RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 TMEM39BQ9GZU3 492 aa15.45■□□□□ 0.06
GPNMB-214ENST00000492858 TDRD3Q9H7E2 651 aaKnown RBP15.45■□□□□ 0.06
GPNMB-214ENST00000492858 SPDYE5A6NIY4 337 aa15.44■□□□□ 0.06
GPNMB-214ENST00000492858 TCP10L2B9ZVM9 353 aa15.44■□□□□ 0.06
GPNMB-214ENST00000492858 CETPP11597 493 aa15.44■□□□□ 0.06
GPNMB-214ENST00000492858 GJA8P48165 433 aa15.44■□□□□ 0.06
GPNMB-214ENST00000492858 GNAI1P63096 354 aa15.44■□□□□ 0.06
GPNMB-214ENST00000492858 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
GPNMB-214ENST00000492858 ZCCHC17Q9NP64 241 aaKnown RBP15.44■□□□□ 0.06
GPNMB-214ENST00000492858 SRRDQ9UH36 339 aa15.44■□□□□ 0.06
GPNMB-214ENST00000492858 ANKRD18BA2A2Z9 1011 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 SOX1O00570 391 aaPredicted RBP15.43■□□□□ 0.06
GPNMB-214ENST00000492858 ZBTB7BO15156 539 aaPredicted RBP15.43■□□□□ 0.06
GPNMB-214ENST00000492858 CSF1RP07333 972 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 GJB1P08034 283 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 CCL5P13501 91 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 PSMC4P43686 418 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 RAET1EQ8TD07 263 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 TRIM47Q96LD4 638 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 SERPINA10Q9UK55 444 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 TTF2Q9UNY4 1162 aaKnown RBP15.43■□□□□ 0.06
GPNMB-214ENST00000492858 ADAMTS8Q9UP79 889 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 RIPOR2Q9Y4F9 1068 aa15.43■□□□□ 0.06
GPNMB-214ENST00000492858 CTGFP29279 349 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 GRK4P32298 578 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 TNNI2P48788 182 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
GPNMB-214ENST00000492858 SNAPC2Q13487 334 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 GCKRQ14397 625 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 C17orf99Q6UX52 265 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 ERO1BQ86YB8 467 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 DZIP1LQ8IYY4 767 aaKnown RBP15.42■□□□□ 0.06
GPNMB-214ENST00000492858 RNF208Q9H0X6 261 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 BIN2Q9UBW5 565 aaPredicted RBP15.42■□□□□ 0.06
GPNMB-214ENST00000492858 CPA4Q9UI42 421 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 SNCAIPQ9Y6H5 919 aa15.42■□□□□ 0.06
GPNMB-214ENST00000492858 A0A1W2PPC1 479 aa15.41■□□□□ 0.06
GPNMB-214ENST00000492858 IRF6O14896 467 aa15.41■□□□□ 0.06
GPNMB-214ENST00000492858 FARP2O94887 1054 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-214ENST00000492858 FMNL1O95466 1100 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-214ENST00000492858 OSBPP22059 807 aa15.41■□□□□ 0.06
GPNMB-214ENST00000492858 HOXD10P28358 340 aa15.41■□□□□ 0.06
GPNMB-214ENST00000492858 CASP7P55210 303 aa15.41■□□□□ 0.06
GPNMB-214ENST00000492858 CALD1Q05682 793 aaKnown RBP15.41■□□□□ 0.06
GPNMB-214ENST00000492858 MFSD14BQ5SR56 506 aa15.41■□□□□ 0.06
GPNMB-214ENST00000492858 TSPYL6Q8N831 410 aa15.41■□□□□ 0.06
GPNMB-214ENST00000492858 ZKSCAN4Q969J2 545 aaPredicted RBP15.4■□□□□ 0.06
GPNMB-214ENST00000492858 WRNIP1Q96S55 665 aa15.4■□□□□ 0.06
GPNMB-214ENST00000492858 STK31Q9BXU1 1019 aa15.4■□□□□ 0.06
GPNMB-214ENST00000492858 FAM205AQ6ZU69 1335 aa15.4■□□□□ 0.06
GPNMB-214ENST00000492858 MYPNQ86TC9 1320 aa15.4■□□□□ 0.06
GPNMB-214ENST00000492858 PLIN1O60240 522 aa15.39■□□□□ 0.05
GPNMB-214ENST00000492858 CRKP46108 304 aa15.39■□□□□ 0.05
GPNMB-214ENST00000492858 UBXN2AP68543 259 aa15.39■□□□□ 0.05
GPNMB-214ENST00000492858 IFIT5Q13325 482 aaKnown RBP15.39■□□□□ 0.05
GPNMB-214ENST00000492858 PPIL2Q13356 520 aa15.39■□□□□ 0.05
GPNMB-214ENST00000492858 G2E3Q7L622 706 aa15.39■□□□□ 0.05
GPNMB-214ENST00000492858 U2AF1L4Q8WU68 220 aaKnown RBP15.39■□□□□ 0.05
GPNMB-214ENST00000492858 MYH16Q9H6N6 1097 aa15.39■□□□□ 0.05
GPNMB-214ENST00000492858 CHMP3Q9Y3E7 222 aa15.39■□□□□ 0.05
GPNMB-214ENST00000492858 MYBBP1AQ9BQG0 1328 aaKnown RBP15.39■□□□□ 0.05
GPNMB-214ENST00000492858 EVI5O60447 810 aa15.38■□□□□ 0.05
GPNMB-214ENST00000492858 STAP2Q9UGK3 403 aa15.38■□□□□ 0.05
GPNMB-214ENST00000492858 APAF1O14727 1248 aa15.37■□□□□ 0.05
GPNMB-214ENST00000492858 CACNB3P54284 484 aa15.37■□□□□ 0.05
GPNMB-214ENST00000492858 PRKCZQ05513 592 aa15.37■□□□□ 0.05
GPNMB-214ENST00000492858 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.37■□□□□ 0.05
GPNMB-214ENST00000492858 TDRD7Q8NHU6 1098 aaKnown RBP15.37■□□□□ 0.05
GPNMB-214ENST00000492858 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
GPNMB-214ENST00000492858 PDHXO00330 501 aa15.36■□□□□ 0.05
GPNMB-214ENST00000492858 ANKRD23Q86SG2 305 aa15.36■□□□□ 0.05
GPNMB-214ENST00000492858 UNC93B1Q9H1C4 597 aa15.36■□□□□ 0.05
GPNMB-214ENST00000492858 SGPL1O95470 568 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 SLC4A2P04920 1241 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 GYG1P46976 350 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 FOXO4P98177 505 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 TAF7LQ5H9L4 462 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 LDHAL6AQ6ZMR3 332 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
GPNMB-214ENST00000492858 CNNM1Q9NRU3 951 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 VCANP13611 3396 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 ADGRA2Q96PE1 1338 aa15.35■□□□□ 0.05
GPNMB-214ENST00000492858 HIBADHP31937 336 aaKnown RBP15.34■□□□□ 0.05
GPNMB-214ENST00000492858 PPATQ06203 517 aa15.34■□□□□ 0.05
GPNMB-214ENST00000492858 GRIK5Q16478 980 aa15.34■□□□□ 0.05
GPNMB-214ENST00000492858 DEFB123Q8N688 67 aa15.34■□□□□ 0.05
GPNMB-214ENST00000492858 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
GPNMB-214ENST00000492858 DNAAF4Q8WXU2 420 aa15.34■□□□□ 0.05
GPNMB-214ENST00000492858 HOOK2Q96ED9 719 aa15.34■□□□□ 0.05
GPNMB-214ENST00000492858 A0A1B0GUL6 1792 aa15.34■□□□□ 0.05
GPNMB-214ENST00000492858 TFRCP02786 760 aaKnown RBP15.33■□□□□ 0.04
GPNMB-214ENST00000492858 FCGRTP55899 365 aa15.33■□□□□ 0.04
GPNMB-214ENST00000492858 FLIIQ13045 1269 aa15.33■□□□□ 0.04
GPNMB-214ENST00000492858 FKBP5Q13451 457 aaPredicted RBP15.33■□□□□ 0.04
GPNMB-214ENST00000492858 CCDC57Q2TAC2 916 aa15.33■□□□□ 0.04
GPNMB-214ENST00000492858 DCAF15Q66K64 600 aa15.33■□□□□ 0.04
GPNMB-214ENST00000492858 LMBR1LQ6UX01 489 aa15.33■□□□□ 0.04
GPNMB-214ENST00000492858 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms