RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 IFIT1P09914 478 aaKnown RBP15.72■□□□□ 0.11
HSPG2-212ENST00000493940 PHKA1P46020 1223 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 CRKP46108 304 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 RBM5P52756 815 aaKnown RBP eCLIP15.72■□□□□ 0.11
HSPG2-212ENST00000493940 MLLT1Q03111 559 aaPredicted RBP15.72■□□□□ 0.11
HSPG2-212ENST00000493940 ATP2B3Q16720 1220 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 VPS37DQ86XT2 251 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
HSPG2-212ENST00000493940 DZIP1LQ8IYY4 767 aaKnown RBP15.72■□□□□ 0.11
HSPG2-212ENST00000493940 C1orf115Q9H7X2 142 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 CEP126Q9P2H0 1117 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 ZNF70Q9UC06 446 aaPredicted RBP15.72■□□□□ 0.11
HSPG2-212ENST00000493940 FBXO3Q9UK99 471 aa15.72■□□□□ 0.11
HSPG2-212ENST00000493940 SLC5A1P13866 664 aa15.71■□□□□ 0.11
HSPG2-212ENST00000493940 IL15P40933 162 aaPredicted RBP15.71■□□□□ 0.11
HSPG2-212ENST00000493940 TFCP2Q12800 502 aa15.71■□□□□ 0.11
HSPG2-212ENST00000493940 NOGQ13253 232 aa15.71■□□□□ 0.11
HSPG2-212ENST00000493940 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
HSPG2-212ENST00000493940 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
HSPG2-212ENST00000493940 SERPINA10Q9UK55 444 aa15.71■□□□□ 0.11
HSPG2-212ENST00000493940 ZBTB7BO15156 539 aaPredicted RBP15.7■□□□□ 0.1
HSPG2-212ENST00000493940 FRAT2O75474 233 aaPredicted RBP15.7■□□□□ 0.1
HSPG2-212ENST00000493940 GNAI2P04899 355 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 CACNB3P54284 484 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 FKBP1BP68106 108 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 RASA3Q14644 834 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 LDLRAD1Q5T700 205 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 CLMNQ96JQ2 1002 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 TEPSINQ96N21 525 aa15.7■□□□□ 0.1
HSPG2-212ENST00000493940 MKRN3Q13064 507 aaKnown RBP15.69■□□□□ 0.1
HSPG2-212ENST00000493940 TTLL12Q14166 644 aaPredicted RBP15.69■□□□□ 0.1
HSPG2-212ENST00000493940 APOBEC3HQ6NTF7 200 aaKnown RBP15.69■□□□□ 0.1
HSPG2-212ENST00000493940 PANK1Q8TE04 598 aa15.69■□□□□ 0.1
HSPG2-212ENST00000493940 MCOLN1Q9GZU1 580 aa15.69■□□□□ 0.1
HSPG2-212ENST00000493940 ANGEL1Q9UNK9 670 aaKnown RBP15.69■□□□□ 0.1
HSPG2-212ENST00000493940 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
HSPG2-212ENST00000493940 USP2O75604 605 aaPredicted RBP15.68■□□□□ 0.1
HSPG2-212ENST00000493940 PRDX5P30044 214 aa15.68■□□□□ 0.1
HSPG2-212ENST00000493940 POLA2Q14181 598 aa15.68■□□□□ 0.1
HSPG2-212ENST00000493940 CCDC102BQ68D86 513 aa15.68■□□□□ 0.1
HSPG2-212ENST00000493940 TMEM39BQ9GZU3 492 aa15.68■□□□□ 0.1
HSPG2-212ENST00000493940 RNF186Q9NXI6 227 aa15.68■□□□□ 0.1
HSPG2-212ENST00000493940 A0A1B0GUL7 405 aa15.67■□□□□ 0.1
HSPG2-212ENST00000493940 TRPA1O75762 1119 aa15.67■□□□□ 0.1
HSPG2-212ENST00000493940 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
HSPG2-212ENST00000493940 DIXDC1Q155Q3 683 aa15.67■□□□□ 0.1
HSPG2-212ENST00000493940 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
HSPG2-212ENST00000493940 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
HSPG2-212ENST00000493940 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.67■□□□□ 0.1
HSPG2-212ENST00000493940 HDLBPQ00341 1268 aaKnown RBP15.66■□□□□ 0.1
HSPG2-212ENST00000493940 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
HSPG2-212ENST00000493940 ZDHHC15Q96MV8 337 aa15.66■□□□□ 0.1
HSPG2-212ENST00000493940 MRIQ9BWK5 157 aa15.66■□□□□ 0.1
HSPG2-212ENST00000493940 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
HSPG2-212ENST00000493940 CDK5RAP2Q96SN8 1893 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 MYO1BO43795 1136 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 GJA5P36382 358 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 RASGRF1Q13972 1273 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 PI16Q6UXB8 463 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 ARMC9Q7Z3E5 817 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 ITPRIPQ8IWB1 547 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 SSH3Q8TE77 659 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 ZNF384Q8TF68 577 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 TEKT1Q969V4 418 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 R3HDMLQ9H3Y0 253 aa15.65■□□□□ 0.1
HSPG2-212ENST00000493940 NF2P35240 595 aa15.64■□□□□ 0.09
HSPG2-212ENST00000493940 HHIPL2Q6UWX4 724 aa15.64■□□□□ 0.09
HSPG2-212ENST00000493940 WDR66Q8TBY9 1149 aa15.64■□□□□ 0.09
HSPG2-212ENST00000493940 DAGLAQ9Y4D2 1042 aa15.64■□□□□ 0.09
HSPG2-212ENST00000493940 PPP2R3BQ9Y5P8 575 aa15.64■□□□□ 0.09
HSPG2-212ENST00000493940 DGKZQ13574 1117 aa15.63■□□□□ 0.09
HSPG2-212ENST00000493940 SPRYD7Q5W111 196 aa15.63■□□□□ 0.09
HSPG2-212ENST00000493940 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
HSPG2-212ENST00000493940 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
HSPG2-212ENST00000493940 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
HSPG2-212ENST00000493940 SUGT1Q9Y2Z0 365 aa15.63■□□□□ 0.09
HSPG2-212ENST00000493940 SALL1Q9NSC2 1324 aa15.63■□□□□ 0.09
HSPG2-212ENST00000493940 ZBTB22O15209 634 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 TM4SF4P48230 202 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 NFIAQ12857 509 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 CDC42EP5Q6NZY7 148 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.62■□□□□ 0.09
HSPG2-212ENST00000493940 ZFPM1Q8IX07 1006 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 SAGE1Q9NXZ1 904 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 HMG20BQ9P0W2 317 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 DENND2AQ9ULE3 1009 aa15.62■□□□□ 0.09
HSPG2-212ENST00000493940 TBC1D8O95759 1140 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 SLURP2P0DP57 97 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 G3BP1Q13283 466 aaKnown RBP eCLIP15.61■□□□□ 0.09
HSPG2-212ENST00000493940 CEP85Q6P2H3 762 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 TBC1D9Q6ZT07 1266 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 SLC10A4Q96EP9 437 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 WNK4Q96J92 1243 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 FAM198AQ9UFP1 575 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 DOCK2Q92608 1830 aa15.61■□□□□ 0.09
HSPG2-212ENST00000493940 SEMA3EO15041 775 aa15.6■□□□□ 0.09
HSPG2-212ENST00000493940 PPP1R12BO60237 982 aaPredicted RBP15.6■□□□□ 0.09
HSPG2-212ENST00000493940 LDHBP07195 334 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms