□ 0.72
LIME1-209ENST00000494776 AACSQ86V21 672 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 SPATA5Q8NB90 893 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 RHPN1Q8TCX5 695 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 CRBNQ96SW2 442 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 TLL2Q9Y6L7 1015 aa19.56■□□□□ 0.72
LIME1-209ENST00000494776 PDS5AQ29RF7 1337 aaKnown RBP19.55■□□□□ 0.72
LIME1-209ENST00000494776 ZBTB22O15209 634 aa19.55■□□□□ 0.72
LIME1-209ENST00000494776 ARID4AP29374 1257 aaPredicted RBP19.55■□□□□ 0.72
LIME1-209ENST00000494776 PRDX5P30044 214 aa19.55■□□□□ 0.72
LIME1-209ENST00000494776 NF2P35240 595 aa19.55■□□□□ 0.72
LIME1-209ENST00000494776 PRAMEF18Q5VWM3 479 aa19.55■□□□□ 0.72
LIME1-209ENST00000494776 CLASRPQ8N2M8 674 aaKnown RBP19.55■□□□□ 0.72
LIME1-209ENST00000494776 EAF2Q96CJ1 260 aaPredicted RBP19.55■□□□□ 0.72
LIME1-209ENST00000494776 MRIQ9BWK5 157 aa19.55■□□□□ 0.72
LIME1-209ENST00000494776 TDRD3Q9H7E2 651 aaKnown RBP19.55■□□□□ 0.72
LIME1-209ENST00000494776 GBA2Q9HCG7 927 aaPredicted RBP19.55■□□□□ 0.72
LIME1-209ENST00000494776 IL1RAPL2Q9NP60 686 aa19.55■□□□□ 0.72
LIME1-209ENST00000494776 CNTNAP1P78357 1384 aa19.55■□□□□ 0.72
LIME1-209ENST00000494776 RASSF10A6NK89 507 aa19.54■□□□□ 0.72
LIME1-209ENST00000494776 HHIPL2Q6UWX4 724 aa19.54■□□□□ 0.72
LIME1-209ENST00000494776 DZIP1Q86YF9 867 aaKnown RBP19.54■□□□□ 0.72
LIME1-209ENST00000494776 DEFB129Q9H1M3 183 aa19.54■□□□□ 0.72
LIME1-209ENST00000494776 HMG20BQ9P0W2 317 aa19.54■□□□□ 0.72
LIME1-209ENST00000494776 ZNF70Q9UC06 446 aaPredicted RBP19.54■□□□□ 0.72
LIME1-209ENST00000494776 GRM1Q13255 1194 aa19.53■□□□□ 0.72
LIME1-209ENST00000494776 TNFAIP1Q13829 316 aa19.53■□□□□ 0.72
LIME1-209ENST00000494776 TTLL12Q14166 644 aaPredicted RBP19.53■□□□□ 0.72
LIME1-209ENST00000494776 SPDYE2Q495Y8 402 aa19.53■□□□□ 0.72
LIME1-209ENST00000494776 ERICH6Q7L0X2 663 aa19.53■□□□□ 0.72
LIME1-209ENST00000494776 SAPCD2Q86UD0 394 aa19.53■□□□□ 0.72
LIME1-209ENST00000494776 ZDHHC15Q96MV8 337 aa19.53■□□□□ 0.72
LIME1-209ENST00000494776 TLR7Q9NYK1 1049 aaKnown RBP19.53■□□□□ 0.72
LIME1-209ENST00000494776 TMOD2Q9NZR1 351 aa19.53■□□□□ 0.72
LIME1-209ENST00000494776 DBNLQ9UJU6 430 aaKnown RBP19.53■□□□□ 0.72
LIME1-209ENST00000494776 AOX1Q06278 1338 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 IFIT2P09913 472 aaKnown RBP19.52■□□□□ 0.72
LIME1-209ENST00000494776 MCAMP43121 646 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 VEGFBP49765 207 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 HUNKP57058 714 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 DIXDC1Q155Q3 683 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 PI16Q6UXB8 463 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 SLF2Q8IX21 1173 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 SNRKQ9NRH2 765 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 PPP2R3BQ9Y5P8 575 aa19.52■□□□□ 0.72
LIME1-209ENST00000494776 TCP10L2B9ZVM9 353 aa19.51■□□□□ 0.71
LIME1-209ENST00000494776 ECE1P42892 770 aa19.51■□□□□ 0.71
LIME1-209ENST00000494776 TNNI2P48788 182 aa19.51■□□□□ 0.71
LIME1-209ENST00000494776 IFFO2Q5TF58 517 aa19.51■□□□□ 0.71
LIME1-209ENST00000494776 LRP2BPQ9P2M1 347 aa19.51■□□□□ 0.71
LIME1-209ENST00000494776 SUPT16HQ9Y5B9 1047 aaKnown RBP19.51■□□□□ 0.71
LIME1-209ENST00000494776 RASA3Q14644 834 aa19.5■□□□□ 0.71
LIME1-209ENST00000494776 APOBEC3HQ6NTF7 200 aaKnown RBP19.5■□□□□ 0.71
LIME1-209ENST00000494776 TBC1D9Q6ZT07 1266 aa19.5■□□□□ 0.71
LIME1-209ENST00000494776 ZNF512BQ96KM6 892 aaPredicted RBP19.5■□□□□ 0.71
LIME1-209ENST00000494776 LRRCC1Q9C099 1032 aa19.5■□□□□ 0.71
LIME1-209ENST00000494776 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
LIME1-209ENST00000494776 DAGLAQ9Y4D2 1042 aa19.5■□□□□ 0.71
LIME1-209ENST00000494776 FKBP1BP68106 108 aa19.49■□□□□ 0.71
LIME1-209ENST00000494776 CYP4F22Q6NT55 531 aa19.49■□□□□ 0.71
LIME1-209ENST00000494776 HHIPL1Q96JK4 782 aa19.49■□□□□ 0.71
LIME1-209ENST00000494776 CAPNS2Q96L46 248 aa19.49■□□□□ 0.71
LIME1-209ENST00000494776 PCDHB15Q9Y5E8 787 aa19.49■□□□□ 0.71
LIME1-209ENST00000494776 WDR33Q9C0J8 1336 aaKnown RBP19.49■□□□□ 0.71
LIME1-209ENST00000494776 ECM29Q5VYK3 1845 aa19.48■□□□□ 0.71
LIME1-209ENST00000494776 CACNB3P54284 484 aa19.48■□□□□ 0.71
LIME1-209ENST00000494776 GSTO1P78417 241 aa19.48■□□□□ 0.71
LIME1-209ENST00000494776 PRKG1Q13976 671 aa19.48■□□□□ 0.71
LIME1-209ENST00000494776 SUPT20HL1Q3ZLR7 823 aa19.48■□□□□ 0.71
LIME1-209ENST00000494776 ZAP70P43403 619 aa19.47■□□□□ 0.71
LIME1-209ENST00000494776 MECOMQ03112 1051 aa19.47■□□□□ 0.71
LIME1-209ENST00000494776 ARMC9Q7Z3E5 817 aa19.47■□□□□ 0.71
LIME1-209ENST00000494776 DCTPP1Q9H773 170 aa19.47■□□□□ 0.71
LIME1-209ENST00000494776 USP40Q9NVE5 1235 aa19.47■□□□□ 0.71
LIME1-209ENST00000494776 LDHCP07864 332 aa19.46■□□□□ 0.71
LIME1-209ENST00000494776 HSPA1AP0DMV8 641 aaKnown RBP19.46■□□□□ 0.71
LIME1-209ENST00000494776 HSPA1BP0DMV9 641 aaKnown RBP19.46■□□□□ 0.71
LIME1-209ENST00000494776 ZNF157P51786 506 aaPredicted RBP19.46■□□□□ 0.71
LIME1-209ENST00000494776 RGMBQ6NW40 437 aa19.46■□□□□ 0.71
LIME1-209ENST00000494776 UBE2Q2LH0YL09 131 aa19.45■□□□□ 0.7
LIME1-209ENST00000494776 PPP1R12BO60237 982 aaPredicted RBP19.45■□□□□ 0.7
LIME1-209ENST00000494776 SMARCA5O60264 1052 aaPredicted RBP19.45■□□□□ 0.7
LIME1-209ENST00000494776 CYP2E1P05181 493 aaPredicted RBP19.45■□□□□ 0.7
LIME1-209ENST00000494776 AAMPQ13685 434 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms