RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ABI1Q8IZP0 508 aa8.74□□□□□ -1.01
SMC4-223ENST00000493695 SHISA5Q8N114 240 aa8.74□□□□□ -1.01
SMC4-223ENST00000493695 LRRC4CQ9HCJ2 640 aa8.74□□□□□ -1.01
SMC4-223ENST00000493695 A0A096LPE4 126 aa8.73□□□□□ -1.01
SMC4-223ENST00000493695 A0A1W2PPZ6 126 aa8.73□□□□□ -1.01
SMC4-223ENST00000493695 EIF4EBP3O60516 100 aaPredicted RBP8.73□□□□□ -1.01
SMC4-223ENST00000493695 MAOBP27338 520 aa8.73□□□□□ -1.01
SMC4-223ENST00000493695 C2CD4AQ8NCU7 369 aaPredicted RBP8.73□□□□□ -1.01
SMC4-223ENST00000493695 FMNL2Q96PY5 1086 aa8.73□□□□□ -1.01
SMC4-223ENST00000493695 LIN7BQ9HAP6 207 aa8.73□□□□□ -1.01
SMC4-223ENST00000493695 AP4E1Q9UPM8 1137 aa8.73□□□□□ -1.01
SMC4-223ENST00000493695 CYP11A1P05108 521 aa8.72□□□□□ -1.01
SMC4-223ENST00000493695 POU4F3Q15319 338 aa8.72□□□□□ -1.01
SMC4-223ENST00000493695 DUSP27Q5VZP5 1158 aa8.72□□□□□ -1.01
SMC4-223ENST00000493695 CLEC4MQ9H2X3 399 aaPredicted RBP8.72□□□□□ -1.01
SMC4-223ENST00000493695 CCDC39Q9UFE4 941 aa8.72□□□□□ -1.01
SMC4-223ENST00000493695 PPP1R15AO75807 674 aaPredicted RBP8.71□□□□□ -1.02
SMC4-223ENST00000493695 NFICP08651 508 aa8.71□□□□□ -1.02
SMC4-223ENST00000493695 ADH5P11766 374 aa8.71□□□□□ -1.02
SMC4-223ENST00000493695 NPR3P17342 541 aa8.71□□□□□ -1.02
SMC4-223ENST00000493695 ADMP35318 185 aa8.71□□□□□ -1.02
SMC4-223ENST00000493695 SPRED3Q2MJR0 410 aa8.71□□□□□ -1.02
SMC4-223ENST00000493695 DDX54Q8TDD1 881 aaKnown RBP8.71□□□□□ -1.02
SMC4-223ENST00000493695 CORO1BQ9BR76 489 aa8.71□□□□□ -1.02
SMC4-223ENST00000493695 ADGRE2Q9UHX3 823 aa8.71□□□□□ -1.02
SMC4-223ENST00000493695 FAM170BA6NMN3 283 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 MAP7Q14244 749 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 CPSF6Q16630 551 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■□□□□ 10
SMC4-223ENST00000493695 HP1BP3Q5SSJ5 553 aaPredicted RBP8.7□□□□□ -1.02
SMC4-223ENST00000493695 ZAR1Q86SH2 424 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 GJD3Q8N144 294 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 LGR6Q9HBX8 967 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 PRKAG2Q9UGJ0 569 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 BRPF3Q9ULD4 1205 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 ACTL7BQ9Y614 415 aa8.7□□□□□ -1.02
SMC4-223ENST00000493695 A0A1W2PP55 124 aa8.69□□□□□ -1.02
SMC4-223ENST00000493695 GRIA4P48058 902 aa8.69□□□□□ -1.02
SMC4-223ENST00000493695 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
SMC4-223ENST00000493695 FLCNQ8NFG4 579 aa8.69□□□□□ -1.02
SMC4-223ENST00000493695 FBXL18Q96ME1 805 aa8.69□□□□□ -1.02
SMC4-223ENST00000493695 ZFYVE1Q9HBF4 777 aa8.69□□□□□ -1.02
SMC4-223ENST00000493695 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
SMC4-223ENST00000493695 ZNF423Q2M1K9 1284 aa8.68□□□□□ -1.02
SMC4-223ENST00000493695 VSIG10LQ86VR7 867 aa8.68□□□□□ -1.02
SMC4-223ENST00000493695 EHD4Q9H223 541 aa8.68□□□□□ -1.02
SMC4-223ENST00000493695 BSDC1Q9NW68 430 aaPredicted RBP8.68□□□□□ -1.02
SMC4-223ENST00000493695 H3BRB1 525 aa8.67□□□□□ -1.02
SMC4-223ENST00000493695 ASPAP45381 313 aa8.67□□□□□ -1.02
SMC4-223ENST00000493695 CCNJLQ8IV13 435 aa8.67□□□□□ -1.02
SMC4-223ENST00000493695 GLYCTKQ8IVS8 523 aa8.67□□□□□ -1.02
SMC4-223ENST00000493695 TUT1Q9H6E5 874 aaKnown RBP8.67□□□□□ -1.02
SMC4-223ENST00000493695 DAGLAQ9Y4D2 1042 aa8.67□□□□□ -1.02
SMC4-223ENST00000493695 NEFLP07196 543 aa8.66□□□□□ -1.02
SMC4-223ENST00000493695 CTSBP07858 339 aa8.66□□□□□ -1.02
SMC4-223ENST00000493695 USPL1Q5W0Q7 1092 aa8.66□□□□□ -1.02
SMC4-223ENST00000493695 PHLDB3Q6NSJ2 640 aa8.66□□□□□ -1.02
SMC4-223ENST00000493695 GALNT12Q8IXK2 581 aa8.66□□□□□ -1.02
SMC4-223ENST00000493695 TMC1Q8TDI8 760 aa8.66□□□□□ -1.02
SMC4-223ENST00000493695 FAM105AQ9NUU6 356 aa8.66□□□□□ -1.02
SMC4-223ENST00000493695 ECEL1O95672 775 aa8.65□□□□□ -1.02
SMC4-223ENST00000493695 CYP27A1Q02318 531 aa8.65□□□□□ -1.02
SMC4-223ENST00000493695 ZNF765Q7L2R6 523 aa8.65□□□□□ -1.02
SMC4-223ENST00000493695 EZH1Q92800 747 aaPredicted RBP8.65□□□□□ -1.02
SMC4-223ENST00000493695 SEMA6CQ9H3T2 930 aa8.65□□□□□ -1.02
SMC4-223ENST00000493695 NDUFB5O43674 189 aa8.64□□□□□ -1.03
SMC4-223ENST00000493695 TCF12Q99081 682 aa8.64□□□□□ -1.03
SMC4-223ENST00000493695 KRTAP9-9Q9BYP9 154 aa8.64□□□□□ -1.03
SMC4-223ENST00000493695 KRTAP9-4Q9BYQ2 154 aa8.64□□□□□ -1.03
SMC4-223ENST00000493695 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.63□□□□□ -1.03
SMC4-223ENST00000493695 NRSN2Q9GZP1 204 aa8.63□□□□□ -1.03
SMC4-223ENST00000493695 NPHS2Q9NP85 383 aa8.63□□□□□ -1.03
SMC4-223ENST00000493695 ZC3H7BQ9UGR2 993 aaKnown RBP8.63□□□□□ -1.03
SMC4-223ENST00000493695 GADD45BO75293 160 aaPredicted RBP8.62□□□□□ -1.03
SMC4-223ENST00000493695 PRNPP04156 253 aa8.62□□□□□ -1.03
SMC4-223ENST00000493695 ZNF157P51786 506 aaPredicted RBP8.62□□□□□ -1.03
SMC4-223ENST00000493695 ORC1Q13415 861 aa8.62□□□□□ -1.03
SMC4-223ENST00000493695 B4GALNT3Q6L9W6 998 aa8.62□□□□□ -1.03
SMC4-223ENST00000493695 AGBL5Q8NDL9 886 aa8.62□□□□□ -1.03
SMC4-223ENST00000493695 ASIC4Q96FT7 647 aa8.62□□□□□ -1.03
SMC4-223ENST00000493695 ZC3H12CQ9C0D7 883 aaKnown RBP8.62□□□□□ -1.03
SMC4-223ENST00000493695 ICMTO60725 284 aa8.61□□□□□ -1.03
SMC4-223ENST00000493695 AOC2O75106 756 aa8.61□□□□□ -1.03
SMC4-223ENST00000493695 CPNE3O75131 537 aaKnown RBP8.61□□□□□ -1.03
SMC4-223ENST00000493695 SERPINB4P48594 390 aa8.61□□□□□ -1.03
SMC4-223ENST00000493695 TRIM56Q9BRZ2 755 aaKnown RBP8.61□□□□□ -1.03
SMC4-223ENST00000493695 PIDD1Q9HB75 910 aa8.61□□□□□ -1.03
SMC4-223ENST00000493695 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
SMC4-223ENST00000493695 B3GALT4O96024 378 aa8.6□□□□□ -1.03
SMC4-223ENST00000493695 PDE3BQ13370 1112 aa8.6□□□□□ -1.03
SMC4-223ENST00000493695 GATA6Q92908 595 aa8.6□□□□□ -1.03
SMC4-223ENST00000493695 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
SMC4-223ENST00000493695 ACSS3Q9H6R3 686 aa8.6□□□□□ -1.03
SMC4-223ENST00000493695 DYNC1LI2O43237 492 aaPredicted RBP8.59□□□□□ -1.03
SMC4-223ENST00000493695 SLC5A6Q9Y289 635 aa8.59□□□□□ -1.03
SMC4-223ENST00000493695 LIG1P18858 919 aa8.58□□□□□ -1.04
SMC4-223ENST00000493695 AP3B2Q13367 1082 aa8.58□□□□□ -1.04
SMC4-223ENST00000493695 PLCL1Q15111 1095 aa8.58□□□□□ -1.04
SMC4-223ENST00000493695 CYP27C1Q4G0S4 372 aa8.58□□□□□ -1.04
SMC4-223ENST00000493695 KIAA0319Q5VV43 1072 aa8.58□□□□□ -1.04
SMC4-223ENST00000493695 OGFOD2Q6N063 350 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms