RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 KLF15Q9UIH9 416 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 PPP2R3BQ9Y5P8 575 aa8.5□□□□□ -1.05
SNX13-210ENST00000494402 SERTM1A2A2V5 107 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 TCERG1O14776 1098 aaKnown RBP8.49□□□□□ -1.05
SNX13-210ENST00000494402 RFPL3O75679 317 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 TCEA3O75764 348 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 MAP3K10Q02779 954 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 PICALMQ13492 652 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 STK11IPQ8N1F8 1099 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 MAGEB6Q8N7X4 407 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 PHC3Q8NDX5 983 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 NEUROD6Q96NK8 337 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 FERD3LQ96RJ6 166 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 SLC26A8Q96RN1 970 aa8.49□□□□□ -1.05
SNX13-210ENST00000494402 KCTD15Q96SI1 283 aaPredicted RBP8.49□□□□□ -1.05
SNX13-210ENST00000494402 SMAD5Q99717 465 aaKnown RBP8.49□□□□□ -1.05
SNX13-210ENST00000494402 ERVH48-1M5A8F1 160 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 EML1O00423 815 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 PHACTR2O75167 634 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 NEFMP07197 916 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 PTPN5P54829 565 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 PABPC4Q13310 644 aaKnown RBP eCLIP8.48□□□□□ -1.05
SNX13-210ENST00000494402 GRM2Q14416 872 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 ZC3H12BQ5HYM0 836 aaKnown RBP8.48□□□□□ -1.05
SNX13-210ENST00000494402 FAM83BQ5T0W9 1011 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 FBXW10Q5XX13 1052 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
SNX13-210ENST00000494402 ERAP2Q6P179 960 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 XKR5Q6UX68 686 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 RINLQ6ZS11 566 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 CPXCR1Q8N123 301 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 ENAHQ8N8S7 591 aaPredicted RBP8.48□□□□□ -1.05
SNX13-210ENST00000494402 CHMP4CQ96CF2 233 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 HOOK2Q96ED9 719 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 PPM1HQ9ULR3 514 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 NOB1Q9ULX3 412 aaKnown RBP8.48□□□□□ -1.05
SNX13-210ENST00000494402 DAAM1Q9Y4D1 1078 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
SNX13-210ENST00000494402 GSG1L2A8MUP6 293 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 DDAH1O94760 285 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 PF4P02776 101 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 TRIM27P14373 513 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 CRKP46108 304 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 LMNB2Q03252 620 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 MAP3K11Q16584 847 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 LONRF2Q1L5Z9 754 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 ANO1Q5XXA6 986 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 SV2BQ7L1I2 683 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 ZBTB46Q86UZ6 589 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
SNX13-210ENST00000494402 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 BAP1Q92560 729 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 MTMR8Q96EF0 704 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 CDC5LQ99459 802 aaKnown RBP8.47□□□□□ -1.05
SNX13-210ENST00000494402 RTFDC1Q9BY42 306 aaPredicted RBP8.47□□□□□ -1.05
SNX13-210ENST00000494402 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
SNX13-210ENST00000494402 ATG3Q9NT62 314 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 USP25Q9UHP3 1055 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 ZNF180Q9UJW8 692 aa8.47□□□□□ -1.05
SNX13-210ENST00000494402 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 SLC26A4O43511 780 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 GNRH1P01148 92 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 HTR3AP46098 478 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 PPM1FP49593 454 aaPredicted RBP8.46□□□□□ -1.06
SNX13-210ENST00000494402 COPS2P61201 443 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 ITKQ08881 620 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 CAMK2GQ13555 558 aaPredicted RBP8.46□□□□□ -1.06
SNX13-210ENST00000494402 SEZ6Q53EL9 994 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 SDR16C5Q8N3Y7 309 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 ANKRD42Q8N9B4 389 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 ZNF511Q8NB15 262 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 C3orf58Q8NDZ4 430 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 GTF2A1LQ9UNN4 478 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 ZNF232Q9UNY5 417 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 TRAK1Q9UPV9 953 aa8.46□□□□□ -1.06
SNX13-210ENST00000494402 RFPL1O75677 317 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 LIG3P49916 1009 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 CASP7P55210 303 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 MTMR1Q13613 665 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 TEAD4Q15561 434 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 PPP2R5EQ16537 467 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 INTS6LQ5JSJ4 861 aaKnown RBP8.45□□□□□ -1.06
SNX13-210ENST00000494402 FAM196AQ6ZSG2 479 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 CYP2U1Q7Z449 544 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 GALNT12Q8IXK2 581 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 SPSB2Q99619 263 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 TNKS2Q9H2K2 1166 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 PRDM9Q9NQV7 894 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 SLC5A4Q9NY91 659 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 HCN4Q9Y3Q4 1203 aa8.45□□□□□ -1.06
SNX13-210ENST00000494402 U2AF1L5P0DN76 240 aaPredicted RBP8.44□□□□□ -1.06
SNX13-210ENST00000494402 DGKGP49619 791 aa8.44□□□□□ -1.06
SNX13-210ENST00000494402 U2AF1Q01081 240 aaKnown RBP eCLIP8.44□□□□□ -1.06
SNX13-210ENST00000494402 SIM2Q14190 667 aaPredicted RBP8.44□□□□□ -1.06
SNX13-210ENST00000494402 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms