RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 ICMTO60725 284 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 MRPL58Q14197 206 aaKnown RBP5.91□□□□□ -1.46
CLIP4-211ENST00000491701 EAPPQ56P03 285 aaPredicted RBP5.91□□□□□ -1.46
CLIP4-211ENST00000491701 SIX5Q8N196 739 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 ZNF837Q96EG3 531 aaPredicted RBP5.91□□□□□ -1.46
CLIP4-211ENST00000491701 PSMD1Q99460 953 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 GAS2L1Q99501 681 aaPredicted RBP5.91□□□□□ -1.46
CLIP4-211ENST00000491701 TUT1Q9H6E5 874 aaKnown RBP5.91□□□□□ -1.46
CLIP4-211ENST00000491701 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 DCTN4Q9UJW0 460 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 ZNF232Q9UNY5 417 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 PARP3Q9Y6F1 533 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 RGPD2P0DJD1 1756 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 PHLPP1O60346 1717 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 RGPD1P0DJD0 1748 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 PXDNQ92626 1479 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 NSD2O96028 1365 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 AATKQ6ZMQ8 1374 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 CGNL1Q0VF96 1302 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 ZNF521Q96K83 1311 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 PHF20L1A8MW92 1017 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 GPR25O00155 361 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 IL13P35225 146 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 PLA2G4AP47712 749 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 RAD51AP2Q09MP3 1159 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 MORC1Q86VD1 984 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 GLYCTKQ8IVS8 523 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 MICAL1Q8TDZ2 1067 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 PLEKHF1Q96S99 279 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
CLIP4-211ENST00000491701 NFAT5O94916 1531 aa5.9□□□□□ -1.46
CLIP4-211ENST00000491701 DCCP43146 1447 aa5.9□□□□□ -1.46
CLIP4-211ENST00000491701 BLMP54132 1417 aaPredicted RBP5.9□□□□□ -1.46
CLIP4-211ENST00000491701 FOXO3O43524 673 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 PRMT3O60678 531 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 GPC1P35052 558 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 ZNF211Q13398 564 aaPredicted RBP5.9□□□□□ -1.47
CLIP4-211ENST00000491701 NBPF10Q6P3W6 841 aaKnown RBP5.9□□□□□ -1.47
CLIP4-211ENST00000491701 RIPOR1Q6ZS17 1223 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 BRINP3Q76B58 766 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 TAS1R3Q7RTX0 852 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 KRT28Q7Z3Y7 464 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 HDGFL2Q7Z4V5 671 aaPredicted RBP5.9□□□□□ -1.47
CLIP4-211ENST00000491701 SLC9A9Q8IVB4 645 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 FAM9BQ8IZU0 186 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 NBPF15Q8N660 670 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 SLC43A3Q8NBI5 491 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 SCG3Q8WXD2 468 aaKnown RBP5.9□□□□□ -1.47
CLIP4-211ENST00000491701 PRIMPOLQ96LW4 560 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 GRIP2Q9C0E4 1043 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 TSPAN10Q9H1Z9 355 aaPredicted RBP5.9□□□□□ -1.47
CLIP4-211ENST00000491701 GPAMQ9HCL2 828 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 TIMMDC1Q9NPL8 285 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 PRKAG2Q9UGJ0 569 aa5.9□□□□□ -1.47
CLIP4-211ENST00000491701 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.9□□□□□ -1.47
CLIP4-211ENST00000491701 NHSL1Q5SYE7 1610 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 USP19O94966 1318 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 PPP1R12BO60237 982 aaPredicted RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 RAB11FIP3O75154 756 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 ATP2B1P20020 1258 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 TNNT2P45379 298 aaPredicted RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 XPCQ01831 940 aaPredicted RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 CCDC144BQ3MJ40 725 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 C4orf17Q53FE4 359 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 LDLRAD1Q5T700 205 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 TRMT2AQ8IZ69 625 aaKnown RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 BEND7Q8N7W2 519 aaPredicted RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 RHBDD1Q8TEB9 315 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 UBE2Q2Q8WVN8 375 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 DHX38Q92620 1227 aaKnown RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 NIFKQ9BYG3 293 aaKnown RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 FHDC1Q9C0D6 1143 aaPredicted RBP5.89□□□□□ -1.47
CLIP4-211ENST00000491701 ANO2Q9NQ90 1003 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 CHMP3Q9Y3E7 222 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 USP3Q9Y6I4 520 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 SLIT3O75094 1523 aa5.89□□□□□ -1.47
CLIP4-211ENST00000491701 DLG5Q8TDM6 1919 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 PHRF1Q9P1Y6 1649 aaKnown RBP5.88□□□□□ -1.47
CLIP4-211ENST00000491701 TTC21AQ8NDW8 1320 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 BCRP11274 1271 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 RRS1Q15050 365 aaKnown RBP5.88□□□□□ -1.47
CLIP4-211ENST00000491701 ECM1Q16610 540 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 DBN1Q16643 649 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 EGFLAMQ63HQ2 1017 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 NT5DC4Q86YG4 428 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 TRIM22Q8IYM9 498 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 NEDD1Q8NHV4 660 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 VTI1AQ96AJ9 217 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 ACDQ96AP0 544 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 NGLY1Q96IV0 654 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 YTHDC1Q96MU7 727 aaKnown RBP5.88□□□□□ -1.47
CLIP4-211ENST00000491701 SLC4A9Q96Q91 983 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 TINF2Q9BSI4 451 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 SCHIP1Q9P0W5 487 aaPredicted RBP5.88□□□□□ -1.47
CLIP4-211ENST00000491701 HRH3Q9Y5N1 445 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 KIF1AQ12756 1690 aa5.88□□□□□ -1.47
CLIP4-211ENST00000491701 LTN1O94822 1766 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 MAP3K19Q56UN5 1328 aa5.87□□□□□ -1.47
CLIP4-211ENST00000491701 CDK2AP1O14519 115 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms