RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 GYG1P46976 350 aa26.13■■□□□ 1.77
CLIP2-208ENST00000491075 HABP4Q5JVS0 413 aaKnown RBP26.13■■□□□ 1.77
CLIP2-208ENST00000491075 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.13■■□□□ 1.77
CLIP2-208ENST00000491075 ALDH1L1O75891 902 aa26.12■■□□□ 1.77
CLIP2-208ENST00000491075 CRKP46108 304 aa26.12■■□□□ 1.77
CLIP2-208ENST00000491075 GTF2A2P52657 109 aa26.12■■□□□ 1.77
CLIP2-208ENST00000491075 VGLL4Q14135 290 aa26.12■■□□□ 1.77
CLIP2-208ENST00000491075 BRI3BPQ8WY22 251 aa26.12■■□□□ 1.77
CLIP2-208ENST00000491075 FAM84BQ96KN1 310 aaPredicted RBP26.12■■□□□ 1.77
CLIP2-208ENST00000491075 CSADQ9Y600 493 aa26.12■■□□□ 1.77
CLIP2-208ENST00000491075 CCL15-CCL14A0A0B4J2E2 113 aa26.11■■□□□ 1.77
CLIP2-208ENST00000491075 TCP10L2B9ZVM9 353 aa26.11■■□□□ 1.77
CLIP2-208ENST00000491075 CAP1Q01518 475 aa26.11■■□□□ 1.77
CLIP2-208ENST00000491075 TAF1CQ15572 869 aaPredicted RBP26.11■■□□□ 1.77
CLIP2-208ENST00000491075 CCL15Q16663 113 aa26.11■■□□□ 1.77
CLIP2-208ENST00000491075 CDAN1Q8IWY9 1227 aa26.11■■□□□ 1.77
CLIP2-208ENST00000491075 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.11■■□□□ 1.77
CLIP2-208ENST00000491075 TMEM39BQ9GZU3 492 aa26.11■■□□□ 1.77
CLIP2-208ENST00000491075 ZFYVE28Q9HCC9 887 aa26.11■■□□□ 1.77
CLIP2-208ENST00000491075 EN2P19622 333 aaPredicted RBP26.1■■□□□ 1.77
CLIP2-208ENST00000491075 MAP3K9P80192 1104 aa26.1■■□□□ 1.77
CLIP2-208ENST00000491075 CNKSR2Q8WXI2 1034 aa26.1■■□□□ 1.77
CLIP2-208ENST00000491075 ZNF333Q96JL9 665 aa26.1■■□□□ 1.77
CLIP2-208ENST00000491075 TMEM106CQ9BVX2 250 aa26.1■■□□□ 1.77
CLIP2-208ENST00000491075 SRCIN1Q9C0H9 1055 aa26.09■■□□□ 1.77
CLIP2-208ENST00000491075 MROH5Q6ZUA9 1318 aa26.09■■□□□ 1.77
CLIP2-208ENST00000491075 HDLBPQ00341 1268 aaKnown RBP26.08■■□□□ 1.77
CLIP2-208ENST00000491075 SLC9C1Q4G0N8 1177 aa26.08■■□□□ 1.77
CLIP2-208ENST00000491075 NBPF11Q86T75 865 aa26.08■■□□□ 1.77
CLIP2-208ENST00000491075 VPS37DQ86XT2 251 aa26.08■■□□□ 1.77
CLIP2-208ENST00000491075 OTUD5Q96G74 571 aa26.08■■□□□ 1.77
CLIP2-208ENST00000491075 PUS3Q9BZE2 481 aaKnown RBP26.08■■□□□ 1.77
CLIP2-208ENST00000491075 SALL2Q9Y467 1007 aaPredicted RBP26.08■■□□□ 1.77
CLIP2-208ENST00000491075 WDHD1O75717 1129 aaPredicted RBP26.07■■□□□ 1.76
CLIP2-208ENST00000491075 SLC4A10Q6U841 1118 aa26.07■■□□□ 1.76
CLIP2-208ENST00000491075 TBC1D22AQ8WUA7 517 aa26.07■■□□□ 1.76
CLIP2-208ENST00000491075 MRS2Q9HD23 443 aa26.07■■□□□ 1.76
CLIP2-208ENST00000491075 RIPOR2Q9Y4F9 1068 aa26.07■■□□□ 1.76
CLIP2-208ENST00000491075 SPDYE5A6NIY4 337 aa26.06■■□□□ 1.76
CLIP2-208ENST00000491075 FAM43AQ8N2R8 423 aa26.06■■□□□ 1.76
CLIP2-208ENST00000491075 SUCLG2Q96I99 432 aa26.06■■□□□ 1.76
CLIP2-208ENST00000491075 PTCH2Q9Y6C5 1203 aa26.06■■□□□ 1.76
CLIP2-208ENST00000491075 FBXO33Q7Z6M2 555 aa26.05■■□□□ 1.76
CLIP2-208ENST00000491075 TEKT1Q969V4 418 aa26.05■■□□□ 1.76
CLIP2-208ENST00000491075 KAZALD1Q96I82 304 aa26.05■■□□□ 1.76
CLIP2-208ENST00000491075 ZCCHC17Q9NP64 241 aaKnown RBP26.05■■□□□ 1.76
CLIP2-208ENST00000491075 ZSWIM8A7E2V4 1837 aa26.04■■□□□ 1.76
CLIP2-208ENST00000491075 MYH13Q9UKX3 1938 aa26.04■■□□□ 1.76
CLIP2-208ENST00000491075 GRIK5Q16478 980 aa26.04■■□□□ 1.76
CLIP2-208ENST00000491075 CAVIN4Q5BKX8 364 aa26.04■■□□□ 1.76
CLIP2-208ENST00000491075 HOOK2Q96ED9 719 aa26.04■■□□□ 1.76
CLIP2-208ENST00000491075 TMOD2Q9NZR1 351 aa26.04■■□□□ 1.76
CLIP2-208ENST00000491075 IQSEC3Q9UPP2 1182 aaPredicted RBP26.04■■□□□ 1.76
CLIP2-208ENST00000491075 FRAT2O75474 233 aaPredicted RBP26.03■■□□□ 1.76
CLIP2-208ENST00000491075 CETPP11597 493 aa26.03■■□□□ 1.76
CLIP2-208ENST00000491075 CHAF1AQ13111 956 aaPredicted RBP26.03■■□□□ 1.76
CLIP2-208ENST00000491075 ERO1BQ86YB8 467 aa26.03■■□□□ 1.76
CLIP2-208ENST00000491075 SPINK5Q9NQ38 1064 aaPredicted RBP26.03■■□□□ 1.76
CLIP2-208ENST00000491075 SNCAIPQ9Y6H5 919 aa26.03■■□□□ 1.76
CLIP2-208ENST00000491075 UTYO14607 1347 aa26.03■■□□□ 1.76
CLIP2-208ENST00000491075 FAM83AQ86UY5 434 aa26.02■■□□□ 1.76
CLIP2-208ENST00000491075 WRNIP1Q96S55 665 aa26.02■■□□□ 1.76
CLIP2-208ENST00000491075 MAST3O60307 1309 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 TLR2O60603 784 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 NBPF7P0C2Y1 421 aaPredicted RBP26.01■■□□□ 1.75
CLIP2-208ENST00000491075 CACNB3P54284 484 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 KIF22Q14807 665 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 SLC4A8Q2Y0W8 1093 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 RABL6Q3YEC7 729 aaPredicted RBP26.01■■□□□ 1.75
CLIP2-208ENST00000491075 METTL24Q5JXM2 366 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 FKBP1CQ5VVH2 108 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 ZDHHC15Q96MV8 337 aa26.01■■□□□ 1.75
CLIP2-208ENST00000491075 RPAP1Q9BWH6 1393 aaPredicted RBP26.01■■□□□ 1.75
CLIP2-208ENST00000491075 SNAPC2Q13487 334 aa26■■□□□ 1.75
CLIP2-208ENST00000491075 MRIQ9BWK5 157 aa26■■□□□ 1.75
CLIP2-208ENST00000491075 BICC1Q9H694 974 aaKnown RBP26■■□□□ 1.75
CLIP2-208ENST00000491075 GNRH1P01148 92 aa25.99■■□□□ 1.75
CLIP2-208ENST00000491075 LACTBP83111 547 aaPredicted RBP25.99■■□□□ 1.75
CLIP2-208ENST00000491075 VGLL2Q8N8G2 317 aa25.99■■□□□ 1.75
CLIP2-208ENST00000491075 SUGT1Q9Y2Z0 365 aa25.99■■□□□ 1.75
CLIP2-208ENST00000491075 BTBD19C9JJ37 291 aa25.98■■□□□ 1.75
CLIP2-208ENST00000491075 PDE8BO95263 885 aa25.98■■□□□ 1.75
CLIP2-208ENST00000491075 PPIL2Q13356 520 aa25.98■■□□□ 1.75
CLIP2-208ENST00000491075 LRRC24Q50LG9 513 aa25.98■■□□□ 1.75
CLIP2-208ENST00000491075 DCAF15Q66K64 600 aa25.98■■□□□ 1.75
CLIP2-208ENST00000491075 KIF16BQ96L93 1317 aa25.97■■□□□ 1.75
CLIP2-208ENST00000491075 IRF6O14896 467 aa25.97■■□□□ 1.75
CLIP2-208ENST00000491075 PRMT2P55345 433 aa25.97■■□□□ 1.75
CLIP2-208ENST00000491075 ZKSCAN4Q969J2 545 aaPredicted RBP25.97■■□□□ 1.75
CLIP2-208ENST00000491075 FXR1P51114 621 aaKnown RBP eCLIP25.96■■□□□ 1.75
CLIP2-208ENST00000491075 APOBEC3HQ6NTF7 200 aaKnown RBP25.96■■□□□ 1.75
CLIP2-208ENST00000491075 ARHGAP39Q9C0H5 1083 aa25.96■■□□□ 1.75
CLIP2-208ENST00000491075 HHIPL2Q6UWX4 724 aa25.95■■□□□ 1.74
CLIP2-208ENST00000491075 ANKRD44Q8N8A2 993 aa25.95■■□□□ 1.74
CLIP2-208ENST00000491075 SH3TC2Q8TF17 1288 aa25.95■■□□□ 1.74
CLIP2-208ENST00000491075 AK9Q5TCS8 1911 aa25.94■■□□□ 1.74
CLIP2-208ENST00000491075 BCAMP50895 628 aa25.94■■□□□ 1.74
CLIP2-208ENST00000491075 ZNF341Q9BYN7 854 aa25.94■■□□□ 1.74
CLIP2-208ENST00000491075 CEP290O15078 2479 aa25.93■■□□□ 1.74
CLIP2-208ENST00000491075 MYCP01106 439 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms