RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 DENND2AQ9ULE3 1009 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 ABT1Q9ULW3 272 aaKnown RBP8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 EXOC6BQ9Y2D4 811 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 SUGT1Q9Y2Z0 365 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 FPGT-TNNI3KV9GXZ4 949 aa8.88□□□□□ -0.99
PDLIM1-204ENST00000492511 SALL1Q9NSC2 1324 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 SEMA3EO15041 775 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 FOXN1O15353 648 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 ARID4AP29374 1257 aaPredicted RBP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 PRDX5P30044 214 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 RBM5P52756 815 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 SPDYE2Q495Y8 402 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 CYP4F22Q6NT55 531 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 PI16Q6UXB8 463 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 MOB2Q70IA6 237 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 TDRD3Q9H7E2 651 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 GBA2Q9HCG7 927 aaPredicted RBP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 GNL3LQ9NVN8 582 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 TLR7Q9NYK1 1049 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 HMG20BQ9P0W2 317 aa8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 ZNF70Q9UC06 446 aaPredicted RBP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 DBNLQ9UJU6 430 aaKnown RBP8.87□□□□□ -0.99
PDLIM1-204ENST00000492511 PDS5AQ29RF7 1337 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 WDR33Q9C0J8 1336 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 MCAMP43121 646 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 MAP2K1Q02750 393 aaPredicted RBP8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 OS9Q13438 667 aaPredicted RBP8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 DIXDC1Q155Q3 683 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 HHIPL2Q6UWX4 724 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 APOBEC3FQ8IUX4 373 aaKnown RBP8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 ZNF384Q8TF68 577 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 TEKT1Q969V4 418 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 HHIPL1Q96JK4 782 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 ZDHHC15Q96MV8 337 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 BEGAINQ9BUH8 593 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 CCDC8Q9H0W5 538 aaPredicted RBP8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 DEFB129Q9H1M3 183 aa8.86□□□□□ -0.99
PDLIM1-204ENST00000492511 FAM155AB1AL88 458 aaPredicted RBP8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 AOC2O75106 756 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 LDHBP07195 334 aaKnown RBP8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 HUNKP57058 714 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 RASA3Q14644 834 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 GORABQ5T7V8 394 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 CDAN1Q8IWY9 1227 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 C2orf69Q8N8R5 385 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 SPATA5Q8NB90 893 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 RHPN1Q8TCX5 695 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 ZNF512BQ96KM6 892 aaPredicted RBP8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 CAPNS2Q96L46 248 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 TEPSINQ96N21 525 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 ZIC5Q96T25 663 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 CHMP4BQ9H444 224 aaKnown RBP8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 VEZTQ9HBM0 779 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 IL1RAPL2Q9NP60 686 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 FZD1Q9UP38 647 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 DAGLAQ9Y4D2 1042 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
PDLIM1-204ENST00000492511 SSC5DA1L4H1 1573 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 TCP10L2B9ZVM9 353 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 MYO1BO43795 1136 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 HMMRO75330 724 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 CYP2E1P05181 493 aaPredicted RBP8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 UQCRFS1P1P0C7P4 283 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 CACNB3P54284 484 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 NBPF12Q5TAG4 269 aaPredicted RBP8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 CDC42EP5Q6NZY7 148 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 ERC1Q8IUD2 1116 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 ARAP2Q8WZ64 1704 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 CRBNQ96SW2 442 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 SNRKQ9NRH2 765 aa8.84□□□□□ -0.99
PDLIM1-204ENST00000492511 GAKO14976 1311 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 MAST3O60307 1309 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 TRPM7Q96QT4 1865 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 POLR2AP24928 1970 aaKnown RBP8.83□□□□□ -1
PDLIM1-204ENST00000492511 APBB1O00213 710 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 RAB11FIP3O75154 756 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 ECE1P42892 770 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 LBX1P52954 281 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 FKBP1BP68106 108 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 MECOMQ03112 1051 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 HSP90AB4PQ58FF6 505 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 CCDC158Q5M9N0 1113 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 TTC39AQ5SRH9 613 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 LDLRAD1Q5T700 205 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 RGMBQ6NW40 437 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 AACSQ86V21 672 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 ZGPATQ8N5A5 531 aaKnown RBP8.83□□□□□ -1
PDLIM1-204ENST00000492511 NSUN4Q96CB9 384 aaKnown RBP8.83□□□□□ -1
PDLIM1-204ENST00000492511 KIF1BPQ96EK5 621 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 FAM163AQ96GL9 167 aaPredicted RBP8.83□□□□□ -1
PDLIM1-204ENST00000492511 TMEM39BQ9GZU3 492 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 WBP1LQ9NX94 342 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 ABCF2Q9UG63 623 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 PPP2R3BQ9Y5P8 575 aa8.83□□□□□ -1
PDLIM1-204ENST00000492511 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
PDLIM1-204ENST00000492511 USP2O75604 605 aaPredicted RBP8.82□□□□□ -1
PDLIM1-204ENST00000492511 ZAP70P43403 619 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 ZNF157P51786 506 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms