RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 PRDM6Q9NQX0 595 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 MKL2Q9ULH7 1088 aa6.32□□□□□ -1.4
CLK1-213ENST00000492793 SPDYE3A6NKU9 549 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 PIK3R2O00459 728 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 FAM160A1Q05DH4 1040 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 TRIM28Q13263 835 aaKnown RBP6.31□□□□□ -1.4
CLK1-213ENST00000492793 PDE3AQ14432 1141 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 LRRC14Q15048 493 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 SNAP47Q5SQN1 464 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 DIEXFQ68CQ4 756 aaKnown RBP6.31□□□□□ -1.4
CLK1-213ENST00000492793 KLHL23Q8NBE8 558 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 ANKRD24Q8TF21 1146 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 ACSBG1Q96GR2 724 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 TMEM74Q96NL1 305 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 RSRP1Q9BUV0 290 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 PLVAPQ9BX97 442 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 EMILIN2Q9BXX0 1053 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 ACBD3Q9H3P7 528 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 OSGEPQ9NPF4 335 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 INPP5FQ9Y2H2 1132 aa6.31□□□□□ -1.4
CLK1-213ENST00000492793 FAM229AH3BQW9 127 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 GNB5O14775 395 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 CYP11A1P05108 521 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 ARNTP27540 789 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 ZC3H6P61129 1189 aaKnown RBP6.3□□□□□ -1.4
CLK1-213ENST00000492793 AP3B2Q13367 1082 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 GNL2Q13823 731 aaKnown RBP6.3□□□□□ -1.4
CLK1-213ENST00000492793 SUZ12Q15022 739 aaKnown RBP6.3□□□□□ -1.4
CLK1-213ENST00000492793 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 POU4F3Q15319 338 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 MAP1SQ66K74 1059 aaPredicted RBP6.3□□□□□ -1.4
CLK1-213ENST00000492793 ERMP1Q7Z2K6 904 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 JARID2Q92833 1246 aaPredicted RBP6.3□□□□□ -1.4
CLK1-213ENST00000492793 WNT8BQ93098 351 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 MIR1-1HGQ9H1L0 117 aa6.3□□□□□ -1.4
CLK1-213ENST00000492793 DDX41Q9UJV9 622 aaKnown RBP6.3□□□□□ -1.4
CLK1-213ENST00000492793 A0A0A0MRY4 1105 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 DDX3YO15523 660 aaKnown RBP6.29□□□□□ -1.4
CLK1-213ENST00000492793 WIPF1O43516 503 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
CLK1-213ENST00000492793 ARHGEF15O94989 841 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 PF4P02776 101 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 MAOBP27338 520 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 CD68P34810 354 aaPredicted RBP6.29□□□□□ -1.4
CLK1-213ENST00000492793 EIF4A3P38919 411 aaKnown RBP6.29□□□□□ -1.4
CLK1-213ENST00000492793 TNNI2P48788 182 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 RACK1P63244 317 aaKnown RBP6.29□□□□□ -1.4
CLK1-213ENST00000492793 RAD51AP2Q09MP3 1159 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 NAALADL2Q58DX5 795 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 PRRT3Q5FWE3 981 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 LLGL2Q6P1M3 1020 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 MAP4K3Q8IVH8 894 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 GALNT11Q8NCW6 608 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 GRIN3AQ8TCU5 1115 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 STK35Q8TDR2 534 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 DCAF11Q8TEB1 546 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 TRIM11Q96F44 468 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 SPON2Q9BUD6 331 aa6.29□□□□□ -1.4
CLK1-213ENST00000492793 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
CLK1-213ENST00000492793 CNTNAP5Q8WYK1 1306 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 GSTP1P09211 210 aaKnown RBP6.28□□□□□ -1.4
CLK1-213ENST00000492793 BMP6P22004 513 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 HNRNPUQ00839 825 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLK1-213ENST00000492793 INSM1Q01101 510 aaPredicted RBP6.28□□□□□ -1.4
CLK1-213ENST00000492793 CAMK2GQ13555 558 aaPredicted RBP6.28□□□□□ -1.4
CLK1-213ENST00000492793 COL9A3Q14050 684 aaPredicted RBP6.28□□□□□ -1.4
CLK1-213ENST00000492793 AGMOQ6ZNB7 445 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 BEND7Q8N7W2 519 aaPredicted RBP6.28□□□□□ -1.4
CLK1-213ENST00000492793 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 PHC3Q8NDX5 983 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 SRA1Q9HD15 236 aaKnown RBP6.28□□□□□ -1.4
CLK1-213ENST00000492793 RAD18Q9NS91 495 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 CYP8B1Q9UNU6 501 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 PCDHB5Q9Y5E4 795 aa6.28□□□□□ -1.4
CLK1-213ENST00000492793 ECEL1O95672 775 aa6.27□□□□□ -1.41
CLK1-213ENST00000492793 HOXB4P17483 251 aaPredicted RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 TFE3P19532 575 aaPredicted RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 RPS26P62854 115 aaKnown RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 PAK2Q13177 524 aa6.27□□□□□ -1.41
CLK1-213ENST00000492793 SEPT6Q14141 434 aa6.27□□□□□ -1.41
CLK1-213ENST00000492793 DUOXA2Q1HG44 320 aa6.27□□□□□ -1.41
CLK1-213ENST00000492793 LINC00114Q6XXX2 140 aa6.27□□□□□ -1.41
CLK1-213ENST00000492793 FMR1NBQ8N0W7 255 aaPredicted RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 DTWD1Q8N5C7 304 aa6.27□□□□□ -1.41
CLK1-213ENST00000492793 ZNF296Q8WUU4 475 aaPredicted RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 NOP53Q9NZM5 478 aaKnown RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 PPP1R1BQ9UD71 204 aaPredicted RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 ADAMTS8Q9UP79 889 aa6.27□□□□□ -1.41
CLK1-213ENST00000492793 SUPT16HQ9Y5B9 1047 aaKnown RBP6.27□□□□□ -1.41
CLK1-213ENST00000492793 TLR3O15455 904 aaKnown RBP6.26□□□□□ -1.41
CLK1-213ENST00000492793 DEAF1O75398 565 aaPredicted RBP6.26□□□□□ -1.41
CLK1-213ENST00000492793 BPNT1O95861 308 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 LMNB2Q03252 620 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 FOXD4L6Q3SYB3 417 aaPredicted RBP6.26□□□□□ -1.41
CLK1-213ENST00000492793 RASIP1Q5U651 963 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
CLK1-213ENST00000492793 FOXD4L3Q6VB84 417 aaPredicted RBP6.26□□□□□ -1.41
CLK1-213ENST00000492793 FBXO11Q86XK2 927 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms