RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 C9orf78Q9NZ63 289 aaPredicted RBP27.18■■□□□ 1.94
PFDN4-205ENST00000493356 BRCA2P51587 3418 aa27.18■■□□□ 1.94
PFDN4-205ENST00000493356 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.17■■□□□ 1.94
PFDN4-205ENST00000493356 DZIP1LQ8IYY4 767 aaKnown RBP27.17■■□□□ 1.94
PFDN4-205ENST00000493356 PUS3Q9BZE2 481 aaKnown RBP27.16■■□□□ 1.94
PFDN4-205ENST00000493356 SPINK5Q9NQ38 1064 aaPredicted RBP27.16■■□□□ 1.94
PFDN4-205ENST00000493356 ALDH1L1O75891 902 aa27.15■■□□□ 1.94
PFDN4-205ENST00000493356 CNKSR2Q8WXI2 1034 aa27.15■■□□□ 1.94
PFDN4-205ENST00000493356 MRS2Q9HD23 443 aa27.15■■□□□ 1.94
PFDN4-205ENST00000493356 TCP10L2B9ZVM9 353 aa27.14■■□□□ 1.94
PFDN4-205ENST00000493356 CRKP46108 304 aa27.14■■□□□ 1.94
PFDN4-205ENST00000493356 BRI3BPQ8WY22 251 aa27.14■■□□□ 1.94
PFDN4-205ENST00000493356 TMEM39BQ9GZU3 492 aa27.14■■□□□ 1.94
PFDN4-205ENST00000493356 VGLL4Q14135 290 aa27.13■■□□□ 1.93
PFDN4-205ENST00000493356 SLC4A10Q6U841 1118 aa27.13■■□□□ 1.93
PFDN4-205ENST00000493356 KAZALD1Q96I82 304 aa27.13■■□□□ 1.93
PFDN4-205ENST00000493356 SUCLG2Q96I99 432 aa27.13■■□□□ 1.93
PFDN4-205ENST00000493356 SRCIN1Q9C0H9 1055 aa27.13■■□□□ 1.93
PFDN4-205ENST00000493356 TNNI2P48788 182 aa27.12■■□□□ 1.93
PFDN4-205ENST00000493356 GRIK5Q16478 980 aa27.12■■□□□ 1.93
PFDN4-205ENST00000493356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.12■■□□□ 1.93
PFDN4-205ENST00000493356 RIPOR2Q9Y4F9 1068 aa27.12■■□□□ 1.93
PFDN4-205ENST00000493356 CCL15-CCL14A0A0B4J2E2 113 aa27.11■■□□□ 1.93
PFDN4-205ENST00000493356 EN2P19622 333 aaPredicted RBP27.11■■□□□ 1.93
PFDN4-205ENST00000493356 GTF2A2P52657 109 aa27.11■■□□□ 1.93
PFDN4-205ENST00000493356 MAP3K9P80192 1104 aa27.11■■□□□ 1.93
PFDN4-205ENST00000493356 CCL15Q16663 113 aa27.11■■□□□ 1.93
PFDN4-205ENST00000493356 MROH5Q6ZUA9 1318 aa27.11■■□□□ 1.93
PFDN4-205ENST00000493356 TAF1CQ15572 869 aaPredicted RBP27.1■■□□□ 1.93
PFDN4-205ENST00000493356 FBXO33Q7Z6M2 555 aa27.1■■□□□ 1.93
PFDN4-205ENST00000493356 CSADQ9Y600 493 aa27.1■■□□□ 1.93
PFDN4-205ENST00000493356 HABP4Q5JVS0 413 aaKnown RBP27.09■■□□□ 1.93
PFDN4-205ENST00000493356 FAM43AQ8N2R8 423 aa27.09■■□□□ 1.93
PFDN4-205ENST00000493356 OTUD5Q96G74 571 aa27.09■■□□□ 1.93
PFDN4-205ENST00000493356 ZFYVE28Q9HCC9 887 aa27.09■■□□□ 1.93
PFDN4-205ENST00000493356 IQSEC3Q9UPP2 1182 aaPredicted RBP27.09■■□□□ 1.93
PFDN4-205ENST00000493356 NBPF7P0C2Y1 421 aaPredicted RBP27.08■■□□□ 1.93
PFDN4-205ENST00000493356 HDLBPQ00341 1268 aaKnown RBP27.08■■□□□ 1.93
PFDN4-205ENST00000493356 VPS37DQ86XT2 251 aa27.08■■□□□ 1.93
PFDN4-205ENST00000493356 ZNF333Q96JL9 665 aa27.08■■□□□ 1.93
PFDN4-205ENST00000493356 CHAF1AQ13111 956 aaPredicted RBP27.07■■□□□ 1.92
PFDN4-205ENST00000493356 ARHGEF6Q15052 776 aa27.07■■□□□ 1.92
PFDN4-205ENST00000493356 UTYO14607 1347 aa27.07■■□□□ 1.92
PFDN4-205ENST00000493356 SPDYE5A6NIY4 337 aa27.06■■□□□ 1.92
PFDN4-205ENST00000493356 CACNB3P54284 484 aa27.06■■□□□ 1.92
PFDN4-205ENST00000493356 TBC1D22AQ8WUA7 517 aa27.06■■□□□ 1.92
PFDN4-205ENST00000493356 TMEM106CQ9BVX2 250 aa27.06■■□□□ 1.92
PFDN4-205ENST00000493356 BICC1Q9H694 974 aaKnown RBP27.06■■□□□ 1.92
PFDN4-205ENST00000493356 PTCH2Q9Y6C5 1203 aa27.06■■□□□ 1.92
PFDN4-205ENST00000493356 RABL6Q3YEC7 729 aaPredicted RBP27.05■■□□□ 1.92
PFDN4-205ENST00000493356 SLC9C1Q4G0N8 1177 aa27.05■■□□□ 1.92
PFDN4-205ENST00000493356 LRRC24Q50LG9 513 aa27.05■■□□□ 1.92
PFDN4-205ENST00000493356 TEKT1Q969V4 418 aa27.05■■□□□ 1.92
PFDN4-205ENST00000493356 SNCAIPQ9Y6H5 919 aa27.05■■□□□ 1.92
PFDN4-205ENST00000493356 FRAT2O75474 233 aaPredicted RBP27.04■■□□□ 1.92
PFDN4-205ENST00000493356 CAVIN4Q5BKX8 364 aa27.04■■□□□ 1.92
PFDN4-205ENST00000493356 METTL24Q5JXM2 366 aa27.04■■□□□ 1.92
PFDN4-205ENST00000493356 VGLL2Q8N8G2 317 aa27.04■■□□□ 1.92
PFDN4-205ENST00000493356 ZSWIM8A7E2V4 1837 aa27.04■■□□□ 1.92
PFDN4-205ENST00000493356 NBPF11Q86T75 865 aa27.03■■□□□ 1.92
PFDN4-205ENST00000493356 ERO1BQ86YB8 467 aa27.03■■□□□ 1.92
PFDN4-205ENST00000493356 ZDHHC15Q96MV8 337 aa27.03■■□□□ 1.92
PFDN4-205ENST00000493356 FAM83AQ86UY5 434 aa27.02■■□□□ 1.92
PFDN4-205ENST00000493356 ANKRD44Q8N8A2 993 aa27.02■■□□□ 1.92
PFDN4-205ENST00000493356 WRNIP1Q96S55 665 aa27.02■■□□□ 1.92
PFDN4-205ENST00000493356 TLR2O60603 784 aa27.01■■□□□ 1.91
PFDN4-205ENST00000493356 PDE8BO95263 885 aa27.01■■□□□ 1.91
PFDN4-205ENST00000493356 CETPP11597 493 aa27.01■■□□□ 1.91
PFDN4-205ENST00000493356 ZKSCAN4Q969J2 545 aaPredicted RBP27.01■■□□□ 1.91
PFDN4-205ENST00000493356 MRIQ9BWK5 157 aa27.01■■□□□ 1.91
PFDN4-205ENST00000493356 ZCCHC17Q9NP64 241 aaKnown RBP27.01■■□□□ 1.91
PFDN4-205ENST00000493356 TMOD2Q9NZR1 351 aa27.01■■□□□ 1.91
PFDN4-205ENST00000493356 WDHD1O75717 1129 aaPredicted RBP27■■□□□ 1.91
PFDN4-205ENST00000493356 BCAMP50895 628 aa27■■□□□ 1.91
PFDN4-205ENST00000493356 FKBP1CQ5VVH2 108 aa27■■□□□ 1.91
PFDN4-205ENST00000493356 APOBEC3HQ6NTF7 200 aaKnown RBP27■■□□□ 1.91
PFDN4-205ENST00000493356 CEP290O15078 2479 aa27■■□□□ 1.91
PFDN4-205ENST00000493356 BTBD19C9JJ37 291 aa26.99■■□□□ 1.91
PFDN4-205ENST00000493356 IRF6O14896 467 aa26.99■■□□□ 1.91
PFDN4-205ENST00000493356 HOOK2Q96ED9 719 aa26.99■■□□□ 1.91
PFDN4-205ENST00000493356 ARHGAP39Q9C0H5 1083 aa26.99■■□□□ 1.91
PFDN4-205ENST00000493356 MAST3O60307 1309 aa26.98■■□□□ 1.91
PFDN4-205ENST00000493356 LACTBP83111 547 aaPredicted RBP26.98■■□□□ 1.91
PFDN4-205ENST00000493356 PPIL2Q13356 520 aa26.98■■□□□ 1.91
PFDN4-205ENST00000493356 SNAPC2Q13487 334 aa26.98■■□□□ 1.91
PFDN4-205ENST00000493356 SLC4A8Q2Y0W8 1093 aa26.98■■□□□ 1.91
PFDN4-205ENST00000493356 SUGT1Q9Y2Z0 365 aa26.98■■□□□ 1.91
PFDN4-205ENST00000493356 RPAP1Q9BWH6 1393 aaPredicted RBP26.97■■□□□ 1.91
PFDN4-205ENST00000493356 ANP32CO43423 234 aa26.97■■□□□ 1.91
PFDN4-205ENST00000493356 KLHDC4Q8TBB5 520 aa26.97■■□□□ 1.91
PFDN4-205ENST00000493356 MYH13Q9UKX3 1938 aa26.96■■□□□ 1.91
PFDN4-205ENST00000493356 KIF16BQ96L93 1317 aa26.96■■□□□ 1.91
PFDN4-205ENST00000493356 MYCP01106 439 aaPredicted RBP26.96■■□□□ 1.91
PFDN4-205ENST00000493356 KIF22Q14807 665 aa26.96■■□□□ 1.91
PFDN4-205ENST00000493356 SH3TC2Q8TF17 1288 aa26.96■■□□□ 1.91
PFDN4-205ENST00000493356 FGFR2P21802 821 aa26.95■■□□□ 1.9
PFDN4-205ENST00000493356 DCAF15Q66K64 600 aa26.95■■□□□ 1.9
PFDN4-205ENST00000493356 HHIPL2Q6UWX4 724 aa26.95■■□□□ 1.9
PFDN4-205ENST00000493356 PUM3Q15397 648 aaKnown RBP26.94■■□□□ 1.9
PFDN4-205ENST00000493356 GNRH1P01148 92 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms