RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 HDLBPQ00341 1268 aaKnown RBP18.02■□□□□ 0.48
ACTB-213ENST00000493945 NAA16Q6N069 864 aaPredicted RBP18.02■□□□□ 0.48
ACTB-213ENST00000493945 TEKT1Q969V4 418 aa18.02■□□□□ 0.48
ACTB-213ENST00000493945 DIAPH3Q9NSV4 1193 aa18.02■□□□□ 0.48
ACTB-213ENST00000493945 TTF2Q9UNY4 1162 aaKnown RBP18.02■□□□□ 0.48
ACTB-213ENST00000493945 ZNF646O15015 1829 aaPredicted RBP18.02■□□□□ 0.47
ACTB-213ENST00000493945 ZNF541Q9H0D2 1346 aa18.01■□□□□ 0.47
ACTB-213ENST00000493945 H7C1D1 291 aa18.01■□□□□ 0.47
ACTB-213ENST00000493945 USP17L8P0C7I0 530 aa18.01■□□□□ 0.47
ACTB-213ENST00000493945 PRELPP51888 382 aa18.01■□□□□ 0.47
ACTB-213ENST00000493945 RUFY2Q8WXA3 655 aa18.01■□□□□ 0.47
ACTB-213ENST00000493945 MYH2Q9UKX2 1941 aa18.01■□□□□ 0.47
ACTB-213ENST00000493945 SCN4AP35499 1836 aa18■□□□□ 0.47
ACTB-213ENST00000493945 GLTPD2A6NH11 291 aa18■□□□□ 0.47
ACTB-213ENST00000493945 MYO1BO43795 1136 aa18■□□□□ 0.47
ACTB-213ENST00000493945 BAG3O95817 575 aa18■□□□□ 0.47
ACTB-213ENST00000493945 MAP4K4O95819 1239 aaPredicted RBP18■□□□□ 0.47
ACTB-213ENST00000493945 PLCG2P16885 1265 aa18■□□□□ 0.47
ACTB-213ENST00000493945 PRDX5P30044 214 aa18■□□□□ 0.47
ACTB-213ENST00000493945 MFAP1P55081 439 aaKnown RBP18■□□□□ 0.47
ACTB-213ENST00000493945 SLC9C2Q5TAH2 1124 aa18■□□□□ 0.47
ACTB-213ENST00000493945 KIAA0825Q8IV33 1275 aa18■□□□□ 0.47
ACTB-213ENST00000493945 MRIQ9BWK5 157 aa18■□□□□ 0.47
ACTB-213ENST00000493945 SERPINA10Q9UK55 444 aa18■□□□□ 0.47
ACTB-213ENST00000493945 GSPT1P15170 499 aaKnown RBP17.99■□□□□ 0.47
ACTB-213ENST00000493945 SDSP20132 328 aa17.99■□□□□ 0.47
ACTB-213ENST00000493945 GMPSP49915 693 aaPredicted RBP17.99■□□□□ 0.47
ACTB-213ENST00000493945 RBM5P52756 815 aaKnown RBP eCLIP17.99■□□□□ 0.471e-6■■■□□ 16.7
ACTB-213ENST00000493945 UBE3CQ15386 1083 aa17.99■□□□□ 0.47
ACTB-213ENST00000493945 TBC1D9Q6ZT07 1266 aa17.99■□□□□ 0.47
ACTB-213ENST00000493945 PIH1D3Q9NQM4 214 aaKnown RBP17.99■□□□□ 0.47
ACTB-213ENST00000493945 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
ACTB-213ENST00000493945 MYO5AQ9Y4I1 1855 aaKnown RBP17.99■□□□□ 0.47
ACTB-213ENST00000493945 F8W031 263 aaPredicted RBP17.98■□□□□ 0.47
ACTB-213ENST00000493945 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
ACTB-213ENST00000493945 HHIPL2Q6UWX4 724 aa17.98■□□□□ 0.47
ACTB-213ENST00000493945 MAGEB6Q8N7X4 407 aa17.98■□□□□ 0.47
ACTB-213ENST00000493945 L3MBTL3Q96JM7 780 aaPredicted RBP17.98■□□□□ 0.47
ACTB-213ENST00000493945 ANTXR1Q9H6X2 564 aa17.98■□□□□ 0.47
ACTB-213ENST00000493945 KCNQ5Q9NR82 932 aa17.98■□□□□ 0.47
ACTB-213ENST00000493945 TMOD2Q9NZR1 351 aa17.98■□□□□ 0.47
ACTB-213ENST00000493945 RAD50Q92878 1312 aa17.98■□□□□ 0.47
ACTB-213ENST00000493945 CDC45O75419 566 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 PDE6AP16499 860 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 CYP7A1P22680 504 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 MECOMQ03112 1051 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 DLGAP5Q15398 846 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 CERS5Q8N5B7 392 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 APPBP2Q92624 585 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 NSUN4Q96CB9 384 aaKnown RBP17.97■□□□□ 0.47
ACTB-213ENST00000493945 WDR90Q96KV7 1748 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 MROH7-TTC4A0A0A0MT08 1334 aa17.97■□□□□ 0.47
ACTB-213ENST00000493945 DDNO94850 711 aaPredicted RBP17.96■□□□□ 0.47
ACTB-213ENST00000493945 ADD2P35612 726 aa17.96■□□□□ 0.47
ACTB-213ENST00000493945 MICALL2Q8IY33 904 aa17.96■□□□□ 0.47
ACTB-213ENST00000493945 AIDAQ96BJ3 306 aa17.96■□□□□ 0.47
ACTB-213ENST00000493945 EDC3Q96F86 508 aaKnown RBP17.96■□□□□ 0.47
ACTB-213ENST00000493945 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
ACTB-213ENST00000493945 GMLQ99445 158 aa17.96■□□□□ 0.47
ACTB-213ENST00000493945 GPRC5DQ9NZD1 345 aa17.96■□□□□ 0.47
ACTB-213ENST00000493945 CNOT7Q9UIV1 285 aaKnown RBP17.96■□□□□ 0.47
ACTB-213ENST00000493945 HACL1Q9UJ83 578 aa17.96■□□□□ 0.47
ACTB-213ENST00000493945 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
ACTB-213ENST00000493945 ECM29Q5VYK3 1845 aa17.95■□□□□ 0.46
ACTB-213ENST00000493945 CRKP46108 304 aa17.95■□□□□ 0.46
ACTB-213ENST00000493945 FAM163AQ96GL9 167 aaPredicted RBP17.95■□□□□ 0.46
ACTB-213ENST00000493945 HELLSQ9NRZ9 838 aa17.95■□□□□ 0.46
ACTB-213ENST00000493945 ADARB2Q9NS39 739 aaKnown RBP17.95■□□□□ 0.46
ACTB-213ENST00000493945 ZNF532Q9HCE3 1301 aa17.95■□□□□ 0.46
ACTB-213ENST00000493945 GNAT2P19087 354 aa17.94■□□□□ 0.46
ACTB-213ENST00000493945 SCNN1DP51172 638 aa17.94■□□□□ 0.46
ACTB-213ENST00000493945 ZNF280AP59817 542 aaPredicted RBP17.94■□□□□ 0.46
ACTB-213ENST00000493945 ZDHHC15Q96MV8 337 aa17.94■□□□□ 0.46
ACTB-213ENST00000493945 MXD3Q9BW11 206 aa17.94■□□□□ 0.46
ACTB-213ENST00000493945 MYOZ2Q9NPC6 264 aa17.94■□□□□ 0.46
ACTB-213ENST00000493945 GAKO14976 1311 aa17.94■□□□□ 0.46
ACTB-213ENST00000493945 MAGEB6P1A0A0J9YX57 407 aa17.93■□□□□ 0.46
ACTB-213ENST00000493945 KIF4BQ2VIQ3 1234 aa17.93■□□□□ 0.46
ACTB-213ENST00000493945 CFAP100Q494V2 611 aa17.93■□□□□ 0.46
ACTB-213ENST00000493945 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
ACTB-213ENST00000493945 SKAP1Q86WV1 359 aa17.93■□□□□ 0.46
ACTB-213ENST00000493945 MTMR14Q8NCE2 650 aa17.93■□□□□ 0.46
ACTB-213ENST00000493945 BTDP43251 543 aa17.92■□□□□ 0.46
ACTB-213ENST00000493945 TNFAIP1Q13829 316 aa17.92■□□□□ 0.46
ACTB-213ENST00000493945 DIXDC1Q155Q3 683 aa17.92■□□□□ 0.46
ACTB-213ENST00000493945 MCMDC2Q4G0Z9 681 aa17.92■□□□□ 0.46
ACTB-213ENST00000493945 AMOTL1Q8IY63 956 aa17.92■□□□□ 0.46
ACTB-213ENST00000493945 CRNKL1Q9BZJ0 848 aaKnown RBP17.92■□□□□ 0.46
ACTB-213ENST00000493945 DAGLAQ9Y4D2 1042 aa17.92■□□□□ 0.46
ACTB-213ENST00000493945 VEGFAP15692 232 aaPredicted RBP17.91■□□□□ 0.46
ACTB-213ENST00000493945 ZMYM1Q5SVZ6 1142 aa17.91■□□□□ 0.46
ACTB-213ENST00000493945 KIAA1211Q6ZU35 1233 aa17.91■□□□□ 0.46
ACTB-213ENST00000493945 USP50Q70EL3 339 aaPredicted RBP17.91■□□□□ 0.46
ACTB-213ENST00000493945 RPAP1Q9BWH6 1393 aaPredicted RBP17.91■□□□□ 0.46
ACTB-213ENST00000493945 GPR75-ASB3A0A0A6YYF3 556 aa17.9■□□□□ 0.46
ACTB-213ENST00000493945 SPDYE2BA6NHP3 402 aa17.9■□□□□ 0.46
ACTB-213ENST00000493945 SPDYE6P0CI01 402 aa17.9■□□□□ 0.46
ACTB-213ENST00000493945 TNNI2P48788 182 aa17.9■□□□□ 0.46
ACTB-213ENST00000493945 CWC27Q6UX04 472 aaKnown RBP17.9■□□□□ 0.46
ACTB-213ENST00000493945 NACAP1Q9BZK3 213 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms