RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
SS18L1-205ENST00000492466 MEIS3Q99687 375 aa18.29■□□□□ 0.52
SS18L1-205ENST00000492466 SERPINA10Q9UK55 444 aa18.29■□□□□ 0.52
SS18L1-205ENST00000492466 RCAN3Q9UKA8 241 aa18.29■□□□□ 0.52
SS18L1-205ENST00000492466 MYO1BO43795 1136 aa18.28■□□□□ 0.52
SS18L1-205ENST00000492466 USP2O75604 605 aaPredicted RBP18.28■□□□□ 0.52
SS18L1-205ENST00000492466 SREBF2Q12772 1141 aa18.28■□□□□ 0.52
SS18L1-205ENST00000492466 RASA3Q14644 834 aa18.28■□□□□ 0.52
SS18L1-205ENST00000492466 SPDYE2Q495Y8 402 aa18.28■□□□□ 0.52
SS18L1-205ENST00000492466 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
SS18L1-205ENST00000492466 TTF2Q9UNY4 1162 aaKnown RBP18.28■□□□□ 0.52
SS18L1-205ENST00000492466 LRRFIP2Q9Y608 721 aaKnown RBP18.28■□□□□ 0.52
SS18L1-205ENST00000492466 LAMB1P07942 1786 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 UNCXA6NJT0 531 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
SS18L1-205ENST00000492466 PDE8BO95263 885 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 SUPT20HL1Q3ZLR7 823 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 TMEM57Q8N5G2 664 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 SLC10A4Q96EP9 437 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 TEPSINQ96N21 525 aa18.27■□□□□ 0.52
SS18L1-205ENST00000492466 ZNF70Q9UC06 446 aaPredicted RBP18.27■□□□□ 0.52
SS18L1-205ENST00000492466 ARAP2Q8WZ64 1704 aa18.26■□□□□ 0.51
SS18L1-205ENST00000492466 ZBTB48P10074 688 aaPredicted RBP18.26■□□□□ 0.51
SS18L1-205ENST00000492466 MS4A1P11836 297 aa18.26■□□□□ 0.51
SS18L1-205ENST00000492466 GJA5P36382 358 aa18.26■□□□□ 0.51
SS18L1-205ENST00000492466 RBM5P52756 815 aaKnown RBP eCLIP18.26■□□□□ 0.515e-10■■□□□ 14.1
SS18L1-205ENST00000492466 CDAN1Q8IWY9 1227 aa18.26■□□□□ 0.51
SS18L1-205ENST00000492466 WNK4Q96J92 1243 aa18.26■□□□□ 0.51
SS18L1-205ENST00000492466 TDRD3Q9H7E2 651 aaKnown RBP18.26■□□□□ 0.51
SS18L1-205ENST00000492466 HPS5Q9UPZ3 1129 aa18.26■□□□□ 0.51
SS18L1-205ENST00000492466 FGFR2P21802 821 aa18.25■□□□□ 0.51
SS18L1-205ENST00000492466 RFX5P48382 616 aaPredicted RBP18.25■□□□□ 0.51
SS18L1-205ENST00000492466 IFNL1Q8IU54 200 aa18.25■□□□□ 0.51
SS18L1-205ENST00000492466 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
SS18L1-205ENST00000492466 IQSEC3Q9UPP2 1182 aaPredicted RBP18.25■□□□□ 0.51
SS18L1-205ENST00000492466 MYH13Q9UKX3 1938 aa18.25■□□□□ 0.51
SS18L1-205ENST00000492466 MANSC4A6NHS7 340 aaPredicted RBP18.24■□□□□ 0.51
SS18L1-205ENST00000492466 IGF2BP3O00425 579 aaKnown RBP eCLIP18.24■□□□□ 0.51
SS18L1-205ENST00000492466 CRKP46108 304 aa18.24■□□□□ 0.51
SS18L1-205ENST00000492466 SOX10P56693 466 aa18.24■□□□□ 0.51
SS18L1-205ENST00000492466 INHBEP58166 350 aa18.24■□□□□ 0.51
SS18L1-205ENST00000492466 PKN2Q16513 984 aaKnown RBP18.24■□□□□ 0.51
SS18L1-205ENST00000492466 METTL24Q5JXM2 366 aa18.24■□□□□ 0.51
SS18L1-205ENST00000492466 GNAI2P04899 355 aa18.23■□□□□ 0.51
SS18L1-205ENST00000492466 BCAMP50895 628 aa18.23■□□□□ 0.51
SS18L1-205ENST00000492466 PDE4DIPQ5VU43 2346 aa18.22■□□□□ 0.51
SS18L1-205ENST00000492466 FKTNO75072 461 aa18.22■□□□□ 0.51
SS18L1-205ENST00000492466 ALDH1A1P00352 501 aa18.22■□□□□ 0.51
SS18L1-205ENST00000492466 IREB2P48200 963 aaKnown RBP18.22■□□□□ 0.51
SS18L1-205ENST00000492466 HDLBPQ00341 1268 aaKnown RBP18.22■□□□□ 0.51
SS18L1-205ENST00000492466 PTPN18Q99952 460 aa18.22■□□□□ 0.51
SS18L1-205ENST00000492466 SIL1Q9H173 461 aa18.22■□□□□ 0.51
SS18L1-205ENST00000492466 OTOFQ9HC10 1997 aa18.22■□□□□ 0.51
SS18L1-205ENST00000492466 TESPA1A2RU30 521 aaPredicted RBP18.21■□□□□ 0.51
SS18L1-205ENST00000492466 CHAF1AQ13111 956 aaPredicted RBP18.21■□□□□ 0.51
SS18L1-205ENST00000492466 TNFAIP1Q13829 316 aa18.21■□□□□ 0.51
SS18L1-205ENST00000492466 CAVIN4Q5BKX8 364 aa18.21■□□□□ 0.51
SS18L1-205ENST00000492466 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.21■□□□□ 0.51
SS18L1-205ENST00000492466 ATG9AQ7Z3C6 839 aa18.21■□□□□ 0.51
SS18L1-205ENST00000492466 ANKRD13AQ8IZ07 590 aa18.21■□□□□ 0.51
SS18L1-205ENST00000492466 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
SS18L1-205ENST00000492466 MRIQ9BWK5 157 aa18.21■□□□□ 0.51
SS18L1-205ENST00000492466 TMEM39BQ9GZU3 492 aa18.21■□□□□ 0.51
SS18L1-205ENST00000492466 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.21■□□□□ 0.51
SS18L1-205ENST00000492466 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
SS18L1-205ENST00000492466 EYA2O00167 538 aa18.2■□□□□ 0.5
SS18L1-205ENST00000492466 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
SS18L1-205ENST00000492466 FBXO46Q6PJ61 603 aaPredicted RBP18.2■□□□□ 0.5
SS18L1-205ENST00000492466 VPS37DQ86XT2 251 aa18.2■□□□□ 0.5
SS18L1-205ENST00000492466 TBC1D22AQ8WUA7 517 aa18.2■□□□□ 0.5
SS18L1-205ENST00000492466 MS4A4AQ96JQ5 239 aa18.2■□□□□ 0.5
SS18L1-205ENST00000492466 RLBP1P12271 317 aa18.19■□□□□ 0.5
SS18L1-205ENST00000492466 PUM3Q15397 648 aaKnown RBP18.19■□□□□ 0.5
SS18L1-205ENST00000492466 APOBEC3HQ6NTF7 200 aaKnown RBP18.19■□□□□ 0.5
SS18L1-205ENST00000492466 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
SS18L1-205ENST00000492466 ZDHHC15Q96MV8 337 aa18.19■□□□□ 0.5
SS18L1-205ENST00000492466 CACNB3P54284 484 aa18.18■□□□□ 0.5
SS18L1-205ENST00000492466 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
SS18L1-205ENST00000492466 ELP3Q9H9T3 547 aa18.18■□□□□ 0.5
SS18L1-205ENST00000492466 CAP1Q01518 475 aa18.17■□□□□ 0.5
SS18L1-205ENST00000492466 CRHR2Q13324 411 aa18.17■□□□□ 0.5
SS18L1-205ENST00000492466 TEKT1Q969V4 418 aa18.17■□□□□ 0.5
SS18L1-205ENST00000492466 OPTNQ96CV9 577 aa18.17■□□□□ 0.5
SS18L1-205ENST00000492466 C1orf115Q9H7X2 142 aa18.17■□□□□ 0.5
SS18L1-205ENST00000492466 SUGT1Q9Y2Z0 365 aa18.17■□□□□ 0.5
SS18L1-205ENST00000492466 FRAT2O75474 233 aaPredicted RBP18.16■□□□□ 0.5
SS18L1-205ENST00000492466 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
SS18L1-205ENST00000492466 MAP3K9P80192 1104 aa18.16■□□□□ 0.5
SS18L1-205ENST00000492466 VGLL4Q14135 290 aa18.16■□□□□ 0.5
SS18L1-205ENST00000492466 LPIN2Q92539 896 aa18.16■□□□□ 0.5
SS18L1-205ENST00000492466 PA2G4Q9UQ80 394 aaKnown RBP18.16■□□□□ 0.5
SS18L1-205ENST00000492466 SLC5A1P13866 664 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 TNNI2P48788 182 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
SS18L1-205ENST00000492466 FKBP1CQ5VVH2 108 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 HHIPL2Q6UWX4 724 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 OTOP1Q7RTM1 612 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 FAM83AQ86UY5 434 aa18.15■□□□□ 0.5
SS18L1-205ENST00000492466 BRI3BPQ8WY22 251 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms