RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 GJA5P36382 358 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 SPRYD7Q5W111 196 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 ARMC9Q7Z3E5 817 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 DZIP1LQ8IYY4 767 aaKnown RBP14.59□□□□□ -0.07
VTI1A-208ENST00000494728 TEPSINQ96N21 525 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 R3HDMLQ9H3Y0 253 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
VTI1A-208ENST00000494728 PA2G4Q9UQ80 394 aaKnown RBP14.59□□□□□ -0.07
VTI1A-208ENST00000494728 PPP2R3BQ9Y5P8 575 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 DOCK2Q92608 1830 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 MYO1BO43795 1136 aa14.58□□□□□ -0.08
VTI1A-208ENST00000494728 TM4SF4P48230 202 aa14.58□□□□□ -0.08
VTI1A-208ENST00000494728 CACNB3P54284 484 aa14.58□□□□□ -0.08
VTI1A-208ENST00000494728 VPS37DQ86XT2 251 aa14.58□□□□□ -0.08
VTI1A-208ENST00000494728 KIF16BQ96L93 1317 aa14.58□□□□□ -0.08
VTI1A-208ENST00000494728 AK9Q5TCS8 1911 aa14.58□□□□□ -0.08
VTI1A-208ENST00000494728 ZSWIM8A7E2V4 1837 aa14.57□□□□□ -0.08
VTI1A-208ENST00000494728 TCP10L2B9ZVM9 353 aa14.57□□□□□ -0.08
VTI1A-208ENST00000494728 USP2O75604 605 aaPredicted RBP14.57□□□□□ -0.08
VTI1A-208ENST00000494728 CAVIN4Q5BKX8 364 aa14.57□□□□□ -0.08
VTI1A-208ENST00000494728 WNK4Q96J92 1243 aa14.57□□□□□ -0.08
VTI1A-208ENST00000494728 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
VTI1A-208ENST00000494728 TMEM39BQ9GZU3 492 aa14.57□□□□□ -0.08
VTI1A-208ENST00000494728 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-208ENST00000494728 ZNF296Q8WUU4 475 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-208ENST00000494728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-208ENST00000494728 MYO5AQ9Y4I1 1855 aaKnown RBP14.55□□□□□ -0.08
VTI1A-208ENST00000494728 IGF2BP3O00425 579 aaKnown RBP eCLIP14.55□□□□□ -0.08
VTI1A-208ENST00000494728 FRAT2O75474 233 aaPredicted RBP14.55□□□□□ -0.08
VTI1A-208ENST00000494728 BCAR3O75815 825 aa14.55□□□□□ -0.08
VTI1A-208ENST00000494728 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
VTI1A-208ENST00000494728 TRIM27P14373 513 aa14.55□□□□□ -0.08
VTI1A-208ENST00000494728 ADORA1P30542 326 aa14.55□□□□□ -0.08
VTI1A-208ENST00000494728 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
VTI1A-208ENST00000494728 TBC1D22AQ8WUA7 517 aa14.55□□□□□ -0.08
VTI1A-208ENST00000494728 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
VTI1A-208ENST00000494728 LPIN2Q92539 896 aa14.55□□□□□ -0.08
VTI1A-208ENST00000494728 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
VTI1A-208ENST00000494728 CIAO1O76071 339 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 SLC5A1P13866 664 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 PHKA1P46020 1223 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 SREBF2Q12772 1141 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 DIXDC1Q155Q3 683 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 ATP2B3Q16720 1220 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 SUPT20HL1Q3ZLR7 823 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 INTS3Q68E01 1043 aaKnown RBP14.54□□□□□ -0.08
VTI1A-208ENST00000494728 APOBEC3HQ6NTF7 200 aaKnown RBP14.54□□□□□ -0.08
VTI1A-208ENST00000494728 CTU1Q7Z7A3 348 aaKnown RBP14.54□□□□□ -0.08
VTI1A-208ENST00000494728 MIER1Q8N108 512 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 TEKT1Q969V4 418 aa14.54□□□□□ -0.08
VTI1A-208ENST00000494728 GPR25O00155 361 aa14.53□□□□□ -0.08
VTI1A-208ENST00000494728 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
VTI1A-208ENST00000494728 PRDX5P30044 214 aa14.53□□□□□ -0.08
VTI1A-208ENST00000494728 HDLBPQ00341 1268 aaKnown RBP14.53□□□□□ -0.08
VTI1A-208ENST00000494728 TNFAIP1Q13829 316 aa14.53□□□□□ -0.08
VTI1A-208ENST00000494728 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.53□□□□□ -0.08
VTI1A-208ENST00000494728 ZDHHC15Q96MV8 337 aa14.53□□□□□ -0.08
VTI1A-208ENST00000494728 CFHR5Q9BXR6 569 aa14.53□□□□□ -0.08
VTI1A-208ENST00000494728 ELP3Q9H9T3 547 aa14.53□□□□□ -0.08
VTI1A-208ENST00000494728 COPRSQ9NQ92 184 aa14.53□□□□□ -0.08
VTI1A-208ENST00000494728 CDK5RAP2Q96SN8 1893 aa14.52□□□□□ -0.08
VTI1A-208ENST00000494728 IREB2P48200 963 aaKnown RBP14.52□□□□□ -0.09
VTI1A-208ENST00000494728 RGS19P49795 217 aa14.52□□□□□ -0.09
VTI1A-208ENST00000494728 VGLL4Q14135 290 aa14.52□□□□□ -0.09
VTI1A-208ENST00000494728 IFNL1Q8IU54 200 aa14.52□□□□□ -0.09
VTI1A-208ENST00000494728 ARHGAP45Q92619 1136 aa14.52□□□□□ -0.09
VTI1A-208ENST00000494728 SLC10A4Q96EP9 437 aa14.52□□□□□ -0.09
VTI1A-208ENST00000494728 PTPN18Q99952 460 aa14.52□□□□□ -0.09
VTI1A-208ENST00000494728 PTPRFP10586 1907 aa14.52□□□□□ -0.09
VTI1A-208ENST00000494728 RPAP1Q9BWH6 1393 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-208ENST00000494728 CAP1Q01518 475 aa14.51□□□□□ -0.09
VTI1A-208ENST00000494728 ANKRD13AQ8IZ07 590 aa14.51□□□□□ -0.09
VTI1A-208ENST00000494728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.51□□□□□ -0.09
VTI1A-208ENST00000494728 CLUAP1Q96AJ1 413 aa14.51□□□□□ -0.09
VTI1A-208ENST00000494728 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
VTI1A-208ENST00000494728 DAGLAQ9Y4D2 1042 aa14.51□□□□□ -0.09
VTI1A-208ENST00000494728 MAST2Q6P0Q8 1798 aa14.51□□□□□ -0.09
VTI1A-208ENST00000494728 PHIPQ8WWQ0 1821 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 RFX7Q2KHR2 1363 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 MAST3O60307 1309 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 MANSC4A6NHS7 340 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-208ENST00000494728 IL15P40933 162 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-208ENST00000494728 SOX10P56693 466 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 NFIAQ12857 509 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 MTX1Q13505 466 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 HHIPL2Q6UWX4 724 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 ATF7IPQ6VMQ6 1270 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 FRAT1Q92837 279 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-208ENST00000494728 OPTNQ96CV9 577 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 CEP126Q9P2H0 1117 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 SUGT1Q9Y2Z0 365 aa14.5□□□□□ -0.09
VTI1A-208ENST00000494728 KIAA0100Q14667 2235 aaKnown RBP14.5□□□□□ -0.09
VTI1A-208ENST00000494728 RBBP6Q7Z6E9 1792 aaKnown RBP14.5□□□□□ -0.09
VTI1A-208ENST00000494728 DOCK1Q14185 1865 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 SRGAP3O43295 1099 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 RASGRF1Q13972 1273 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 NOM1Q5C9Z4 860 aaKnown RBP14.49□□□□□ -0.09
VTI1A-208ENST00000494728 CCDC102BQ68D86 513 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 WDR66Q8TBY9 1149 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 MS4A4AQ96JQ5 239 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms