RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 MYH2Q9UKX2 1941 aa30.53■■■□□ 2.48
UPF3A-209ENST00000492270 FAM155AB1AL88 458 aaPredicted RBP30.53■■■□□ 2.48
UPF3A-209ENST00000492270 MS4A1P11836 297 aa30.53■■■□□ 2.48
UPF3A-209ENST00000492270 FKBP1BP68106 108 aa30.53■■■□□ 2.48
UPF3A-209ENST00000492270 SPDYE2Q495Y8 402 aa30.53■■■□□ 2.48
UPF3A-209ENST00000492270 ZNF70Q9UC06 446 aaPredicted RBP30.53■■■□□ 2.48
UPF3A-209ENST00000492270 COG6Q9Y2V7 657 aa30.53■■■□□ 2.48
UPF3A-209ENST00000492270 MAP2K2P36507 400 aa30.52■■■□□ 2.48
UPF3A-209ENST00000492270 ZNF157P51786 506 aaPredicted RBP30.52■■■□□ 2.48
UPF3A-209ENST00000492270 MAP2K1Q02750 393 aaPredicted RBP30.52■■■□□ 2.48
UPF3A-209ENST00000492270 PRKG1Q13976 671 aa30.52■■■□□ 2.48
UPF3A-209ENST00000492270 MVPQ14764 893 aaKnown RBP30.52■■■□□ 2.48
UPF3A-209ENST00000492270 AIDAQ96BJ3 306 aa30.52■■■□□ 2.48
UPF3A-209ENST00000492270 NEUROD6Q96NK8 337 aa30.52■■■□□ 2.48
UPF3A-209ENST00000492270 UBE2Q2LH0YL09 131 aa30.51■■■□□ 2.47
UPF3A-209ENST00000492270 NF2P35240 595 aa30.51■■■□□ 2.47
UPF3A-209ENST00000492270 HDLBPQ00341 1268 aaKnown RBP30.51■■■□□ 2.47
UPF3A-209ENST00000492270 TTLL12Q14166 644 aaPredicted RBP30.51■■■□□ 2.47
UPF3A-209ENST00000492270 CEP85Q6P2H3 762 aa30.51■■■□□ 2.47
UPF3A-209ENST00000492270 TEKT1Q969V4 418 aa30.51■■■□□ 2.47
UPF3A-209ENST00000492270 DENND2AQ9ULE3 1009 aa30.51■■■□□ 2.47
UPF3A-209ENST00000492270 FZD1Q9UP38 647 aa30.51■■■□□ 2.47
UPF3A-209ENST00000492270 SUGT1Q9Y2Z0 365 aa30.51■■■□□ 2.47
UPF3A-209ENST00000492270 SEMA3EO15041 775 aa30.5■■■□□ 2.47
UPF3A-209ENST00000492270 PRDX5P30044 214 aa30.5■■■□□ 2.47
UPF3A-209ENST00000492270 RASGRF1Q13972 1273 aa30.5■■■□□ 2.47
UPF3A-209ENST00000492270 COL13A1Q5TAT6 717 aaPredicted RBP30.5■■■□□ 2.47
UPF3A-209ENST00000492270 OTOFQ9HC10 1997 aa30.5■■■□□ 2.47
UPF3A-209ENST00000492270 MAST3O60307 1309 aa30.49■■■□□ 2.47
UPF3A-209ENST00000492270 SURF6O75683 361 aaKnown RBP30.49■■■□□ 2.47
UPF3A-209ENST00000492270 NOGQ13253 232 aa30.49■■■□□ 2.47
UPF3A-209ENST00000492270 OS9Q13438 667 aaPredicted RBP30.49■■■□□ 2.47
UPF3A-209ENST00000492270 PPP2R3BQ9Y5P8 575 aa30.49■■■□□ 2.47
UPF3A-209ENST00000492270 SLC10A3P09131 477 aa30.48■■■□□ 2.47
UPF3A-209ENST00000492270 RASA3Q14644 834 aa30.48■■■□□ 2.47
UPF3A-209ENST00000492270 C20orf194Q5TEA3 1177 aa30.48■■■□□ 2.47
UPF3A-209ENST00000492270 SALL1Q9NSC2 1324 aa30.47■■■□□ 2.47
UPF3A-209ENST00000492270 AKAP11Q9UKA4 1901 aa30.47■■■□□ 2.47
UPF3A-209ENST00000492270 RASAL3Q86YV0 1011 aa30.47■■■□□ 2.47
UPF3A-209ENST00000492270 CCDC102AQ96A19 550 aa30.47■■■□□ 2.47
UPF3A-209ENST00000492270 ZDHHC15Q96MV8 337 aa30.47■■■□□ 2.47
UPF3A-209ENST00000492270 TCP10L2B9ZVM9 353 aa30.46■■■□□ 2.47
UPF3A-209ENST00000492270 ZBTB22O15209 634 aa30.46■■■□□ 2.47
UPF3A-209ENST00000492270 CACNB3P54284 484 aa30.46■■■□□ 2.47
UPF3A-209ENST00000492270 DIXDC1Q155Q3 683 aa30.46■■■□□ 2.47
UPF3A-209ENST00000492270 NBPF12Q5TAG4 269 aaPredicted RBP30.46■■■□□ 2.47
UPF3A-209ENST00000492270 DDX19BQ9UMR2 479 aa30.46■■■□□ 2.47
UPF3A-209ENST00000492270 APOBEC3HQ6NTF7 200 aaKnown RBP30.45■■■□□ 2.47
UPF3A-209ENST00000492270 HHIPL2Q6UWX4 724 aa30.45■■■□□ 2.47
UPF3A-209ENST00000492270 MRIQ9BWK5 157 aa30.45■■■□□ 2.47
UPF3A-209ENST00000492270 NOP58Q9Y2X3 529 aaKnown RBP30.45■■■□□ 2.47
UPF3A-209ENST00000492270 MYO5AQ9Y4I1 1855 aaKnown RBP30.44■■■□□ 2.46
UPF3A-209ENST00000492270 LDHBP07195 334 aaKnown RBP30.44■■■□□ 2.46
UPF3A-209ENST00000492270 CTCFP49711 727 aaPredicted RBP30.44■■■□□ 2.46
UPF3A-209ENST00000492270 TNFAIP1Q13829 316 aa30.44■■■□□ 2.46
UPF3A-209ENST00000492270 TNNI3KQ59H18 835 aa30.44■■■□□ 2.46
UPF3A-209ENST00000492270 CDAN1Q8IWY9 1227 aa30.44■■■□□ 2.46
UPF3A-209ENST00000492270 YTHDC1Q96MU7 727 aaKnown RBP30.44■■■□□ 2.46
UPF3A-209ENST00000492270 ANGEL1Q9UNK9 670 aaKnown RBP30.44■■■□□ 2.46
UPF3A-209ENST00000492270 FPGT-TNNI3KV9GXZ4 949 aa30.44■■■□□ 2.46
UPF3A-209ENST00000492270 HSPA8P11142 646 aaKnown RBP30.43■■■□□ 2.46
UPF3A-209ENST00000492270 KIF23Q02241 960 aaPredicted RBP30.43■■■□□ 2.46
UPF3A-209ENST00000492270 GORABQ5T7V8 394 aa30.43■■■□□ 2.46
UPF3A-209ENST00000492270 PI16Q6UXB8 463 aa30.43■■■□□ 2.46
UPF3A-209ENST00000492270 ARMC9Q7Z3E5 817 aa30.43■■■□□ 2.46
UPF3A-209ENST00000492270 DAGLAQ9Y4D2 1042 aa30.43■■■□□ 2.46
UPF3A-209ENST00000492270 PDS5AQ29RF7 1337 aaKnown RBP30.43■■■□□ 2.46
UPF3A-209ENST00000492270 LBX1P52954 281 aa30.42■■■□□ 2.46
UPF3A-209ENST00000492270 BEGAINQ9BUH8 593 aa30.42■■■□□ 2.46
UPF3A-209ENST00000492270 TMEM39BQ9GZU3 492 aa30.42■■■□□ 2.46
UPF3A-209ENST00000492270 GPR108Q9NPR9 543 aa30.42■■■□□ 2.46
UPF3A-209ENST00000492270 ZBTB40Q9NUA8 1239 aa30.42■■■□□ 2.46
UPF3A-209ENST00000492270 TSKSQ9UJT2 592 aa30.42■■■□□ 2.46
UPF3A-209ENST00000492270 TEPSINQ96N21 525 aa30.41■■■□□ 2.46
UPF3A-209ENST00000492270 HMG20BQ9P0W2 317 aa30.41■■■□□ 2.46
UPF3A-209ENST00000492270 EXOC6BQ9Y2D4 811 aa30.41■■■□□ 2.46
UPF3A-209ENST00000492270 AK9Q5TCS8 1911 aa30.41■■■□□ 2.46
UPF3A-209ENST00000492270 ARID4AP29374 1257 aaPredicted RBP30.4■■■□□ 2.46
UPF3A-209ENST00000492270 SUPT20HL1Q3ZLR7 823 aa30.4■■■□□ 2.46
UPF3A-209ENST00000492270 DBNDD2Q9BQY9 259 aa30.4■■■□□ 2.46
UPF3A-209ENST00000492270 ABCF2Q9UG63 623 aa30.4■■■□□ 2.46
UPF3A-209ENST00000492270 TNNI2P48788 182 aa30.39■■■□□ 2.46
UPF3A-209ENST00000492270 LDLRAD1Q5T700 205 aa30.39■■■□□ 2.46
UPF3A-209ENST00000492270 ZGPATQ8N5A5 531 aaKnown RBP30.39■■■□□ 2.46
UPF3A-209ENST00000492270 LAMB1P07942 1786 aa30.38■■■□□ 2.45
UPF3A-209ENST00000492270 MCAMP43121 646 aa30.38■■■□□ 2.45
UPF3A-209ENST00000492270 PDE3AQ14432 1141 aa30.38■■■□□ 2.45
UPF3A-209ENST00000492270 MAP3K11Q16584 847 aa30.38■■■□□ 2.45
UPF3A-209ENST00000492270 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.38■■■□□ 2.45
UPF3A-209ENST00000492270 SPATA5Q8NB90 893 aa30.38■■■□□ 2.45
UPF3A-209ENST00000492270 TMOD2Q9NZR1 351 aa30.38■■■□□ 2.45
UPF3A-209ENST00000492270 MAST2Q6P0Q8 1798 aa30.38■■■□□ 2.45
UPF3A-209ENST00000492270 PPP1R12BO60237 982 aaPredicted RBP30.37■■■□□ 2.45
UPF3A-209ENST00000492270 SIRT2Q8IXJ6 389 aa30.37■■■□□ 2.45
UPF3A-209ENST00000492270 TLR7Q9NYK1 1049 aaKnown RBP30.37■■■□□ 2.45
UPF3A-209ENST00000492270 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.37■■■□□ 2.45
UPF3A-209ENST00000492270 MKRN3Q13064 507 aaKnown RBP30.36■■■□□ 2.45
UPF3A-209ENST00000492270 CDC42EP5Q6NZY7 148 aa30.36■■■□□ 2.45
UPF3A-209ENST00000492270 CASP8AP2Q9UKL3 1982 aa30.35■■■□□ 2.45
UPF3A-209ENST00000492270 USP2O75604 605 aaPredicted RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 1510.3 ms