RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 LPIN2Q92539 896 aa16.42■□□□□ 0.22
MSH6-208ENST00000493177 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
MSH6-208ENST00000493177 CAPNS2Q96L46 248 aa16.42■□□□□ 0.22
MSH6-208ENST00000493177 RGS3P49796 1198 aa16.41■□□□□ 0.22
MSH6-208ENST00000493177 RBM5P52756 815 aaKnown RBP eCLIP16.41■□□□□ 0.22
MSH6-208ENST00000493177 DLK2Q6UY11 383 aa16.41■□□□□ 0.22
MSH6-208ENST00000493177 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
MSH6-208ENST00000493177 GBA2Q9HCG7 927 aaPredicted RBP16.41■□□□□ 0.22
MSH6-208ENST00000493177 PITPNM2Q9BZ72 1349 aa16.41■□□□□ 0.22
MSH6-208ENST00000493177 IRS2Q9Y4H2 1338 aa16.41■□□□□ 0.22
MSH6-208ENST00000493177 PDE4AP27815 886 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 HUNKP57058 714 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 CHAF1AQ13111 956 aaPredicted RBP16.4■□□□□ 0.22
MSH6-208ENST00000493177 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 NBPF9Q3BBW0 867 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 SAPCD2Q86UD0 394 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
MSH6-208ENST00000493177 CDCA5Q96FF9 252 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 DBNDD2Q9BQY9 259 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
MSH6-208ENST00000493177 TLR7Q9NYK1 1049 aaKnown RBP16.4■□□□□ 0.22
MSH6-208ENST00000493177 IQSEC3Q9UPP2 1182 aaPredicted RBP16.4■□□□□ 0.22
MSH6-208ENST00000493177 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 WNT10BO00744 389 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 MYO1BO43795 1136 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 FGFR2P21802 821 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 ADORA1P30542 326 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 NF2P35240 595 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 MFSD14BQ5SR56 506 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 XAGE2Q96GT9 111 aa16.39■□□□□ 0.21
MSH6-208ENST00000493177 FAM84BQ96KN1 310 aaPredicted RBP16.39■□□□□ 0.21
MSH6-208ENST00000493177 SCAF8Q9UPN6 1271 aaKnown RBP16.39■□□□□ 0.21
MSH6-208ENST00000493177 MX1P20591 662 aa16.38■□□□□ 0.21
MSH6-208ENST00000493177 FKBP1AP62942 108 aaKnown RBP16.38■□□□□ 0.21
MSH6-208ENST00000493177 MAP2K1Q02750 393 aaPredicted RBP16.38■□□□□ 0.21
MSH6-208ENST00000493177 TTLL12Q14166 644 aaPredicted RBP16.38■□□□□ 0.21
MSH6-208ENST00000493177 APOBEC3FQ8IUX4 373 aaKnown RBP16.38■□□□□ 0.21
MSH6-208ENST00000493177 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
MSH6-208ENST00000493177 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
MSH6-208ENST00000493177 CCDC158Q5M9N0 1113 aa16.37■□□□□ 0.21
MSH6-208ENST00000493177 TTC39AQ5SRH9 613 aa16.37■□□□□ 0.21
MSH6-208ENST00000493177 CERS5Q8N5B7 392 aa16.37■□□□□ 0.21
MSH6-208ENST00000493177 TDRD7Q8NHU6 1098 aaKnown RBP16.37■□□□□ 0.21
MSH6-208ENST00000493177 THSD7BQ9C0I4 1608 aa16.37■□□□□ 0.21
MSH6-208ENST00000493177 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 AOC2O75106 756 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 TSHZ3Q63HK5 1081 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 PLEKHM2Q8IWE5 1019 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 HHIPL1Q96JK4 782 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 ECHDC1Q9NTX5 307 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 TTF2Q9UNY4 1162 aaKnown RBP16.36■□□□□ 0.21
MSH6-208ENST00000493177 FAM205AQ6ZU69 1335 aa16.36■□□□□ 0.21
MSH6-208ENST00000493177 BCAMP50895 628 aa16.35■□□□□ 0.21
MSH6-208ENST00000493177 PDE1AP54750 535 aa16.35■□□□□ 0.21
MSH6-208ENST00000493177 RGMBQ6NW40 437 aa16.35■□□□□ 0.21
MSH6-208ENST00000493177 TBC1D22AQ8WUA7 517 aa16.35■□□□□ 0.21
MSH6-208ENST00000493177 ERC2O15083 957 aa16.34■□□□□ 0.21
MSH6-208ENST00000493177 FOXN1O15353 648 aa16.34■□□□□ 0.21
MSH6-208ENST00000493177 CTCFP49711 727 aaPredicted RBP16.34■□□□□ 0.21
MSH6-208ENST00000493177 ZNF157P51786 506 aaPredicted RBP16.34■□□□□ 0.21
MSH6-208ENST00000493177 PRAMEF18Q5VWM3 479 aa16.34■□□□□ 0.21
MSH6-208ENST00000493177 CCDC102BQ68D86 513 aa16.34■□□□□ 0.21
MSH6-208ENST00000493177 FBXO33Q7Z6M2 555 aa16.34■□□□□ 0.21
MSH6-208ENST00000493177 GNL3LQ9NVN8 582 aaKnown RBP16.34■□□□□ 0.21
MSH6-208ENST00000493177 TTC41PQ6P2S7 1318 aa16.34■□□□□ 0.21
MSH6-208ENST00000493177 SALL3Q9BXA9 1300 aa16.34■□□□□ 0.21
MSH6-208ENST00000493177 CLRN2A0PK11 232 aa16.33■□□□□ 0.2
MSH6-208ENST00000493177 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
MSH6-208ENST00000493177 MAP2K2P36507 400 aa16.33■□□□□ 0.2
MSH6-208ENST00000493177 PHKA1P46020 1223 aa16.33■□□□□ 0.2
MSH6-208ENST00000493177 WBP1LQ9NX94 342 aa16.33■□□□□ 0.2
MSH6-208ENST00000493177 STAP2Q9UGK3 403 aa16.33■□□□□ 0.2
MSH6-208ENST00000493177 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.2
MSH6-208ENST00000493177 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
MSH6-208ENST00000493177 FKBP1BP68106 108 aa16.32■□□□□ 0.2
MSH6-208ENST00000493177 NOGQ13253 232 aa16.32■□□□□ 0.2
MSH6-208ENST00000493177 PRKG1Q13976 671 aa16.32■□□□□ 0.2
MSH6-208ENST00000493177 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
MSH6-208ENST00000493177 CCDC102AQ96A19 550 aa16.32■□□□□ 0.2
MSH6-208ENST00000493177 BOLA2Q9H3K6 86 aa16.32■□□□□ 0.2
MSH6-208ENST00000493177 MAST3O60307 1309 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 AOX1Q06278 1338 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
MSH6-208ENST00000493177 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 ATP5JP18859 108 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 COL13A1Q5TAT6 717 aaPredicted RBP16.31■□□□□ 0.2
MSH6-208ENST00000493177 ARMC9Q7Z3E5 817 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
MSH6-208ENST00000493177 OSBPL3Q9H4L5 887 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
MSH6-208ENST00000493177 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 PCDHAC2Q9Y5I4 1007 aa16.31■□□□□ 0.2
MSH6-208ENST00000493177 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
MSH6-208ENST00000493177 CRKP46108 304 aa16.3■□□□□ 0.2
MSH6-208ENST00000493177 TNFAIP1Q13829 316 aa16.3■□□□□ 0.2
MSH6-208ENST00000493177 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
MSH6-208ENST00000493177 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms