RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
SNED1-212ENST00000493358 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
SNED1-212ENST00000493358 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
SNED1-212ENST00000493358 SPRYD7Q5W111 196 aa16.69■□□□□ 0.26
SNED1-212ENST00000493358 LPIN2Q92539 896 aa16.69■□□□□ 0.26
SNED1-212ENST00000493358 TDRD3Q9H7E2 651 aaKnown RBP16.69■□□□□ 0.26
SNED1-212ENST00000493358 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
SNED1-212ENST00000493358 ALDH1A1P00352 501 aa16.68■□□□□ 0.26
SNED1-212ENST00000493358 ZBTB48P10074 688 aaPredicted RBP16.68■□□□□ 0.26
SNED1-212ENST00000493358 TM4SF4P48230 202 aa16.68■□□□□ 0.26
SNED1-212ENST00000493358 BCAMP50895 628 aa16.68■□□□□ 0.26
SNED1-212ENST00000493358 NBPF12Q5TAG4 269 aaPredicted RBP16.68■□□□□ 0.26
SNED1-212ENST00000493358 CTU1Q7Z7A3 348 aaKnown RBP16.68■□□□□ 0.26
SNED1-212ENST00000493358 SIL1Q9H173 461 aa16.68■□□□□ 0.26
SNED1-212ENST00000493358 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
SNED1-212ENST00000493358 CEP126Q9P2H0 1117 aa16.68■□□□□ 0.26
SNED1-212ENST00000493358 FZD1Q9UP38 647 aa16.68■□□□□ 0.26
SNED1-212ENST00000493358 SUGT1Q9Y2Z0 365 aa16.68■□□□□ 0.26
SNED1-212ENST00000493358 LRRFIP2Q9Y608 721 aaKnown RBP16.68■□□□□ 0.26
SNED1-212ENST00000493358 TCP10L2B9ZVM9 353 aa16.67■□□□□ 0.26
SNED1-212ENST00000493358 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
SNED1-212ENST00000493358 RFX5P48382 616 aaPredicted RBP16.67■□□□□ 0.26
SNED1-212ENST00000493358 RARSP54136 660 aaKnown RBP16.67■□□□□ 0.26
SNED1-212ENST00000493358 INHBEP58166 350 aa16.67■□□□□ 0.26
SNED1-212ENST00000493358 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
SNED1-212ENST00000493358 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
SNED1-212ENST00000493358 WDR66Q8TBY9 1149 aa16.67■□□□□ 0.26
SNED1-212ENST00000493358 CIAO1O76071 339 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 GNAI3P08754 354 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 FGFR2P21802 821 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 ARHGAP45Q92619 1136 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 AOX1Q06278 1338 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
SNED1-212ENST00000493358 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
SNED1-212ENST00000493358 OTUD7BQ6GQQ9 843 aa16.65■□□□□ 0.26
SNED1-212ENST00000493358 HOOK2Q96ED9 719 aa16.65■□□□□ 0.26
SNED1-212ENST00000493358 CLMNQ96JQ2 1002 aa16.65■□□□□ 0.26
SNED1-212ENST00000493358 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
SNED1-212ENST00000493358 PKN2Q16513 984 aaKnown RBP16.64■□□□□ 0.25
SNED1-212ENST00000493358 ATG9AQ7Z3C6 839 aa16.64■□□□□ 0.25
SNED1-212ENST00000493358 ZNF296Q8WUU4 475 aaPredicted RBP16.64■□□□□ 0.25
SNED1-212ENST00000493358 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
SNED1-212ENST00000493358 CSADQ9Y600 493 aa16.64■□□□□ 0.25
SNED1-212ENST00000493358 GPR25O00155 361 aa16.63■□□□□ 0.25
SNED1-212ENST00000493358 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
SNED1-212ENST00000493358 GRIK5Q16478 980 aa16.63■□□□□ 0.25
SNED1-212ENST00000493358 NOM1Q5C9Z4 860 aaKnown RBP16.63■□□□□ 0.25
SNED1-212ENST00000493358 MEIS3Q99687 375 aa16.63■□□□□ 0.25
SNED1-212ENST00000493358 MRIQ9BWK5 157 aa16.63■□□□□ 0.25
SNED1-212ENST00000493358 TMEM39BQ9GZU3 492 aa16.63■□□□□ 0.25
SNED1-212ENST00000493358 PDE4DIPQ5VU43 2346 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 FKTNO75072 461 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 INTS3Q68E01 1043 aaKnown RBP16.62■□□□□ 0.25
SNED1-212ENST00000493358 HHIPL2Q6UWX4 724 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 IFNL1Q8IU54 200 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 FRAT1Q92837 279 aaPredicted RBP16.62■□□□□ 0.25
SNED1-212ENST00000493358 CFHR5Q9BXR6 569 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 COPRSQ9NQ92 184 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 DENND2AQ9ULE3 1009 aa16.62■□□□□ 0.25
SNED1-212ENST00000493358 SEMA3EO15041 775 aa16.61■□□□□ 0.25
SNED1-212ENST00000493358 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
SNED1-212ENST00000493358 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
SNED1-212ENST00000493358 FKBP1CQ5VVH2 108 aa16.61■□□□□ 0.25
SNED1-212ENST00000493358 DCAF15Q66K64 600 aa16.61■□□□□ 0.25
SNED1-212ENST00000493358 FAM83AQ86UY5 434 aa16.61■□□□□ 0.25
SNED1-212ENST00000493358 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
SNED1-212ENST00000493358 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
SNED1-212ENST00000493358 RPAP1Q9BWH6 1393 aaPredicted RBP16.61■□□□□ 0.25
SNED1-212ENST00000493358 CACNB3P54284 484 aa16.6■□□□□ 0.25
SNED1-212ENST00000493358 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
SNED1-212ENST00000493358 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
SNED1-212ENST00000493358 TEPSINQ96N21 525 aa16.6■□□□□ 0.25
SNED1-212ENST00000493358 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
SNED1-212ENST00000493358 HNRNPUQ00839 825 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNED1-212ENST00000493358 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
SNED1-212ENST00000493358 WDHD1O75717 1129 aaPredicted RBP16.58■□□□□ 0.24
SNED1-212ENST00000493358 GNAI2P04899 355 aa16.58■□□□□ 0.24
SNED1-212ENST00000493358 TRIM27P14373 513 aa16.58■□□□□ 0.24
SNED1-212ENST00000493358 RGS19P49795 217 aa16.58■□□□□ 0.24
SNED1-212ENST00000493358 VGLL4Q14135 290 aa16.58■□□□□ 0.24
SNED1-212ENST00000493358 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.24
SNED1-212ENST00000493358 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 IGF2BP3O00425 579 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNED1-212ENST00000493358 PHKA1P46020 1223 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 GTF2A2P52657 109 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 MVPQ14764 893 aaKnown RBP16.57■□□□□ 0.24
SNED1-212ENST00000493358 ZKSCAN2Q63HK3 967 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 FBXO46Q6PJ61 603 aaPredicted RBP16.57■□□□□ 0.24
SNED1-212ENST00000493358 DZIP1Q86YF9 867 aaKnown RBP16.57■□□□□ 0.24
SNED1-212ENST00000493358 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNED1-212ENST00000493358 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 OTUD5Q96G74 571 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 WRNIP1Q96S55 665 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 HPS5Q9UPZ3 1129 aa16.57■□□□□ 0.24
SNED1-212ENST00000493358 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms