RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 MTMR14Q8NCE2 650 aa12.18□□□□□ -0.46
PRPF3-206ENST00000493553 KCTD15Q96SI1 283 aaPredicted RBP12.18□□□□□ -0.46
PRPF3-206ENST00000493553 MYD88Q99836 296 aa12.18□□□□□ -0.46
PRPF3-206ENST00000493553 ZFAND3Q9H8U3 227 aa12.18□□□□□ -0.46
PRPF3-206ENST00000493553 ROBO1Q9Y6N7 1651 aa12.18□□□□□ -0.46
PRPF3-206ENST00000493553 PRAMEF22A3QJZ6 481 aa12.17□□□□□ -0.46
PRPF3-206ENST00000493553 IGKV5-2P06315 115 aa12.17□□□□□ -0.46
PRPF3-206ENST00000493553 CWF19L2Q2TBE0 894 aaKnown RBP12.17□□□□□ -0.46
PRPF3-206ENST00000493553 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
PRPF3-206ENST00000493553 KIF6Q6ZMV9 814 aa12.17□□□□□ -0.46
PRPF3-206ENST00000493553 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
PRPF3-206ENST00000493553 ATG3Q9NT62 314 aa12.17□□□□□ -0.46
PRPF3-206ENST00000493553 ECHDC1Q9NTX5 307 aa12.17□□□□□ -0.46
PRPF3-206ENST00000493553 CWC25Q9NXE8 425 aaPredicted RBP12.17□□□□□ -0.46
PRPF3-206ENST00000493553 LAMB4A4D0S4 1761 aa12.16□□□□□ -0.46
PRPF3-206ENST00000493553 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
PRPF3-206ENST00000493553 MCM2P49736 904 aa12.16□□□□□ -0.46
PRPF3-206ENST00000493553 RABL6Q3YEC7 729 aaPredicted RBP12.16□□□□□ -0.46
PRPF3-206ENST00000493553 OTUD7AQ8TE49 926 aaPredicted RBP12.16□□□□□ -0.46
PRPF3-206ENST00000493553 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
PRPF3-206ENST00000493553 CHMP5Q9NZZ3 219 aa12.16□□□□□ -0.46
PRPF3-206ENST00000493553 A0A087WZG4 1122 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 ZBBXA8MT70 800 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 H7C1W4 665 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 SUCLG2Q96I99 432 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 BICC1Q9H694 974 aaKnown RBP12.15□□□□□ -0.46
PRPF3-206ENST00000493553 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 KCPQ6ZWJ8 1503 aa12.15□□□□□ -0.46
PRPF3-206ENST00000493553 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 BCL9O00512 1426 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 PTCD1O75127 700 aaKnown RBP12.14□□□□□ -0.47
PRPF3-206ENST00000493553 PTMSP20962 102 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 CHMLP26374 656 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 SCARF1Q14162 830 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 DDB1Q16531 1140 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 PIGBQ92521 554 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
PRPF3-206ENST00000493553 IL1RAPL2Q9NP60 686 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 GPR108Q9NPR9 543 aa12.14□□□□□ -0.47
PRPF3-206ENST00000493553 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 PAPPAQ13219 1627 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 HSP90AA1P07900 732 aaKnown RBP12.13□□□□□ -0.47
PRPF3-206ENST00000493553 DHX9Q08211 1270 aaKnown RBP12.13□□□□□ -0.47
PRPF3-206ENST00000493553 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
PRPF3-206ENST00000493553 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 DZIP3Q86Y13 1208 aaKnown RBP12.13□□□□□ -0.47
PRPF3-206ENST00000493553 NBPF15Q8N660 670 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 RILPL2Q969X0 211 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
PRPF3-206ENST00000493553 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
PRPF3-206ENST00000493553 K7ELQ4 463 aaPredicted RBP12.12□□□□□ -0.47
PRPF3-206ENST00000493553 TCIRG1Q13488 830 aa12.12□□□□□ -0.47
PRPF3-206ENST00000493553 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
PRPF3-206ENST00000493553 PPP1R26Q5T8A7 1209 aaPredicted RBP12.12□□□□□ -0.47
PRPF3-206ENST00000493553 UBE3BQ7Z3V4 1068 aa12.12□□□□□ -0.47
PRPF3-206ENST00000493553 MEIOBQ8N635 442 aa12.12□□□□□ -0.47
PRPF3-206ENST00000493553 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
PRPF3-206ENST00000493553 ZFP42Q96MM3 310 aa12.12□□□□□ -0.47
PRPF3-206ENST00000493553 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
PRPF3-206ENST00000493553 SPATA31A5Q5VU36 1347 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 SPATA31A7Q8IWB4 1347 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 C5P01031 1676 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 CIAO1O76071 339 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 A1BGP04217 495 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 FBXO45P0C2W1 286 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 AACSQ86V21 672 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 PI4K2BQ8TCG2 481 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 ISCA1Q9BUE6 129 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 CWC22Q9HCG8 908 aaKnown RBP12.11□□□□□ -0.47
PRPF3-206ENST00000493553 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 RAD50Q92878 1312 aa12.11□□□□□ -0.47
PRPF3-206ENST00000493553 RFX7Q2KHR2 1363 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 JCADQ9P266 1359 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 GPR37L1O60883 481 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 PCCAP05165 728 aaPredicted RBP12.1□□□□□ -0.47
PRPF3-206ENST00000493553 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
PRPF3-206ENST00000493553 IL6STP40189 918 aaPredicted RBP12.1□□□□□ -0.47
PRPF3-206ENST00000493553 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
PRPF3-206ENST00000493553 CASP7P55210 303 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 LRRFIP1Q32MZ4 808 aaKnown RBP12.1□□□□□ -0.47
PRPF3-206ENST00000493553 PLA2G12BQ9BX93 195 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 ANTXR1Q9H6X2 564 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
PRPF3-206ENST00000493553 MAP3K15Q6ZN16 1313 aa12.1□□□□□ -0.47
PRPF3-206ENST00000493553 PHLPP1O60346 1717 aa12.09□□□□□ -0.47
PRPF3-206ENST00000493553 UBAP1LF5GYI3 381 aa12.09□□□□□ -0.47
PRPF3-206ENST00000493553 PURBQ96QR8 312 aaKnown RBP12.09□□□□□ -0.47
PRPF3-206ENST00000493553 KIF2CQ99661 725 aa12.09□□□□□ -0.47
PRPF3-206ENST00000493553 ASAP1Q9ULH1 1129 aa12.09□□□□□ -0.47
PRPF3-206ENST00000493553 GLI3P10071 1580 aa12.09□□□□□ -0.47
PRPF3-206ENST00000493553 SPATA31A6Q5VVP1 1343 aa12.09□□□□□ -0.47
PRPF3-206ENST00000493553 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
PRPF3-206ENST00000493553 SLIT2O94813 1529 aa12.08□□□□□ -0.48
PRPF3-206ENST00000493553 ESPNB1AK53 854 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms