RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 SBNO1A3KN83 1393 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 CPS1P31327 1500 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 TMEM131LA2VDJ0 1609 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 ANKRD65E5RJM6 399 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 HNRNPH1P31943 449 aaKnown RBP7.38□□□□□ -1.23
CCDC6-202ENST00000491922 SCRN1Q12765 414 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 GGT6Q6P531 493 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 TOGARAM2Q6ZUX3 1019 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 NSUN7Q8NE18 718 aaKnown RBP7.38□□□□□ -1.23
CCDC6-202ENST00000491922 DPF2Q92785 391 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 BIN1O00499 593 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 RNF40O75150 1001 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 ALDH1L1O75891 902 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 YEATS4O95619 227 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 CCDC175P0C221 793 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 SF3A1Q15459 793 aaKnown RBP7.37□□□□□ -1.23
CCDC6-202ENST00000491922 USPL1Q5W0Q7 1092 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 TTLL5Q6EMB2 1281 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 A0A0D9SFI3 127 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 PTPDC1A2A3K4 754 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 EXOC5O00471 708 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 EBAG9O00559 213 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 KIF5CO60282 957 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 SHOX2O60902 331 aaPredicted RBP7.37□□□□□ -1.23
CCDC6-202ENST00000491922 CLSTN1O94985 981 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 MTX1Q13505 466 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 STK38Q15208 465 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 FAM43BQ6ZT52 329 aaPredicted RBP7.37□□□□□ -1.23
CCDC6-202ENST00000491922 EP400NLQ6ZTU2 488 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 KAT2BQ92831 832 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 ZSWIM4Q9H7M6 989 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 PUF60Q9UHX1 559 aaKnown RBP7.37□□□□□ -1.23
CCDC6-202ENST00000491922 TAF6LQ9Y6J9 622 aa7.37□□□□□ -1.23
CCDC6-202ENST00000491922 C21orf2O43822 256 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 PHACTR2O75167 634 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 ZNF202O95125 648 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 MCM3P25205 808 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 VSNL1P62760 191 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 PIP4K2BP78356 416 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 GOLGA8FQ08AF8 430 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 GOLGA8DPQ0D2H9 430 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 WHAMMP3Q1A5X7 153 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 WDR93Q6P2C0 686 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 OLFM4Q6UX06 510 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 LINC00301Q8NCQ3 95 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 PLCD4Q9BRC7 762 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 FSD1Q9BTV5 496 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 SIL1Q9H173 461 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 PLEKHA4Q9H4M7 779 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 SUGCTQ9HAC7 445 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 TUBE1Q9UJT0 475 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 ATXN2Q99700 1313 aaKnown RBP7.36□□□□□ -1.23
CCDC6-202ENST00000491922 CTAGE15A4D2H0 777 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 TMEM232C9JQI7 657 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 PRPF6O94906 941 aaKnown RBP7.36□□□□□ -1.23
CCDC6-202ENST00000491922 HMGB1P09429 215 aaKnown RBP7.36□□□□□ -1.23
CCDC6-202ENST00000491922 CTAGE8P0CG41 777 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 LIG3P49916 1009 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 KARSQ15046 597 aaKnown RBP7.36□□□□□ -1.23
CCDC6-202ENST00000491922 MAP9Q49MG5 647 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 SPECC1LQ69YQ0 1117 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 KCNV1Q6PIU1 500 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 GBP6Q6ZN66 633 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 CTAGE6Q86UF2 777 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 CTAGE4Q8IX94 777 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 PDILTQ8N807 584 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 TC2NQ8N9U0 490 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 SMARCC1Q92922 1105 aaPredicted RBP7.36□□□□□ -1.23
CCDC6-202ENST00000491922 POLR3EQ9NVU0 708 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 BABAM1Q9NWV8 329 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 FAM169AQ9Y6X4 670 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 AGLP35573 1532 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 FMN2Q9NZ56 1722 aa7.36□□□□□ -1.23
CCDC6-202ENST00000491922 RIMS1Q86UR5 1692 aaKnown RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 CTAGE9A4FU28 777 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 LRRIQ3A6PVS8 624 aaPredicted RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 SPTLC2O15270 562 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 TAF5LO75529 589 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 SYF2O95926 243 aaKnown RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 RHOXF2BP0C7M4 288 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 CALRP27797 417 aaKnown RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 INPP5BP32019 993 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 FOSBP53539 338 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 HSPA2P54652 639 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 DDR1Q08345 913 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 WWC2Q6AWC2 1192 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 AACSQ86V21 672 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 ARHGEF25Q86VW2 580 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 PRPF38AQ8NAV1 312 aaKnown RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 GIMAP7Q8NHV1 300 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 RHOXF2Q9BQY4 288 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 NAA15Q9BXJ9 866 aaKnown RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 U3KPZ7 1027 aaPredicted RBP7.35□□□□□ -1.23
CCDC6-202ENST00000491922 LAMA4Q16363 1823 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 PEAK1Q9H792 1746 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 CDHR2Q9BYE9 1310 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 SALL1Q9NSC2 1324 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 MLH3Q9UHC1 1453 aa7.35□□□□□ -1.23
CCDC6-202ENST00000491922 CTDNEP1O95476 244 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms