RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 ZFYVE1Q9HBF4 777 aa9.92□□□□□ -0.82
MSL3-217ENST00000494268 GPN3Q9UHW5 284 aaPredicted RBP9.92□□□□□ -0.82
MSL3-217ENST00000494268 F8W735 103 aaPredicted RBP9.91□□□□□ -0.82
MSL3-217ENST00000494268 DLGAP3O95886 979 aa9.91□□□□□ -0.82
MSL3-217ENST00000494268 CTSHP09668 335 aa9.91□□□□□ -0.82
MSL3-217ENST00000494268 IREB2P48200 963 aaKnown RBP9.91□□□□□ -0.82
MSL3-217ENST00000494268 NRG1Q02297 640 aaPredicted RBP9.91□□□□□ -0.82
MSL3-217ENST00000494268 ACAD11Q709F0 780 aa9.91□□□□□ -0.82
MSL3-217ENST00000494268 TMEM130Q8N3G9 435 aa9.91□□□□□ -0.82
MSL3-217ENST00000494268 WFDC12Q8WWY7 111 aa9.91□□□□□ -0.82
MSL3-217ENST00000494268 SORBS3O60504 671 aa9.9□□□□□ -0.82
MSL3-217ENST00000494268 ECEL1O95672 775 aa9.9□□□□□ -0.82
MSL3-217ENST00000494268 NOS3P29474 1203 aa9.9□□□□□ -0.82
MSL3-217ENST00000494268 GPAT2Q6NUI2 795 aa9.9□□□□□ -0.82
MSL3-217ENST00000494268 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.9□□□□□ -0.82
MSL3-217ENST00000494268 AKTIPQ9H8T0 292 aa9.9□□□□□ -0.82
MSL3-217ENST00000494268 TMEM39AQ9NV64 488 aa9.9□□□□□ -0.82
MSL3-217ENST00000494268 LOC100289279A0A1B0GTE1 492 aa9.89□□□□□ -0.83
MSL3-217ENST00000494268 RBM47A0AV96 593 aaKnown RBP9.89□□□□□ -0.83
MSL3-217ENST00000494268 CTSBP07858 339 aa9.89□□□□□ -0.83
MSL3-217ENST00000494268 MAOBP27338 520 aa9.89□□□□□ -0.83
MSL3-217ENST00000494268 MEI1Q5TIA1 1274 aa9.89□□□□□ -0.83
MSL3-217ENST00000494268 NECAB3Q96P71 396 aaPredicted RBP9.89□□□□□ -0.83
MSL3-217ENST00000494268 GATA4P43694 442 aa9.88□□□□□ -0.83
MSL3-217ENST00000494268 POU4F3Q15319 338 aa9.88□□□□□ -0.83
MSL3-217ENST00000494268 STK35Q8TDR2 534 aa9.88□□□□□ -0.83
MSL3-217ENST00000494268 MRS2Q9HD23 443 aa9.88□□□□□ -0.83
MSL3-217ENST00000494268 VTI1BQ9UEU0 232 aa9.88□□□□□ -0.83
MSL3-217ENST00000494268 PPM1HQ9ULR3 514 aa9.88□□□□□ -0.83
MSL3-217ENST00000494268 ENC1O14682 589 aa9.87□□□□□ -0.83
MSL3-217ENST00000494268 PAGE1O75459 146 aa9.87□□□□□ -0.83
MSL3-217ENST00000494268 CYP11A1P05108 521 aa9.87□□□□□ -0.83
MSL3-217ENST00000494268 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
MSL3-217ENST00000494268 TXNRD3Q86VQ6 643 aa9.87□□□□□ -0.83
MSL3-217ENST00000494268 DDX54Q8TDD1 881 aaKnown RBP9.87□□□□□ -0.83
MSL3-217ENST00000494268 SPOCK3Q9BQ16 436 aa9.87□□□□□ -0.83
MSL3-217ENST00000494268 TTF2Q9UNY4 1162 aaKnown RBP9.87□□□□□ -0.83
MSL3-217ENST00000494268 PROCP04070 461 aa9.86□□□□□ -0.83
MSL3-217ENST00000494268 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
MSL3-217ENST00000494268 ZC3H12CQ9C0D7 883 aaKnown RBP9.86□□□□□ -0.83
MSL3-217ENST00000494268 CELA3AP09093 270 aa9.85□□□□□ -0.83
MSL3-217ENST00000494268 MEGF10Q96KG7 1140 aa9.85□□□□□ -0.83
MSL3-217ENST00000494268 CORO1BQ9BR76 489 aa9.85□□□□□ -0.83
MSL3-217ENST00000494268 CEP44Q9C0F1 390 aa9.85□□□□□ -0.83
MSL3-217ENST00000494268 MSTNO14793 375 aa9.84□□□□□ -0.83
MSL3-217ENST00000494268 GLB1P16278 677 aa9.84□□□□□ -0.83
MSL3-217ENST00000494268 AP3B2Q13367 1082 aa9.84□□□□□ -0.83
MSL3-217ENST00000494268 MRPL58Q14197 206 aaKnown RBP9.84□□□□□ -0.83
MSL3-217ENST00000494268 SULF2Q8IWU5 870 aa9.84□□□□□ -0.83
MSL3-217ENST00000494268 ANKRD24Q8TF21 1146 aa9.84□□□□□ -0.83
MSL3-217ENST00000494268 UBL7Q96S82 380 aaPredicted RBP9.84□□□□□ -0.83
MSL3-217ENST00000494268 EIF4EBP3O60516 100 aaPredicted RBP9.83□□□□□ -0.84
MSL3-217ENST00000494268 BMP6P22004 513 aa9.83□□□□□ -0.84
MSL3-217ENST00000494268 DOC2BQ14184 412 aa9.83□□□□□ -0.84
MSL3-217ENST00000494268 TAF1CQ15572 869 aaPredicted RBP9.83□□□□□ -0.84
MSL3-217ENST00000494268 EXOSC6Q5RKV6 272 aaKnown RBP9.83□□□□□ -0.84
MSL3-217ENST00000494268 RASIP1Q5U651 963 aa9.83□□□□□ -0.84
MSL3-217ENST00000494268 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
MSL3-217ENST00000494268 RNF208Q9H0X6 261 aa9.83□□□□□ -0.84
MSL3-217ENST00000494268 MEGF11A6BM72 1044 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 GSTP1P09211 210 aaKnown RBP9.82□□□□□ -0.84
MSL3-217ENST00000494268 NME2P22392 152 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 ARNTP27540 789 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 CCDC85BQ15834 202 aaPredicted RBP9.82□□□□□ -0.84
MSL3-217ENST00000494268 MPRIPQ6WCQ1 1025 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 Q6ZS46 218 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 PDZD3Q86UT5 571 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 GRIN3AQ8TCU5 1115 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 CRELD1Q96HD1 420 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 SSBP4Q9BWG4 385 aaPredicted RBP9.82□□□□□ -0.84
MSL3-217ENST00000494268 CCDC86Q9H6F5 360 aaKnown RBP9.82□□□□□ -0.84
MSL3-217ENST00000494268 USP31Q70CQ4 1352 aa9.82□□□□□ -0.84
MSL3-217ENST00000494268 DRD2P14416 443 aa9.81□□□□□ -0.84
MSL3-217ENST00000494268 NUTM2GQ5VZR2 741 aa9.81□□□□□ -0.84
MSL3-217ENST00000494268 SV2BQ7L1I2 683 aa9.81□□□□□ -0.84
MSL3-217ENST00000494268 DZIP1LQ8IYY4 767 aaKnown RBP9.81□□□□□ -0.84
MSL3-217ENST00000494268 WDR89Q96FK6 387 aaPredicted RBP9.81□□□□□ -0.84
MSL3-217ENST00000494268 TPSG1Q9NRR2 321 aa9.81□□□□□ -0.84
MSL3-217ENST00000494268 UNCXA6NJT0 531 aa9.8□□□□□ -0.84
MSL3-217ENST00000494268 LIG1P18858 919 aa9.8□□□□□ -0.84
MSL3-217ENST00000494268 PDE3AQ14432 1141 aa9.8□□□□□ -0.84
MSL3-217ENST00000494268 KCNB2Q92953 911 aa9.8□□□□□ -0.84
MSL3-217ENST00000494268 ZNF428Q96B54 188 aa9.8□□□□□ -0.84
MSL3-217ENST00000494268 CBX8Q9HC52 389 aa9.8□□□□□ -0.84
MSL3-217ENST00000494268 MAP3K11Q16584 847 aa9.79□□□□□ -0.84
MSL3-217ENST00000494268 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
MSL3-217ENST00000494268 MAP1SQ66K74 1059 aaPredicted RBP9.79□□□□□ -0.84
MSL3-217ENST00000494268 C12orf50Q8NA57 414 aaPredicted RBP9.79□□□□□ -0.84
MSL3-217ENST00000494268 ZNF862O60290 1169 aa9.78□□□□□ -0.84
MSL3-217ENST00000494268 IGHA1P01876 353 aa9.78□□□□□ -0.84
MSL3-217ENST00000494268 ST13P50502 369 aaKnown RBP9.78□□□□□ -0.84
MSL3-217ENST00000494268 ZNF252P-AS1Q0IIN9 211 aa9.78□□□□□ -0.84
MSL3-217ENST00000494268 PCNX4Q63HM2 1172 aa9.78□□□□□ -0.84
MSL3-217ENST00000494268 SMG8Q8ND04 991 aaKnown RBP9.78□□□□□ -0.84
MSL3-217ENST00000494268 TP53INP1Q96A56 240 aa9.78□□□□□ -0.84
MSL3-217ENST00000494268 BACH2Q9BYV9 841 aa9.78□□□□□ -0.84
MSL3-217ENST00000494268 RAD18Q9NS91 495 aa9.78□□□□□ -0.84
MSL3-217ENST00000494268 AOC2O75106 756 aa9.77□□□□□ -0.85
MSL3-217ENST00000494268 PREPP48147 710 aa9.77□□□□□ -0.85
MSL3-217ENST00000494268 AKAP4Q5JQC9 854 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms