RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 SERPINA10Q9UK55 444 aa20.58■□□□□ 0.89
RER1-208ENST00000493207 PCDHAC2Q9Y5I4 1007 aa20.58■□□□□ 0.89
RER1-208ENST00000493207 MYH2Q9UKX2 1941 aa20.57■□□□□ 0.88
RER1-208ENST00000493207 CYP2E1P05181 493 aaPredicted RBP20.57■□□□□ 0.88
RER1-208ENST00000493207 NBPF9Q3BBW0 867 aa20.57■□□□□ 0.88
RER1-208ENST00000493207 MAP1SQ66K74 1059 aaPredicted RBP20.57■□□□□ 0.88
RER1-208ENST00000493207 SPTY2D1Q68D10 685 aaPredicted RBP20.57■□□□□ 0.88
RER1-208ENST00000493207 GPATCH3Q96I76 525 aa20.57■□□□□ 0.88
RER1-208ENST00000493207 MAST2Q6P0Q8 1798 aa20.57■□□□□ 0.88
RER1-208ENST00000493207 ASTN2O75129 1339 aaPredicted RBP20.56■□□□□ 0.88
RER1-208ENST00000493207 POLR2AP24928 1970 aaKnown RBP20.56■□□□□ 0.88
RER1-208ENST00000493207 DOCK2Q92608 1830 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 WNT10BO00744 389 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 ATP5JP18859 108 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 CRKP46108 304 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 ERICH6Q7L0X2 663 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 DZIP1Q86YF9 867 aaKnown RBP20.56■□□□□ 0.88
RER1-208ENST00000493207 MTMR14Q8NCE2 650 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 OTUD7AQ8TE49 926 aaPredicted RBP20.56■□□□□ 0.88
RER1-208ENST00000493207 ZC3H15Q8WU90 426 aaKnown RBP20.56■□□□□ 0.88
RER1-208ENST00000493207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.56■□□□□ 0.88
RER1-208ENST00000493207 TEKT1Q969V4 418 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 DNAJC2Q99543 621 aaKnown RBP20.56■□□□□ 0.88
RER1-208ENST00000493207 LNPKQ9C0E8 428 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 ECHDC1Q9NTX5 307 aa20.56■□□□□ 0.88
RER1-208ENST00000493207 NUCB1Q02818 461 aa20.55■□□□□ 0.88
RER1-208ENST00000493207 DIXDC1Q155Q3 683 aa20.55■□□□□ 0.88
RER1-208ENST00000493207 ZBED3Q96IU2 234 aaPredicted RBP20.55■□□□□ 0.88
RER1-208ENST00000493207 BOLA2Q9H3K6 86 aa20.55■□□□□ 0.88
RER1-208ENST00000493207 GGA3Q9NZ52 723 aa20.55■□□□□ 0.88
RER1-208ENST00000493207 RAI14Q9P0K7 980 aa20.55■□□□□ 0.88
RER1-208ENST00000493207 LRP2BPQ9P2M1 347 aa20.55■□□□□ 0.88
RER1-208ENST00000493207 PGAP2Q9UHJ9 254 aa20.55■□□□□ 0.88
RER1-208ENST00000493207 SPDYE2BA6NHP3 402 aa20.54■□□□□ 0.88
RER1-208ENST00000493207 SPDYE6P0CI01 402 aa20.54■□□□□ 0.88
RER1-208ENST00000493207 HDLBPQ00341 1268 aaKnown RBP20.54■□□□□ 0.88
RER1-208ENST00000493207 FSTL1Q12841 308 aa20.54■□□□□ 0.88
RER1-208ENST00000493207 ANGEL2Q5VTE6 544 aaKnown RBP20.54■□□□□ 0.88
RER1-208ENST00000493207 CHD1LQ86WJ1 897 aa20.54■□□□□ 0.88
RER1-208ENST00000493207 PRMT6Q96LA8 375 aaPredicted RBP20.54■□□□□ 0.88
RER1-208ENST00000493207 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
RER1-208ENST00000493207 PIH1D3Q9NQM4 214 aaKnown RBP20.54■□□□□ 0.88
RER1-208ENST00000493207 MX1P20591 662 aa20.53■□□□□ 0.88
RER1-208ENST00000493207 MECOMQ03112 1051 aa20.53■□□□□ 0.88
RER1-208ENST00000493207 HHIPL2Q6UWX4 724 aa20.53■□□□□ 0.88
RER1-208ENST00000493207 CNTROBQ8N137 903 aa20.53■□□□□ 0.88
RER1-208ENST00000493207 DCPSQ96C86 337 aaKnown RBP20.53■□□□□ 0.88
RER1-208ENST00000493207 MRIQ9BWK5 157 aa20.53■□□□□ 0.88
RER1-208ENST00000493207 AOX1Q06278 1338 aa20.53■□□□□ 0.88
RER1-208ENST00000493207 GOLIM4O00461 696 aa20.52■□□□□ 0.88
RER1-208ENST00000493207 MYO1BO43795 1136 aa20.52■□□□□ 0.88
RER1-208ENST00000493207 ZDHHC15Q96MV8 337 aa20.52■□□□□ 0.88
RER1-208ENST00000493207 HAUS7Q99871 368 aa20.52■□□□□ 0.88
RER1-208ENST00000493207 TTC41PQ6P2S7 1318 aa20.52■□□□□ 0.87
RER1-208ENST00000493207 SALL3Q9BXA9 1300 aa20.52■□□□□ 0.87
RER1-208ENST00000493207 TTF1Q15361 905 aaPredicted RBP20.51■□□□□ 0.87
RER1-208ENST00000493207 ZNF384Q8TF68 577 aa20.51■□□□□ 0.87
RER1-208ENST00000493207 NSUN4Q96CB9 384 aaKnown RBP20.51■□□□□ 0.87
RER1-208ENST00000493207 EDC3Q96F86 508 aaKnown RBP20.51■□□□□ 0.87
RER1-208ENST00000493207 PAG1Q9NWQ8 432 aa20.51■□□□□ 0.87
RER1-208ENST00000493207 SCAF8Q9UPN6 1271 aaKnown RBP20.51■□□□□ 0.87
RER1-208ENST00000493207 DAGLAQ9Y4D2 1042 aa20.51■□□□□ 0.87
RER1-208ENST00000493207 CLRN2A0PK11 232 aa20.5■□□□□ 0.87
RER1-208ENST00000493207 IDH1O75874 414 aaKnown RBP20.5■□□□□ 0.87
RER1-208ENST00000493207 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
RER1-208ENST00000493207 KRT26Q7Z3Y9 468 aa20.5■□□□□ 0.87
RER1-208ENST00000493207 SLF2Q8IX21 1173 aa20.5■□□□□ 0.87
RER1-208ENST00000493207 GLIS2Q9BZE0 524 aaPredicted RBP20.5■□□□□ 0.87
RER1-208ENST00000493207 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
RER1-208ENST00000493207 PITPNM2Q9BZ72 1349 aa20.5■□□□□ 0.87
RER1-208ENST00000493207 ERC2O15083 957 aa20.49■□□□□ 0.87
RER1-208ENST00000493207 ITGBL1O95965 494 aaPredicted RBP20.49■□□□□ 0.87
RER1-208ENST00000493207 GSTO1P78417 241 aa20.49■□□□□ 0.87
RER1-208ENST00000493207 APOBEC3HQ6NTF7 200 aaKnown RBP20.49■□□□□ 0.87
RER1-208ENST00000493207 CDC37L1Q7L3B6 337 aa20.49■□□□□ 0.87
RER1-208ENST00000493207 USP48Q86UV5 1035 aa20.49■□□□□ 0.87
RER1-208ENST00000493207 PI4K2BQ8TCG2 481 aa20.49■□□□□ 0.87
RER1-208ENST00000493207 MROH7-TTC4A0A0A0MT08 1334 aa20.49■□□□□ 0.87
RER1-208ENST00000493207 MYH7P12883 1935 aa20.49■□□□□ 0.87
RER1-208ENST00000493207 ADM5C9JUS6 153 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 TRAF5O00463 557 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 PDE1AP54750 535 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 NAA16Q6N069 864 aaPredicted RBP20.48■□□□□ 0.87
RER1-208ENST00000493207 SULF1Q8IWU6 871 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 VEZTQ9HBM0 779 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 ZNF70Q9UC06 446 aaPredicted RBP20.48■□□□□ 0.87
RER1-208ENST00000493207 GAKO14976 1311 aa20.48■□□□□ 0.87
RER1-208ENST00000493207 TRPM7Q96QT4 1865 aa20.47■□□□□ 0.87
RER1-208ENST00000493207 GLRX3O76003 335 aaKnown RBP20.47■□□□□ 0.87
RER1-208ENST00000493207 MAP4K4O95819 1239 aaPredicted RBP20.47■□□□□ 0.87
RER1-208ENST00000493207 FMR1Q06787 632 aaKnown RBP eCLIP20.47■□□□□ 0.87
RER1-208ENST00000493207 MAP3K12Q12852 859 aa20.47■□□□□ 0.87
RER1-208ENST00000493207 DLK2Q6UY11 383 aa20.47■□□□□ 0.87
RER1-208ENST00000493207 APOBEC3FQ8IUX4 373 aaKnown RBP20.47■□□□□ 0.87
RER1-208ENST00000493207 FAM163AQ96GL9 167 aaPredicted RBP20.47■□□□□ 0.87
RER1-208ENST00000493207 STAP2Q9UGK3 403 aa20.47■□□□□ 0.87
RER1-208ENST00000493207 LDHCP07864 332 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms